KEGG   Ostrea edulis (European flat oyster): 125676811
Entry
125676811         CDS       T09123                                 
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC2-like
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
oed  Ostrea edulis (European flat oyster)
Pathway
oed03020  RNA polymerase
oed03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:oed00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    125676811
  09124 Replication and repair
   03420 Nucleotide excision repair
    125676811
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:oed03021]
    125676811
   03400 DNA repair and recombination proteins [BR:oed03400]
    125676811
Transcription machinery [BR:oed03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     125676811
  RNA polymerase III system
   RNA polymerase III
     125676811
  RNA polymerase I system
   RNA polymerase I
     125676811
DNA repair and recombination proteins [BR:oed03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      125676811
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 125676811
NCBI-ProteinID: XP_048770592
LinkDB
Position
3:complement(13541189..13547143)
AA seq 128 aa
MADDEHDVDNFDDDIDDDDEPLDEAVETQEDGDQIDILPADQASQPVAPQKRITTPYLTK
YERARVLGTRALQIAMCAPVMVELEGETDPLLIAMKELKARKIPIIIRRYLPDGSYEDWG
IDELLMTE
NT seq 387 nt   +upstreamnt  +downstreamnt
atggcggacgacgaacacgatgtagacaactttgatgatgatattgatgatgatgatgaa
cctttggatgaagcagtggaaactcaggaggatggtgaccaaatagatatattaccagct
gaccaggccagtcaaccagtggcgccacagaagagaatcacaactccatacctgacaaaa
tatgaacgtgctcgagtattaggaacaagagcactgcagatagcgatgtgtgcgcctgtg
atggtggagctcgagggagaaacagatcctctgctgattgcgatgaaggaacttaaagcc
aggaagattcccatcatcattcggaggtacctacccgatggcagctacgaggactgggga
atagacgagcttttgatgacagagtga

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