Ostrea edulis (European flat oyster): 125678882
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Entry
125678882 CDS
T09123
Name
(RefSeq) neurogenic locus notch homolog protein 1-like isoform X1
KO
K02599
Notch 1
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
125678882
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
Ank_2
Ank
EGF_CA
Ank_4
Ank_3
Notch
Ank_5
EGF_2
NOD
EGF_3
Motif
Other DBs
NCBI-GeneID:
125678882
NCBI-ProteinID:
XP_048773608
LinkDB
All DBs
Position
2:89502181..89560262
Genome browser
AA seq
2462 aa
AA seq
DB search
MGHLLCLVCVLALVLDTQGFPSCLPDPCLNGGLCQTSGSKSYCICGENYVGEYCQDDNPC
RPDAHFCENNGTCRIITTADGFKGRCDCRLGYSGTLCEILDPSSVCYNNPCHYGGVCYNT
VSLKDYACLCPVGYRGVNCSMVDHCAPKPCRNQGECHALDDGYQCNCRLGYTGSTCMEDV
NECQENPNICQNGGTCDNRPGSYMCICPREYTGRHCEELYVPCQPSPCRNGGTCVQSGSL
SYQCICQSGFQGMHCETNVDDCVNSRCANGSTCVDQVNSYMCRCPPTLTGQFCEKDVDEC
RIYPNICKNGATCLNRPVGNYTCICVNGWTGHDCSRNIDDCKDNPCYNGGTCHDKVGSYY
CECPHGKTGLRCHLEDACTSSPCHEGASCETSPINGDPICSCKRGWTGSDCSVDVNECHE
SSVSPCEHGGTCVNTPGAFKCDCVVGYTGPRCESNINECLSNPCHNEGTCLDLAGMFRCI
CMPGYKGTLCEHNIDECESSPCRNGGICEDLINKFKCNCPSGFEGATCSINIDECADNPC
QNGATCVDDIDSFTCSCAHGYQGDLCQTNINDCVGVTCYNGGTCQDLLGRYECQCLQGFT
GNHCETDIDECESQPCKYGGTCHPIQNGNGYECRCPKGTTGMNCEVNFDDCKDNPCINGA
TCEDGLNNYVCRCRPGYSGDRCESNVDDCNPNPCHNGGTCRDLVNGFHCDCPYGYNDDRC
LSNVDECASNPCLNGGQCYDGVSKYTCTCPTGYEGIRCETKTNECASNPCQHQGVCHDLD
GRYRCDCAAGFAGVNCETNIDNCATNPCVHGSCTDLADNYKCHCEMQWTGKNCDTKLDPC
ASNPCFHLATCSVSADFTDFSCFCPQGLTGRHCKDDYDECLNTQCYFGGTCENSYGSFEC
KCSKGYTGRFCESNIDDCVSSPCQNGGTCYDRIANYTCLCPPGFSGYHCQNDINECASSP
CEHGSVCNDYVNSYTCTCNPGYSGTNCHINDDDCTDSSCLNGGTCHDLVNNFRCECAPGF
QGMNCEIRITPCDSNPCLEGGTCVNDKSLTSFHCVCPYGFTGPRCEAFHDWCTEGPCMNG
GTCTQSANTYRCSCPAGWTGQICDVQTITCEVAAKSKGVAVSEVCHHGGTCHNVGNTHNC
SCRPGYQGSYCETEIDECQSAPCMNGATCVDQIGEYRCICQLGFQGLNCEQNVDDCAHGP
CTNGGKCHDLDNNFTCSCLPGTRGLLCELDEKDCFVGACFHGGICIEKINGYECNCRPGY
IGPRCEGDINECLSNPCDSVGTHSCIQMVNDYRCECNVGYRGRNCSEKINFCENHPCKNG
GQCTSGDTKAICSCPEPYSGELCETEITACSSGPCLNAGICQVMEKNQFQCICPPGVGGD
TCNLDILNECNKTYNPCKNGGTCQDRMGKYECLCPRNYVGVHCERYDSSNPGVPQTTSVT
IDICVLNGCKVKAQNGLCEEECNRAQCQYDGGDCSLGVPHLYRNCFNPEYCASKYNNSEC
DHQCNVESCLYDGGDCQVHKDCNPFGNYYCDSLYNNGLCDETCNVKECNWDGSDCKKKAT
ARSPVKGTMIVYVKVSPAEFLRKRALFLRQLGLLLNVLVEIKRDANNSFMVYPWEPAVQE
RTKRFADAALEGLLQRFRRALAPSTETNGTKVFLTLDASSCIAVNVGQDCITNLDTATQV
FAVAVKNGYDTGVKVERIEMKECSDKECGDVVEPTGTTNMTYIYVAVSVAGVLIMIVVVI
FVLSRKKTAHGVTWFPEGFFMSSSGPKSTGPPRTAKRRVPDGEEMMNVKGPGCDDLNTQI
SSPAWDTDDEMCQPKAKHAKMETHSKQLEQVLSPPSTDMDNRQWTPRHLNAANIPNEQMA
LTPPYDSEHTHVNDVDVRGPGGFTPLMLASFRGNGLDTGCDNESSGSGSGESSNSGDSDD
KSVEVIQALLVQGAEINAQTDRTGETSLHLAARYARADAAKVLLDAGADCNAEDITGRTP
LHAAIAADAVGVFQILLRNRSTNLNAKAQDGTTPIILAVRMAVEGMVEELIKSDADINMT
DEYGKTALHWAAAVNNSKAAHTLLQNGANRDAQDAKDETPLFLAAREGSFETAKILLDHY
ANRDITDHMDRLPRDIAQERQHRDILRLLDEYRMSPSGMTMSNGMPASPGHIHMMQQKNS
KQKRRKNTNTPISPNGLPNGVHPKKPKTKKKSTKQGTSPSCEGSASSMETVSPGNSIESP
LRYDQTSSYEMYAQAHSMPQQSVYHIDNVTMSHSMTDDQAILQYEYKNSPGMEHMQPQWT
QPHHNPPPTYSTSITPPSQPSMNSPMGHGKMSPVKPTKNSLPTSPTHIQAMHQRARQEQR
VVHGSPHNRQNDHYVSYSSSENHLPITTMPNMYTNDSYMHQSQAIDYPQKMYIEKYPTPQ
SQSSMDSPQVRSGVALPDHYLTPSPDSPGQWSSSSPHSAHSDWSEGISSPDQPIRSNKPV
FL
NT seq
7389 nt
NT seq
+upstream
nt +downstream
nt
atggggcacttactgtgtcttgtatgtgtattggcactcgttttggacacacaaggtttc
ccgtcctgtttacctgatccctgtctgaatgggggcttatgtcaaacaagtggcagcaaa
agttattgtatatgtggtgagaattatgtaggagaatattgccaagacgataatccgtgt
cgaccggatgcccatttctgtgagaacaatggaacctgccgaatcataacaaccgctgat
ggatttaaaggacgctgtgattgcagattaggatactcgggaacactgtgtgaaatactg
gacccttctagtgtgtgttacaacaatccgtgtcattatggaggagtctgttacaacaca
gtcagcctgaaggattatgcctgcctatgtcctgtggggtacagaggggtgaattgctcc
atggtggatcactgtgcccccaaaccatgccgtaaccaaggagaatgccatgccctcgat
gacggctaccagtgcaactgtcgtctaggttacacagggtcaacgtgtatggaagacgtc
aatgaatgccaagaaaatccaaacatttgtcagaacggagggacgtgtgataatcgacca
ggatcctacatgtgtatctgtccacgggagtatacaggcagacattgtgaggagctgtat
gtaccatgccaaccctccccctgtagaaatgggggcacctgtgttcagtccggaagtctt
agttaccagtgcatatgtcagtctggtttccagggtatgcactgcgagaccaatgtagac
gattgtgtgaacagtcggtgtgctaatgggtcgacttgtgtggaccaagtcaactcgtac
atgtgcaggtgtccaccaaccctaactggacaattttgtgagaaggatgttgatgaatgt
cgcatttaccccaatatatgtaaaaacggagctacttgtttgaaccgcccagttgggaat
tacacctgtatctgtgtcaacggctggactggtcatgactgcagcaggaacattgacgac
tgtaaggacaatccgtgttataacggcgggacgtgtcacgataaagtcggatcatactac
tgtgaatgcccccacggaaagacaggcctgcgatgccatctggaggatgcatgcacaagt
agcccctgccatgagggggctagttgtgagacctcccctattaatggagaccccatctgc
tcatgtaaacgaggctggactggcagtgactgttctgtggatgtaaatgaatgccatgaa
agttctgtatcaccatgtgaacatggaggaacctgtgtgaacacacccggggcatttaag
tgtgattgtgttgtggggtacacgggcccgagatgtgaatccaacatcaacgaatgtctg
tccaatccctgccacaatgagggaacgtgtttggacctggctggaatgttccgttgcatc
tgcatgccaggatataagggaaccctgtgtgaacataatatagatgaatgtgaaagcagc
ccatgtagaaatggaggaatctgtgaagatctgatcaataaattcaagtgcaactgtcca
tcaggttttgagggagcaacgtgtagcatcaacatcgatgagtgtgctgacaatccatgc
cagaatggggcaacctgtgtagatgatattgacagtttcacttgttcctgtgcacatgga
taccagggagacctatgtcaaactaatatcaatgactgtgtgggagtcacatgctacaat
gggggcacctgccaggatcttctggggcggtacgagtgccaatgtctccagggtttcact
gggaaccactgcgagacggacattgatgaatgcgaatcccagccctgcaaatatggggga
acctgtcaccccattcagaacgggaatggatatgaatgtcgctgtcctaaaggaacgaca
ggtatgaactgcgaagtaaattttgatgattgcaaagacaacccctgtatcaatggagca
acatgtgaggatggcttaaacaactatgtgtgccgctgcaggccaggatactcaggggat
cgctgtgagagtaacgttgatgactgcaaccctaatccttgtcacaatggaggcacttgt
cgtgatctagttaatggtttccactgcgactgtccgtatggatacaatgatgatagatgt
ctgtccaacgtggacgaatgtgccagcaatccttgcttgaatggtggtcagtgttatgat
ggggtcagcaaatatacctgtacctgtcccacggggtacgagggtatccggtgtgagacg
aagaccaatgagtgtgcgtccaatccctgtcaacatcaaggggtgtgtcatgacctagat
ggaagatacagatgtgactgtgctgcgggatttgcaggtgtgaattgcgagaccaatatt
gacaactgtgctactaatccttgtgtgcatggttcatgcactgatcttgctgacaactac
aaatgtcactgtgagatgcagtggacaggcaagaactgtgacacaaagctggacccctgt
gcttccaacccctgttttcatcttgctacatgctctgtctctgcagactttaccgatttc
tcttgcttctgtccccagggcctgacaggtcgacattgtaaggatgactatgatgagtgc
ctgaacacgcagtgttattttgggggtacctgtgaaaactcatatggatcgtttgaatgc
aaatgttccaagggatacacaggccgtttctgcgagtccaacattgatgattgtgtgtcc
tccccatgtcagaatggaggcacctgttatgatcgaattgccaactacacttgcttgtgt
ccaccgggattcagtggttaccactgccagaacgatatcaacgagtgtgcatctagtcct
tgtgagcatggttctgtatgcaatgactacgttaattcgtatacctgtacctgtaatcct
gggtatagtggcactaactgccatatcaatgatgacgattgcacagacagctcctgtttg
aatggaggcacctgtcatgatctggttaataactttcgttgtgagtgtgccccgggattt
caaggaatgaactgtgagattagaattaccccctgtgattctaacccatgtttggaggga
ggtacctgtgtcaatgacaagagcctgacctcattccactgtgtgtgtccgtatggattt
actggaccaagatgtgaagcattccatgattggtgcacagaaggcccgtgtatgaatggg
ggcacctgcactcagtccgcaaatacatacagatgcagctgtcccgcaggatggacagga
cagatttgtgacgttcagaccataacctgtgaagtggcagccaaatccaaaggagtagca
gtatctgaagtctgtcatcatggaggcacctgtcataatgttggcaacacccacaactgt
tcatgtcgaccaggctatcaaggaagttactgtgaaacagaaatcgatgaatgtcagtct
gcgccgtgtatgaatggagcaacatgtgtagaccagattggagaatacagatgtatttgt
cagttgggtttccagggactgaactgtgagcagaatgtggatgactgtgctcacggtcct
tgtactaatggtgggaaatgccatgatctagacaataacttcacatgttcctgcctgcct
ggaacaagaggcctgctatgcgagctggatgagaaggactgttttgtaggggcttgtttt
catggaggcatatgcatagagaagataaatggatatgaatgtaactgtagaccgggctac
attggtcctcggtgtgagggagatattaacgagtgtctgtctaacccctgtgattctgtc
ggtacacatagttgtatacagatggtcaatgactacagatgtgaatgtaatgtgggatac
agaggtcggaactgcagtgaaaaaatcaacttctgcgaaaatcatccatgtaaaaatgga
gggcaatgtaccagtggagataccaaagccatctgttcctgtcctgagccttacagtggc
gagctgtgtgagaccgagataactgcctgcagcagtggaccgtgtctgaatgctggaatc
tgtcaggtgatggaaaagaaccagtttcagtgtatctgtccacctggggtaggaggggac
acctgtaacctggatattctcaatgagtgcaacaagacatacaacccgtgtaaaaatggg
ggcacctgtcaagacagaatgggaaaatacgaatgcttgtgccctagaaattatgtgggc
gttcattgcgagagatacgactcatccaacccgggagttccccagaccacctcagtcaca
atcgatatttgtgtgttgaacggctgcaaagttaaggctcagaatggactctgtgaggag
gagtgtaaccgggctcaatgtcaatacgacgggggggactgttcactgggagtcccacat
ctctacaggaactgcttcaaccctgagtactgcgccagcaaatacaataacagcgagtgt
gaccaccagtgtaacgtcgagagttgtctgtacgacggaggggactgtcaagtacataag
gattgcaatccatttggcaattactactgtgacagtttatacaacaatgggctgtgtgat
gagacctgtaacgtcaaggaatgtaactgggatggtagtgattgtaagaaaaaagcaact
gctcgatctcctgttaagggtaccatgattgtgtatgtcaaggtctctccggcagagttt
ctgagaaaaagggcgttattcctgcgacagcttggcttgttattgaatgtactagttgaa
atcaagagggatgctaacaatagttttatggtgtacccctgggaaccagcagtacaggaa
cggaccaaaagatttgcagatgctgcattagagggactgcttcagaggtttaggagagca
ttggcaccatctactgaaaccaacggtaccaaggtcttcctaactctggatgccagtagt
tgtattgcagttaatgtaggccaggactgtatcacaaatttggacactgctacccaggtg
tttgcagtggcagtgaaaaatggatatgacactggtgttaaagtggaaagaattgaaatg
aaagaatgcagtgataaggagtgtggtgatgtggtggaaccaacaggaaccaccaacatg
acctacatttatgtagcggtgtctgtggctggtgttcttatcatgatcgttgtggtaatc
tttgtgctgtcccgcaaaaaaacggctcatggagtgacatggttccctgagggatttttc
atgagttcctctggaccaaagtcaacagggcctccacgcaccgctaagagaagggtacct
gatggagaggaaatgatgaatgttaaaggtccgggatgtgacgacctgaatacccagatc
tcctcacctgcttgggatacggatgatgaaatgtgtcaacccaaagcaaaacatgctaag
atggagactcacagcaaacagttagaacaggtgctttctcccccatcaacagacatggac
aacagacaatggacccccaggcatctgaatgctgccaatattcctaacgaacaaatggct
ctaactcctccctatgacagtgagcacacccacgtgaatgatgtggatgttagagggcca
ggcgggttcactcccttgatgctggcctcattccgtgggaatggtctggatacaggatgt
gacaatgagtcgagtggatcaggatctggtgaaagcagtaacagtggtgactctgatgac
aagtctgtagaagtcattcaggctctgctggtacaaggggccgagatcaatgcacagaca
gacaggacaggtgagacctcccttcacctggctgctaggtatgccagggcggatgctgcc
aaggttttgttagatgccggggcagactgtaacgcagaggacatcaccgggcggactcca
ttacacgccgccattgccgctgatgccgtgggcgtcttccaaattcttttgcgcaatcga
tctacaaacttgaatgcaaaagcccaggatgggacgaccccaataatcttggctgtgaga
atggctgtagagggaatggtagaggagttgatcaagtcagatgctgacatcaacatgaca
gatgaatatggtaaaacggccctccactgggctgcagcagtgaataattcgaaggcagct
catactctgctacagaatggcgctaacagggatgcccaagacgcaaaggatgaaacgcct
ttgttcttagcagcgagagagggcagttttgaaacagccaaaatattattagatcattat
gccaatcgtgacatcacagatcacatggatcgattgccaagagacattgctcaggagaga
cagcaccgtgatattttgagactgctggatgaatacaggatgagtcctagcggtatgacc
atgtcaaatggcatgccagcatcaccaggacacatccacatgatgcaacagaaaaactcc
aaacaaaaacggaggaagaatacaaatactcctatctctcctaatggactacctaatggt
gtgcatcccaaaaagccgaaaacgaagaaaaaatcaaccaaacaggggacttcaccaagc
tgtgagggatcagcttcttcaatggagactgtgtcaccggggaactctattgagtcccct
ctgagatatgatcagactagttcttacgaaatgtatgctcaggcacatagcatgcctcag
caatctgtgtatcatatagataatgtgacaatgtctcacagcatgacagatgaccaggcc
atacttcaatatgaatacaaaaacagcccgggcatggaacacatgcagccacagtggact
cagccccaccacaaccccccacccacctactccacttctatcaccccaccatcacaaccc
tccatgaacagtcccatgggacacggtaaaatgtctccagttaaacccaccaaaaactca
ctgcccacctcccccacccacatccaggcgatgcaccaaagggcccgccaggagcagcga
gtggtccatggaagcccgcacaaccggcagaatgatcattatgtgtcgtacagcagctcg
gagaatcatctccccatcaccaccatgccaaacatgtacacaaatgactcatacatgcat
caatcacaagccattgactacccacagaaaatgtacattgaaaaataccccacccctcaa
tctcagagcagtatggactctccccaggtcagatcaggagtggcactccctgaccattac
ttgaccccatctcccgattctcctggacagtggtccagttcctccccacactccgctcat
tctgattggtcagagggtatatcgagccctgaccaacccattcgcagcaataaacctgtg
tttctctag
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