Oenococcus sp. UCMA 16435: DSM07_05005
Help
Entry
DSM07_05005 CDS
T05781
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
oen
Oenococcus sp. UCMA 16435
Pathway
oen03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
oen00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DSM07_05005 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oen03021
]
DSM07_05005 (rpoE)
03400 DNA repair and recombination proteins [BR:
oen03400
]
DSM07_05005 (rpoE)
Transcription machinery [BR:
oen03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DSM07_05005 (rpoE)
DNA repair and recombination proteins [BR:
oen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DSM07_05005 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
Motif
Other DBs
NCBI-ProteinID:
AZZ60721
LinkDB
All DBs
Position
complement(1011865..1012449)
Genome browser
AA seq
194 aa
AA seq
DB search
MVLKDYTKEQIAEFSNIELAREILNEKRKQTKFIDLLAALEKIRSEKFDEQTIVQIYTDL
NADGSFISMGENEWALRSWFAIDSINESIHEDLDEEDEKPKKKRGKKTAAVEDDVIGIDD
TDDDDDDVIDTDDDDDSDDSDDDSDDTDGSDSNDSAAGSDSDDGEIKLNTNDESLDVLKD
KNDLDDLSDGDQEV
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atggtactaaaagattacacaaaagaacaaattgcggaatttagcaacattgaattggct
cgtgagatattgaatgaaaaacgtaaacagacaaaattcattgatttgttagctgccctt
gaaaagattcgcagcgaaaaatttgatgaacaaacgatcgttcagatttacaccgattta
aatgctgatggatcttttatcagcatgggcgaaaatgaatgggctttgcgttcttggttt
gcaattgattcaatcaacgaatcaatccatgaagatcttgatgaagaagatgaaaaacca
aagaaaaagcgcggcaagaaaaccgctgcagttgaagacgatgtaatcggtattgatgat
accgacgatgacgacgacgatgtgattgataccgacgatgacgacgattctgatgatagc
gatgacgacagcgacgataccgacggttctgattcaaatgattcagcagctggaagtgac
agcgacgatggcgaaattaaattaaatacaaatgacgaaagtcttgacgtcttgaaagat
aaaaatgatcttgatgatctgagtgacggagaccaagaagtttaa
DBGET
integrated database retrieval system
