Olea europaea var. sylvestris (wild olive): 111368560
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Entry
111368560 CDS
T05244
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu03020
RNA polymerase
oeu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
111368560
09124 Replication and repair
03420 Nucleotide excision repair
111368560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oeu03021
]
111368560
03400 DNA repair and recombination proteins [BR:
oeu03400
]
111368560
Enzymes [BR:
oeu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
111368560
Transcription machinery [BR:
oeu03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
111368560
DNA repair and recombination proteins [BR:
oeu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
111368560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
111368560
NCBI-ProteinID:
XP_022845642
LinkDB
All DBs
Position
19:complement(4194056..4201546)
Genome browser
AA seq
1190 aa
AA seq
DB search
MDMEEEYYDQSYDDDEEEITQEDAWTVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDES
ADIEIRPESQHNPGHQPDFAETIYKIGFGQIYLSKPMMTESDGETATLFPKAARLRNLTY
SAPLYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLFQNSEKDLTELGE
CPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSTM
FVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQM
MELLRPSLEEAFVIQNQQVALDYIGKRGSTVGVTREKRIKYAKEILQKEMLPHVGVGEYC
ETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRA
YVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAST
LSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAA
YPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMLVKTLRRLRRRVDVNT
EVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESLDEGGWHDLVA
KGFIEYIDTEEEETTMISMTINDLVSARLNPKEAYSDTYTHCEIHPSLILGVCASIIPFP
DHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPA
GINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR
TNTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPITPDDAQGQAARYTKRDHSTSL
RHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPW
TVEGITPDIIVNPHAIPSRMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHK
CGYQMRGFETMYNGHTGRQLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEG
RSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFEC
RGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLTKDIKQSKERKKKGA
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atggacatggaggaagagtattacgatcagtcgtacgatgacgacgaggaggagataaca
caggaagacgcgtggacggtgatcagcgcctactttgaggagaagggtttggtgcgtcag
cagctcgactcattcgatgagtttattcagaacacgatgcaagaaatcgtagatgagtcc
gctgacattgaaatccgacccgaatcccagcacaaccccggtcaccagcctgacttcgcc
gagacaatttataagattggctttggtcagatatacctaagtaagcccatgatgacagaa
tcagatggagaaacagcaacgttgtttcctaaggctgcaaggttgaggaatttgacatat
tcagctcccttgtatgttgatgtcacgaagagagttatcaagaaaggtcatgatggtgaa
gaagttactgagactcaggatttcaccaaagtctttattgggaaggttcctataatgctg
cgttctagttactgtacgttatttcaaaattcagaaaaggatttgacagagctcggagag
tgtccatatgaccaaggtggttatttcatcatcaatggaagtgagaaggtgctaattgct
caggagaagatgagcaccaaccatgtatatgtgtttaaaaagaggcaaccaaataagtat
gcttatgtggcagaagtccggtctatggcagagactcaaaacaggccacccagtacgatg
tttgtcaggatgctttctcggactagtgccaaagggggttcatctggccaatatattcgt
gctacacttccatacattcgtacagagatacctattattattgtgttccgagccttagga
tttgttgctgataaagatattctggagcatatctgttatgattttgctgatacccaaatg
atggaattgttgcggccctccttggaagaagcatttgtgatacaaaatcaacaggttgct
ctagattacattggaaaaagaggatccactgttggtgtcaccagggagaagaggatcaag
tatgcaaaagagattcttcaaaaggaaatgcttcctcatgttggggttggggaatactgt
gagacaaaaaaagcttattattttgggtatattattcaccggcttctgctgtgtgctctt
ggccgaagggcagaggatgatagagatcactacggcaataagagactggatcttgctggt
cctttgctcggtggcctatttcgaatgctattccgaaagttgaccagggatgtaagagct
tatgttcagaagtgtgttgataatggaaaagatgtaaatttgcaatttgcaataaaagca
aaaactattaccagtggtcttaaatactcgcttgctactggcaactggggacaagcaaat
gcagcaggtacaagagctggagtttcacaggtgttgaatcgcttgacatatgcctcaact
ttgtcgcacttgcgaagactcaattctcccattggccgtgaaggaaaactggcaaaacct
aggcagttgcacaattcacagtggggaatgatgtgccctgcagaaacacctgaaggacaa
gcatgtggactggtgaagaatcttgcactgatggtctatataacggtcggttcagccgca
tacccaattttagaatttttggaagaatggggtaccgagaactttgaggaaatctcacca
gccgtgattccacaagcaacaaaaatctttgtgaatgggtgttgggttggtattcatcgt
gaccctgacatgttggtgaaaactctaagacgtctgagaagacgtgtggacgtgaatact
gaggttggggttgttcgagatattcgtctgaaagaattgaggatctatactgactatggc
cgctgcagtcgtccgttgtttattgtggaaaaacaaaggcttctcataaaaaagaaggat
attcaagccttgcaacaaagagaatccctggatgagggtggctggcacgaccttgttgcg
aagggctttatcgaatatatagacaccgaagaagaagaaacaactatgatttccatgaca
ataaatgatcttgtgagtgcgaggctaaatccaaaggaggcttattcagatacctatact
cattgtgagattcacccatctttgatattgggtgtttgtgcttcaatcatacccttccca
gatcataatcagtctcctcgtaacacgtatcaatcagctatgggcaagcaagcaatgggt
atttatgttactaactaccaatttcgaatggacactttggcttatgttctctactatcct
caaaaacctcttgttactactcgagctatggagcacttgcattttaggcagctacctgct
ggcatcaatgccattgttgccattgcttgctattctggatataatcaagaagattctgtc
attatgaatcagtcatcaattgaccgtggattctttcgatctctgtttttccgatcatat
agggatgaggagaagaagatggggacactggttaaagaagattttggacgtccagatcga
actaatacaatgggaatgcggcatggttcttatgataagttggatgatgatggccttgct
cctccaggaacaagagtttcaggtgaggatgtgatcattggaaagaccactcccataact
ccagatgatgcacaagggcaagcggcccgttacactaagcgtgatcacagcacgagtttg
cgccacagtgaaactgggatggtggatcaggttttgctgacaacaaacgctgatgggttg
cgatttgtcaaagtgagggtgagatcagttcgaattcctcaaattggagacaagtttagc
agcaggcatggtcagaagggaacagttggtatgacatacacacaagaagatatgccatgg
actgtggaaggcatcactcctgacatcattgtgaatccccatgctattccttctcgcatg
acgattggtcagcttattgagtgtgtcatggggaaagttgcagcgcatatgggaaaggaa
ggagatgctactccttttactgatgttaccgtggacaatatcagcaaagctcttcacaaa
tgtgggtaccagatgcgaggtttcgagaccatgtacaatggtcatacaggcaggcaactt
acagctatgatattccttggccccacttactaccagaggttgaagcacatggtggatgac
aaaatccattcccgtggcagaggccccgtacaaatcctcacaaggcaacctgctgaggga
cggtcccgtgatggtggtctccgatttggagagatggaacgagactgcatgattgcacat
ggtgctgctcactttctgaaggaaaggttgtttgaccagagtgatgcctacagggttcac
gtttgtgagcgttgtggattgattgctattgcaaatctcaagaagaattcatttgagtgc
agaggatgcaaaaacaaaactgatattgttcaggttcacattccgtatgcttgtaagcta
cttttccaggagctaatgtccatggctatagctccaagaatgctcactaaagatatcaaa
cagtccaaagagcgaaagaagaaaggagcttga
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integrated database retrieval system
