Olea europaea var. sylvestris (wild olive): 111388026
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Entry
111388026 CDS
T05244
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 3-like
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu03020
RNA polymerase
oeu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
111388026
09124 Replication and repair
03420 Nucleotide excision repair
111388026
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oeu03021
]
111388026
03400 DNA repair and recombination proteins [BR:
oeu03400
]
111388026
Transcription machinery [BR:
oeu03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
111388026
DNA repair and recombination proteins [BR:
oeu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
111388026
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
111388026
NCBI-ProteinID:
XP_022868456
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All DBs
Position
3:17990649..17995145
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AA seq
319 aa
AA seq
DB search
MEGVSYQRFPKIKIREVRDDFMKFELRETDSSIANALRRVMIAEVPTIAIDLVEIEVNSS
VLNDEFIAHRLGLIPLTSERAMGMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDV
TSKDLYSSDHTVVPVDFSDSSSGFDNSENKGIIIVKLRRGQELILRAIARKGIGKDHAKW
SPAATVTFMYEPDIYINEELMESLTPDEKREFVESSPTPVFKFDENTNQVLIHDAEAYTY
DEEVIKKAESMGKPGLVEIRAKEDCFIFTVESTGAIKASQLVLNAIDVLKQKLDAVRLSA
DTVEADEQFGELGAHMRGG
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcgtatcataccagagattcccaaagatcaaaatccgggaggttagggatgat
ttcatgaaattcgagctgcgggagacggactcaagtatcgccaacgcgctacggcgcgtg
atgattgcggaggtgccgacaatcgctatcgatttggtggaaatcgaggtgaattcctca
gtgcttaacgacgaatttattgcccaccgcctagggctcattccgcttaccagtgagcgc
gccatggggatgaggttttcacgtgactgtgatgcctgtgatggagatggtcaatgtgag
tactgctctgtggagtttcatctgagggcaaagtgtattaatgatcagacacttgatgtc
acttctaaggatttgtatagctctgaccacacggttgttcctgttgatttttcggattcg
tcttctggctttgacaactcggagaataagggaatcataattgtgaagctacgccgcggt
caggagctgattctaagagccatagctaggaagggaattggtaaagatcatgctaaatgg
tcacctgcagcaaccgtcactttcatgtatgaaccagacatttatatcaatgaagagtta
atggagagcttgactcctgatgagaaaagggagtttgttgaaagcagtcctaccccagtg
ttcaaatttgatgagaatacgaatcaggttctgattcatgatgccgaggcatatacatat
gatgaagaggtgattaagaaagctgaatcaatgggcaaaccaggcctcgtggaaatccgt
gcaaaggaagattgttttatttttacagttgagtctaccggcgctatcaaagcttctcaa
ttggttctcaatgcaatagacgtgctgaagcagaagttggatgcagttcgcttgtcagct
gatactgtggaagctgatgaacagttcggagaattgggtgcacacatgcgtgggggatga
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