KEGG   Olea europaea var. sylvestris (wild olive): 111392206
Entry
111392206         CDS       T05244                                 
Name
(RefSeq) DNA-directed RNA polymerase IV subunit 1 isoform X1
  KO
K16250  DNA-directed RNA polymerase IV subunit 1 [EC:2.7.7.6]
Organism
oeu  Olea europaea var. sylvestris (wild olive)
Pathway
oeu03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:oeu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    111392206
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:oeu03021]
    111392206
Enzymes [BR:oeu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     111392206
Transcription machinery [BR:oeu03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     111392206
SSDB
Motif
Pfam: RNA_pol_Rpb1_2 DUF3223 RNA_pol_Rpb1_3 RNA_pol_Rpb1_5 RNA_pol_Rpb1_4 RNA_pol_Rpb1_1
Other DBs
NCBI-GeneID: 111392206
NCBI-ProteinID: XP_022873254
LinkDB
Position
Unknown
AA seq 1462 aa
MDNDLDMDQQVSSGRLKGIIFSILSEEDASKISATVVGAVNEVSDPALGLPNPNSNECLT
CGAKRNRECEGHFGLINLPYTILNPYFMSEVAQILNKICPGCKFLRHHKVKKADSASIHH
QPRKCKYCTGRLRDRYPPMKFRVSSKDMFAKTAIVAEVNEKFINNSSEKVLASDYWDVIP
QDSSPEEGPLQSNIRVLSHVQVYSILKDVCPTILEAVLRRKNSIFLSSMLVTPNSHRVRE
FGHRITLDESTRMYRKLIDFRGTPNELGARVLDRYKISKIRAEKLSPMHRIYSENKSTSD
ASNTSGLKHIKELLLGKRTNHAFRMVVVGDSHIKVDEIGVPVQIAGNLLIQDHLNLWNWD
RIEPCCDFMLYQKGEISVLRNGKKLCIRSKYSLEGGDIIYRPLIDGDVLLINRPPSIHQH
SLIALYVKILPTNSVLSVNPIICSPLRGDFDGDCLHGYVPQSVDSRVELNELVGLDKQLI
NGQSGHNLLSLSHDSLTAAHLILEDGVFLNKSEMQQLQMFCHHQLQLPEAASSENSLWTG
KQLFSLLLPSDFEFVYPSNNVHISKGELVTSPNGSSWLRDSKGNLFDCLLRYRRYETLDF
LFAAQEVLCEWLSRRGLSVSLADLCLSSNPYSQKNLIDEVSCGLQEAERLSYIRLLMVSY
NQDFLVESSEENEKAVSFGKQYLSVAQQMSAALSQTSISAFKQVFRDIQNLVYQYGSSDN
SFLAMLNAGSKGNVQKLVQHSMCLGLQHSLVSLSFRIPDQLSCTSWNYQKSHCAVQKSHG
IQECSELYIPCTVVANSFRTGLNPLECFAHSLTTRDSSFSGHADVSGTITRRLMFFMRDL
VTGYDGTVRNAYGNQIVQFSYGSDAVSTTHSDSLDASNRRVYVCNSPGGHPVGSLAACAI
SEASYSALDQPVSVFEPSPLLALKKVLECGVKKSTGDKSASLFLSRRLGRWANGFEYGAL
EVKDQLERVLFSDVVSEVAIFLSSQTYISTRVCHFHIDKEVAKKKRLKLCTVIDALYMKY
DAARVKSKMHLPNLKIISKGCSESDLKYETGTKICITAALTESASNLEVELGTLREVVIP
VLLQTVIKGFSEFKKVDILWRERPNRSKFLKGSSGEVYLRIFMSEHCDRTKFWSILNDKC
YRIRNIIDWERSHPDDVHDISQFYGIDVAWKYFVESLNSAICDTGKTILPDHLVVTANCL
SATGEFVALNAKGLAQQRKETSVSSPFSQACFLNPSDCFIKAAKTGQTDRLQGSLEALAW
GQTPSIGTGGGFDIIYNGKGDEAAEPIDVYSLLSTHVGSTKHRERIKLPVKQKETPGKSV
TECLLKGKGRKNLTTDTYSQYILLDDIHRISRALQHILHEYPIDHLLTGEDKSAAMRALQ
FHPRFKEKIGTGAMEIKIGRHPKHVESRCFVLIRTDGTVEDFSYHKCIHHALEMFTPQKA
KAYRSRWLNGAIRSENCKGEPC
NT seq 4389 nt   +upstreamnt  +downstreamnt
atggacaatgacttggacatggatcagcaggtttcatcaggtcgtctgaagggaataatt
ttcagtattttatctgaggaagatgcaagcaagatatcagccaccgtcgttggagcagtc
aatgaagtgtcagatcctgcattgggactgcccaatccaaattctaatgaatgccttaca
tgtggtgctaaacgtaatagagagtgtgaaggtcattttgggttgatcaacttgccatat
acaattctcaatccatatttcatgtctgaagttgcacagattcttaataaaatctgtccc
ggatgtaaatttcttaggcaccataaggtcaagaaagctgattctgcatcaattcatcat
cagcctaggaaatgcaagtactgtactggaaggctaagagaccgttacccaccaatgaaa
tttagagtatcttccaaagatatgtttgcaaagacagcaattgttgcagaggtcaatgaa
aagttcataaataacagctccgaaaaagttttggcttctgactattgggatgtcatccct
caagattcaagcccagaagagggtcccttgcaatcaaacataagagttttatcgcatgtc
caggtttatagcatcttgaaagatgtctgcccaacgattcttgaagcagttctcagaagg
aaaaattcaatcttcctcagctctatgcttgtgactccaaatagtcatcgagtgagagaa
ttcgggcaccgtataactttggatgaaagtacaaggatgtatagaaagctgattgatttc
aggggtacaccaaatgaattgggtgctcgtgttcttgaccgttacaaaatttccaagata
cgagctgaaaagttgtcacccatgcatcgaatatattctgaaaataaatcaacaagtgat
gcttccaatacatctggcttgaaacacataaaagaacttctacttggaaaacggacaaat
catgctttccggatggttgttgttggggattcccatataaaagtggatgaaattggcgtg
ccagttcaaattgcagggaacctgttgatacaggaccatttaaatctgtggaattgggat
agaatagaaccctgctgtgatttcatgctttatcaaaagggcgaaatttctgttcttaga
aatggtaagaaactttgtattaggtccaagtactcactggagggaggagatattatatac
aggcctctcattgatggagatgttttgttgattaataggcctccatctattcaccagcat
tcccttattgcattatatgtcaaaattcttccaacaaattcggtcctctctgtcaatcct
attatttgttccccacttcgaggagactttgatggagattgtcttcatggttatgttcct
caatcagtagattctagagtagagttaaatgaacttgttggtctggataaacaactgatc
aatggacagagtggtcataaccttttgtctcttagtcatgatagtttaacagcagcacat
ttaatcctggaggatggggtttttctgaataaatctgaaatgcagcagctgcaaatgttt
tgtcatcatcagttgcaattgccagaagcagcttcatcagagaattctttgtggaccgga
aaacaattatttagcttgcttttaccgtcagattttgaatttgtttatccatctaacaat
gtccatatcagtaaaggggagcttgtaacatctcctaacggttcttcatggctacgtgac
agcaaaggcaacctgttcgactgccttctcagatatcgccgatatgaaactcttgacttc
ctgtttgctgcgcaggaagttctttgtgagtggttgtcaaggaggggattgagtgtttca
ctggcagacctttgcctttcttctaatccatactctcagaagaatcttattgatgaagtc
tcatgcggtttgcaagaagcagagaggctatcatatataaggttgcttatggtgagttat
aaccaagatttccttgttgaaagctctgaagagaatgaaaaggctgtgagttttggaaag
caatacttgtctgttgcacagcagatgtcagcagcactcagtcaaacttcaatttctgct
ttcaaacaagtctttcgggatattcaaaacttggtttatcaatatgggagtagtgataat
tcatttctggcaatgttgaacgctggtagcaaagggaatgtgcaaaaattagtccaacat
agcatgtgcctagggttgcaacattctttggtttcattatcgtttcgaatccctgatcag
ctctcttgtacttcatggaactaccaaaaaagccattgtgctgttcagaaatcccatgga
atccaagaatgttctgagttgtatatcccatgtactgtggttgcaaattctttccgaacg
ggcttaaatcctctggaatgctttgcacattcattgacaacacgtgacagttcttttagc
gggcatgctgatgtttctgggactataactcgtaggcttatgtttttcatgcgtgattta
gtcactggatatgatggaactgttagaaatgcttatgggaatcaaattgttcaattctcc
tatggttctgatgctgtttctactacccatagtgactctctagacgcctcgaataggagg
gtttatgtttgtaattcaccgggtggccatcccgttggttcattggcagcttgtgccatt
tcagaggcttcatacagtgctttggatcaaccagtcagtgtttttgaaccatcacctctg
ttagctttaaagaaagtcttggaatgtggagtaaagaagagcactggtgataaaagtgca
tcactttttttgtccagaagacttggaagatgggcaaatggttttgaatatggagcttta
gaagtcaaggatcaattggagagagtgctattctctgatgtagtctcagaagtagcaata
ttcttgtcctcccagacctacattagtacgcgggtttgtcattttcacatagacaaggaa
gttgcaaagaagaaacggctgaagttgtgtactgttattgatgctctttatatgaagtat
gatgctgctagagtgaaatcaaaaatgcatcttccaaacttgaagataataagcaagggc
tgttccgaatctgacctgaaatatgaaactggcacaaaaatttgcatcaccgctgcatta
actgaaagcgccagtaatttggaagtagaattgggtactcttcgtgaagtggttataccg
gtgctccttcaaactgttataaaaggattctccgaattcaagaaggttgatatcttatgg
agagagagaccaaatcgttcaaaatttctgaagggctcgtcaggtgaagtttatttgcgg
attttcatgtcagaacactgtgataggactaaattctggagcatcctgaacgataagtgc
taccgtataagaaatataattgattgggagcgcagtcatccggatgatgttcatgacatc
agtcagttctatgggatagatgttgcgtggaagtactttgttgaaagtttgaattctgca
atctgtgatactggcaagaccatccttccggatcatttagttgtcaccgctaattgtctt
tcggctaccggagaatttgtggccttaaatgccaaaggacttgcacagcaaaggaaggaa
acttccgtttcttcgcctttttcacaagcatgctttctgaatcctagtgattgcttcatt
aaagctgctaagactggacaaacagatcgtcttcaagggagccttgaggcattggcatgg
ggacaaactccctcgattggaactggtggtggttttgatattatatataatgggaaggga
gatgaagctgcagagcctatagatgtctatagtctgctgagtacccatgttggttctact
aaacacagagaaagaattaagttaccagtgaagcaaaaagaaacaccaggcaaatctgtc
acagagtgtctattgaaaggaaaggggcgtaaaaatttgacaacagatacatactcacaa
tatatcttactggatgacatacacaggatttcacgggcattgcagcatatactacatgag
taccctatcgatcacctgttaactggagaagacaagtctgctgcaatgagggctctacag
tttcatcctcgattcaaggagaagattggaactggtgctatggagataaagattggccgt
catccaaaacatgtggaatcacgctgctttgtactgataaggacggatggaacagtggaa
gacttttcatatcacaaatgcattcatcacgctcttgagatgttcactcctcagaaggca
aaagcttatcgttcaagatggctcaatggagcaatacgctctgaaaactgcaagggcgaa
ccttgttaa

DBGET integrated database retrieval system