KEGG   Olea europaea var. sylvestris (wild olive): 111398178
Entry
111398178         CDS       T05244                                 
Name
(RefSeq) DNA-directed RNA polymerase IV subunit 1-like
  KO
K16250  DNA-directed RNA polymerase IV subunit 1 [EC:2.7.7.6]
Organism
oeu  Olea europaea var. sylvestris (wild olive)
Pathway
oeu03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:oeu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    111398178
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:oeu03021]
    111398178
Enzymes [BR:oeu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     111398178
Transcription machinery [BR:oeu03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     111398178
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_4 RNA_pol_Rpb1_5 DUF2024
Other DBs
NCBI-GeneID: 111398178
NCBI-ProteinID: XP_022880879
LinkDB
Position
8:complement(3317252..3333258)
AA seq 761 aa
MDNDVNVDQQVTSSRLKGIIFNILSEEDASKISAIVVGAVNEVSDPALGLPNPNSNECLT
CGAKRNRECEGHFGLINLPYTILNPYFMSEVAQILNKICPGCKFLRHYKVKQKADSSSSH
HQPRNCKYCTGRLRDRYPPMKFKVSSKDMFAKTAIVAEVNEKFINNGSGKVLASDYWDCI
PQETNPEESSSQSNIRVLSHAQVYSILKDVSPMILEAVLRRRNSIFLNSLLVTPNSHRVR
EFGHRITLDESTRMYRKVIDFRXLVESSEENENAVNFGKKYLSIAQQKSAALSQTSISAF
KQVFRDIQNLVYQYGSNDNSFLAMLNAGSKGNVLKLVQHSMCLGLQHSLVSLSFRISDQL
SCASWNNHKNHSAVQKSHGIQECSESYIPCTVVANSFRMGLNPLECFAHSLTTRDSSFSG
HADVSGTITRRLMFFMRDLVTAYDGTVRNAYGNQIVQFSYVSDNFSTPHSDALDASNERV
YACNLLGGHPVGTLAACAISEASYSALDQPVSAFEPSPLLSLKKVLECGVKKSTGDKSAS
LFLSRRLGRWANGFEYGALEVKDHLERVLFSDIVSEVVIYLSSQPYISQRVCHFHIDKEV
TKKKRLKLRTVIDALYMKYDAARVKSKLHLPNLQIVSKDCSEADLQYGTGTKNCITVALT
ESASNLNVELDSLRDVVIPVLLKTVIKGFPEFKKVDILWRDRPNHSKFPKGSSGELYLRV
FMSEHCERTKFWNILIYSSNLGFRPFFLDLLSHESKRVRRL
NT seq 2286 nt   +upstreamnt  +downstreamnt
atggataatgacgtgaatgtggatcagcaagttacatcaagtcgtctaaagggaatcatt
ttcaatattttatccgaggaagatgcaagcaagatatcagccatcgtcgtcggagcagtc
aatgaagtgtcagaccctgcattgggactgcccaacccgaattcaaatgaatgccttaca
tgtggtgctaaacgtaatagagagtgtgaaggtcattttgggttgatcaacttgccatat
acaattctcaatccatacttcatgtcagaagttgcacagattcttaataaaatctgtccg
ggatgtaaatttcttaggcactataaggtcaagcagaaagctgattcctcgtctagtcat
catcagcctaggaattgcaaatactgtactggaagactaagagaccgttatccaccaatg
aaatttaaagtatcttccaaagacatgtttgcgaagacggcaattgttgcagaggtcaat
gagaagttcataaataatggctcaggaaaagttttggcttctgactattgggattgcatc
cctcaagaaacaaacccagaagagagttcctcacaatcaaacataagagttctatcacat
gcccaggtttatagcattttgaaagatgtctccccaatgattcttgaagcagttctcaga
aggagaaattcaatctttctcaactctttgcttgtgactccaaatagtcatcgcgtgaga
gaattcggccaccgtataactctggatgaaagtacaaggatgtatagaaaagtgattgat
ttcagagnccttgttgaaagctctgaagagaatgaaaatgcagtgaattttggaaagaaa
tacttgtctattgcacagcagaagtcagcagcacttagtcaaacctctatttctgctttc
aagcaagtttttcgggatattcagaacttggtttatcaatatggaagcaatgataattca
tttctggcaatgttgaatgctggtagcaaagggaacgtgctaaaattagtccaacatagc
atgtgcctaggtttgcaacattctttggtttcattatcatttcgaatctctgatcagctc
tcttgtgcttcatggaacaaccataagaaccattctgctgttcagaaatcccatggaatc
caagaatgttctgagtcatatatcccatgtactgtggttgcaaattctttccgaatgggc
ttaaatcctttggagtgctttgcacattcattgacaacacgtgatagttcttttagtggc
catgctgatgtttccgggactataactcgtaggcttatgtttttcatgcgtgatttagtc
actgcatatgatggaactgttagaaatgcttatgggaatcaaattgttcagttctcctat
gtttctgataacttttctactccccatagtgatgctcttgacgcctcaaatgagagggtt
tatgcttgtaatttgctgggtggccaccctgttggtacattggcagcttgtgccatttca
gaggcttcatacagtgctttggatcaaccagtcagtgcatttgaaccgtcacctctgtta
tctctaaagaaagtcttggaatgtggagtaaagaagagcactggtgataaaagtgcatca
ctttttttgtccagaagacttggaagatgggcgaatggatttgagtatggagcattagaa
gtcaaggatcatttggagagagtgctgttctctgatatagtctcagaagtagtgatatac
ttgtcctcccagccctacattagtcagagggtttgtcattttcacatagacaaggaagtc
acaaagaagaaaaggctgaagttgcgtactgttattgatgctctttatatgaagtatgat
gctgctagagtgaaatcaaaattgcatcttccaaacttgcagatagtaagcaaggactgt
tctgaagctgacctgcaatatggaactggcacaaaaaactgtatcacagttgcattaact
gaaagtgccagtaatttgaatgtagaactggattctcttcgtgatgtggttataccggtc
ctcctaaaaactgttataaaaggattccctgaattcaaaaaggtagatatcttatggaga
gatagaccaaaccattcaaaatttccaaagggctcttcaggtgaactttatttgcgggtt
ttcatgtctgaacactgtgaaaggactaaattctggaacatcctcatctactcatcaaat
ctagggtttcgccctttttttcttgatttgctttcacatgagtctaaacgcgtgagaagg
ctgtga

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