Olea europaea var. sylvestris (wild olive): 111399384
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Entry
111399384 CDS
T05244
Name
(RefSeq) DNA mismatch repair protein MSH7 isoform X1
KO
K08737
DNA mismatch repair protein MSH6
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
111399384
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oeu03400
]
111399384
DNA repair and recombination proteins [BR:
oeu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
111399384
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
AAA_29
Motif
Other DBs
NCBI-GeneID:
111399384
NCBI-ProteinID:
XP_022882428
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Position
9:complement(1863120..1873696)
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AA seq
1109 aa
AA seq
DB search
MQRQKSILSFLKRPAPDDKNSGGFEPEGRPAHSLQAEKPNQNAVVLNKARDVSDEEIRGT
ETPPEKLPRQIFSVNDGESTTPTRPSLFSSIKHKFMKPDTREKPSVDRFHVNDTSSGTFS
LPIKHAVPEELGNACLFPEHLSKQNGHNANETMYSEGDKERPFLINIDDDVSGPVTPGTA
PLVPRLKRVQEDMCNSKDRSDCLLPDARKRTKLIQLSNRANKVNEDVSETKSKFEWLHLS
QIRDVNRRKPDNPLYDKKTLYIPPEDLKKMSASQKQYWDVKRQYMDVVLFFKVGKFYELY
ELDAEIGHKELDWKMTQSGVGKCRQVGISESGIDEAVQKLIARGYKVGRVEQLETSEQAK
SRGAGSVIQRKLVHVLTPSTTESNIGPDAVHLLAIKEFDSMEGHLLENGSTVFGFAFVDC
AALKFSVGSISDDASCAALGALLMQVSPKEIIYEARGLSKECQKALKKYTLAGSTLSQLS
PAQPGHDFGEVLEVRNLIQSKGYFRGSCIRWDHVLDGVMHGDLALCALGGLINHLSRFKL
DDALRNGDIIPYEVYRGCLRMDGQTLVNLEIFNNNADGGPSGTLYKYLDNCMTSPGKRLL
RNWICHPLNDVEKINSRLAVVEELMSHSEIVLLLAQSLRKLPDLERLLGRAKSSMQSSAL
LSLPLIGSKVLKQRVKVFGLLVKGLRIGLELLMLLQNEGIMVSSLSKVVCLPILSGSDGL
DKFLTQFEAAVDSEFPNYQDHDVTDSESETLVILMDLFLEKATQWSQVIQAINCIDVLRS
FAVTTISSCGAMCKPMILPHSKSTNLCEETTGPILKMEGLWHPYTLGQNGGLPVSNDIQL
GGYRNDYAPCTLLLTGPNMGGKSTLLRATCLAVIMAQLGCYVPCEICVFSLVDTIFTRLG
ASDQIMTGESTFLIECTETASVLQNATHNSLVLLDELGRGTSTFDGYAIAYAVLRHLIEK
VNCRLLFATHYHLLTKEFGTHPRVALQHMATSLIPKSEMSSGVEQEIVFLYRLASGACLE
SYGMQVALMAGIPRLVVEAASKAGHVMKNKVRESFKSSEQRVKFSTLHEEWLKALLTISK
SDDNNFDTDAFDTLFCMWHELKTSYKSLN
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atgcagagacagaaatccattctctcatttctgaagagaccagcgccggatgacaaaaat
tccggcggattcgaaccggaaggccggccggcccactctttgcaggcggaaaagcctaat
caaaacgccgtcgtactaaataaagctagagatgtctcggatgaagaaataagaggaaca
gagactccaccggagaagttgccacgtcagatattctccgttaatgacggcgaaagcacc
acccccaccaggccttctctcttctcaagcattaagcacaaattcatgaaacccgacacc
agagaaaaaccttccgttgacaggttccatgtaaacgatacttcgtctggcactttctct
cttccaataaaacatgctgtaccagaagagctgggcaatgcatgtttatttcctgagcat
ctcagcaaacaaaatggtcacaatgccaatgaaaccatgtatagtgaaggagacaaagag
cgccccttcctaatcaatattgatgatgatgtttctgggccagtcacaccgggcacggca
cctcttgttcctcgtttaaagagagtccaggaggacatgtgtaattccaaggatagaagt
gattgcttattaccggatgctaggaaaagaacaaaacttattcagctgtccaatagggca
aataaagttaatgaagatgtatctgaaacgaaaagcaagtttgaatggcttcatctttct
caaatcagggatgtcaacagaagaaagccagacaatcctctttatgacaagaagacactt
tacattcctccagaggatttgaaaaagatgtcagcgtctcagaagcagtattgggatgtc
aaacgtcagtatatggatgtggtcctcttctttaaagtgggaaagttttatgagctctat
gaattagatgctgaaattggtcacaaggaacttgattggaaaatgacacaaagtggtgtt
ggaaaatgtcgacaggtcggcatatctgagagtggtattgatgaagctgttcagaagttg
atagctcgtgggtacaaggttgggcgggtggaacagctagagacatctgaacaggcaaaa
tccagaggtgctggttctgtcattcaaaggaagttggttcatgtactcacaccatctact
actgagagtaatattgggccagatgcagttcatcttctagccataaaggagtttgattca
atggagggccatttgctggagaatggatcaacagtatttgggtttgcatttgtggattgt
gctgctttaaaattttccgttggttccatcagcgatgatgcatcctgtgcagctttgggg
gctttgttaatgcaagtgtcaccaaaggaaattatatatgaagcaagagggctctccaaa
gaatgtcagaaagcgcttaaaaagtacacattagctggatcaactctgtcacaattgagt
ccagctcagcctggtcacgattttggtgaggtcttggaagttagaaatctcattcagtca
aaaggatacttcagaggatcttgcattaggtgggatcatgtactcgatggagttatgcat
ggcgatcttgcattatgcgctcttggtggacttataaatcatttatcccgatttaagtta
gatgatgccctccgtaacggtgatattataccatatgaagtctacaggggttgccttaga
atggatggccagacgctagtcaatcttgaaattttcaataataatgctgatggtggccca
tcaggcactttgtacaaatatcttgataattgcatgacatcacctggaaagcggctctta
aggaactggatatgtcatcctctcaatgacgttgaaaaaataaacagtagacttgcagta
gttgaggagctgatgtcacattcagaaattgtgttactccttgctcaatctcttcgcaag
cttccagatttggaaaggttacttgggcgtgcaaagtccagcatgcagtcttctgcttta
ctatcattgcccttgataggcagcaaagtattgaaacagcgagtaaaagtgtttgggttg
ctagttaaaggcctacgaattgggttggaactcttgatgcttttgcaaaacgaaggaatc
atggtctcgtcattgtcaaaagttgtatgccttcctattctaagtggaagtgatgggctc
gacaaatttcttacccaattcgaggcagctgtagatagtgagttccctaattatcaggac
catgatgtcacagactcggagtctgaaacattagtaattctgatggatttatttttggag
aaagccacccaatggtctcaagtcatacaggccataaactgtattgatgtactaagatct
tttgcagtcaccacaatttcttcatgtggagctatgtgtaaacctatgattttgcctcat
tctaaatccacaaacttgtgtgaagaaaccacaggccctatacttaaaatggaagggctt
tggcatccttacacccttggtcagaatgggggattaccagtgtcgaatgatatccagctt
ggaggttacagaaatgattatgctccctgcacattgcttttgactgggccaaatatgggt
ggaaagtcgacccttttacgtgccacttgtcttgctgtaataatggctcagctaggatgt
tatgtgccttgcgaaatttgtgttttttcacttgtagacaccatatttactcggcttggt
gccagtgatcaaatcatgacaggcgagagtacatttctgattgagtgcacagagacagca
tcggtcttgcaaaatgctacgcataattctcttgttcttctcgatgaattgggtcgagga
accagcacgttcgatggatatgctattgcatatgctgtactgcggcatctaattgagaag
gtgaattgccgattactgtttgctacacactatcaccttctcactaaggagtttggtact
catcctcgggttgcattgcaacacatggccacttctttgataccaaaatctgaaatgtct
tctggagtcgagcaggagatagttttcctatatcgactagcctctggagcatgcttagaa
agctacgggatgcaagtagctctcatggcagggattcctcgactggtagttgaagcagct
tcaaaggctggtcatgttatgaaaaataaggttagagaaagtttcaagtcaagtgagcaa
agggtaaagttctcaacactgcacgaagagtggttgaaggcccttttaacaatttcaaag
tcagatgataataattttgatactgatgcgtttgatacattattttgcatgtggcatgag
ctgaaaacctcttataagtcacttaattga
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