KEGG   Olea europaea var. sylvestris (wild olive): 111406088
Entry
111406088         CDS       T05244                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 6A-like
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
oeu  Olea europaea var. sylvestris (wild olive)
Pathway
oeu03020  RNA polymerase
oeu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:oeu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    111406088
  09124 Replication and repair
   03420 Nucleotide excision repair
    111406088
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:oeu03021]
    111406088
   03400 DNA repair and recombination proteins [BR:oeu03400]
    111406088
Transcription machinery [BR:oeu03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     111406088
  RNA polymerase III system
   RNA polymerase III
     111406088
  RNA polymerase I system
   RNA polymerase I
     111406088
DNA repair and recombination proteins [BR:oeu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      111406088
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 111406088
NCBI-ProteinID: XP_022891056
LinkDB
Position
12:complement(22188008..22188932)
AA seq 175 aa
MADEDYDMDGGYEDEPIEPEPDEGVELEEENNEDAPDDIVGEGEEKQEVEPVERPRKTSK
YMTKYERARILGTRALQISMNAPVMVELEGETDPLEVKLGIMIMNLLASIFLLPLLICFI
DPLTERLSPCLAPYSKSSIFFFLFFFIHPHIRWESTTFINFSIKHFINFFFIKIY
NT seq 528 nt   +upstreamnt  +downstreamnt
atggcagatgaggactacgacatggacgggggatacgaagatgagccaattgaaccggaa
cccgatgaaggtgtagagttggaagaagagaacaatgaagatgctccagatgacattgta
ggcgaaggcgaagagaaacaggaggtcgaaccagttgaacgccctcggaaaacgtccaag
tatatgaccaaatacgagcgtgcgaggattttgggtacgcgggcgttgcagataagcatg
aatgctccagtgatggttgagttggagggcgaaacggatccacttgaggtaaaattggga
ataatgataatgaatttattagcttccattttcttgttacctttgcttatatgctttatt
gatcccttgactgaaaggctaagcccctgtttggccccatattctaaaagctcgatcttc
ttttttctttttttttttatccatccacacattcgatgggaaagcacaacatttattaac
ttttcaatcaaacatttcatcaattttttttttatcaaaatctactaa

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