Oxalobacter formigenes: BRW83_0006
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Entry
BRW83_0006 CDS
T04835
Symbol
rsmD
Name
(GenBank) Ribosomal RNA small subunit methyltransferase D
KO
K08316
16S rRNA (guanine966-N2)-methyltransferase [EC:
2.1.1.171
]
Organism
ofo
Oxalobacter formigenes
Brite
KEGG Orthology (KO) [BR:
ofo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ofo03009
]
BRW83_0006 (rsmD)
Enzymes [BR:
ofo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.171 16S rRNA (guanine966-N2)-methyltransferase
BRW83_0006 (rsmD)
Ribosome biogenesis [BR:
ofo03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
BRW83_0006 (rsmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cons_hypoth95
Methyltransf_31
MTS
Methyltransf_25
MethyltransfD12
Methyltransf_3
Methyltransf_15
Methyltrans_SAM
Methyltr_RsmB-F
Methyltransf_24
RsmJ
DNA_methylase
Methyltransf_23
TRM
Spermine_synth
Methyltransf_12
GSH-S_N
SF3b1
Methyltransf_9
Motif
Other DBs
NCBI-ProteinID:
ARQ44783
LinkDB
All DBs
Position
complement(4492..5151)
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AA seq
219 aa
AA seq
DB search
MTVSKRMALKKDKTKTSSKITVHQVRIVGGIWKRTPLAVADVPGLRPTPDRVRETLFNWL
THLKGNTFSRMRCLDLFAGTGALSFEAASRGFSQVVTVEESRTAYSHLEAVKKKLNAEQV
KIVHADAFAFADRLIEANERFDVIFLDPPFQENFLPVILPMCVKLLSDGGLIYVESNEAV
SDEKLDQLLPEGQKCHICRENKAGQVYYHLLEMKASGQS
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgacggtatcaaagagaatggcattaaaaaaagacaaaacaaaaacttcttccaaaata
acggttcatcaggtccggattgtcggtggcatctggaaacgaacgccactggcggttgca
gacgtacctggactcaggccgaccccggatcgggtaagagaaacgcttttcaactggctc
acgcatttaaagggaaacacattcagccggatgcgttgtctggatttgtttgccgggacg
ggggcattgagttttgaagcggccagccgtggtttttcgcaagtggtgacagttgaagaa
agccggacagcttattcccatctggaagcggtcaaaaaaaagttgaatgccgaacaggta
aaaatcgttcatgccgatgccttcgcttttgctgatcggcttattgaggcaaacgagcgg
tttgatgtgatttttctcgatccgccttttcaggaaaattttttacccgtgattttgccg
atgtgtgtcaaacttctttctgacggaggattgatttacgttgagtcgaatgaagccgtc
agcgatgaaaaactggatcaattattgccggaagggcaaaaatgtcacatttgcagggaa
aataaagccggtcaggtttattatcatcttcttgaaatgaaggcatcaggccaatcttga
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