KEGG   Oryza glaberrima (African rice): 127758155
Entry
127758155         CDS       T08853                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 9B
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
ogl  Oryza glaberrima (African rice)
Pathway
ogl03020  RNA polymerase
ogl03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ogl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    127758155
  09124 Replication and repair
   03420 Nucleotide excision repair
    127758155
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ogl03021]
    127758155
   03400 DNA repair and recombination proteins [BR:ogl03400]
    127758155
Transcription machinery [BR:ogl03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     127758155
DNA repair and recombination proteins [BR:ogl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      127758155
SSDB
Motif
Pfam: TFIIS_C RNA_POL_M_15KD CpXC
Other DBs
NCBI-GeneID: 127758155
NCBI-ProteinID: XP_052139737
LinkDB
Position
12:20718020..20719337
AA seq 114 aa
MSTMKFCRECNNILYPKEDRDQKILLYACRNCDHQEVADNNCVYRNVVHHSAGEFTQVLQ
DVAGDPTLPRTKAVRCAVCGHGEAVFFQATARGEEGMTLFFVCCNPSCGHRWRE
NT seq 345 nt   +upstreamnt  +downstreamnt
atgagtaccatgaaattttgccgcgaatgcaacaacatactgtatcccaaggaggatagg
gaccagaagattctgctctatgcctgcaggaactgtgaccaccaggaggttgcagacaac
aactgcgtctaccggaatgtggtgcaccacagcgccggagagttcacccaggtgctccag
gatgtcgccggcgatccgactctccctcgcaccaaggcggtccggtgcgcggtctgtggc
cacggcgaggccgtgttcttccaggccactgccagaggggaggaagggatgaccctgttc
ttcgtctgctgcaacccgagctgcggtcacagatggagagaatga

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