Oryza glaberrima (African rice): 127763446
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Entry
127763446 CDS
T08853
Name
(RefSeq) lycopene beta cyclase, chloroplastic
KO
K06443
lycopene beta-cyclase [EC:
5.5.1.19
]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl00906
Carotenoid biosynthesis
ogl01100
Metabolic pathways
ogl01110
Biosynthesis of secondary metabolites
Module
ogl_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
127763446
Enzymes [BR:
ogl01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.19 lycopene beta-cyclase
127763446
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GFIT
Motif
Pfam:
Lycopene_cycl
Pyr_redox_2
DAO
Pyr_redox
FAD_binding_2
FAD_oxidored
Thi4
FAD_binding_3
NAD_binding_8
HI0933_like
NAD_binding_9
Pyr_redox_3
3HCDH_N
GIDA
XdhC_C
Motif
Other DBs
NCBI-GeneID:
127763446
NCBI-ProteinID:
XP_052144109
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Position
2:complement(4781512..4783465)
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AA seq
489 aa
AA seq
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MATTALLLRAHPSCKPPPPPSPSPRPTRALVCRAAAAGEALRSLAPPSRPELLSLDLPRY
DPARSTPVDLAVVGGGPAGLAVAQRVAEAGLSVCAIDPSPALVWPNNYGVWVDEFDAMGL
SHCLDAVWPSATVFTHDDGAAKSLHRPYARVARRKLKSTMMDRCVAHGVTFHKARVVKAV
HGEASSLLICDDGVAVPATVVLDATGFSRCLVQYDKPYDPGYQVAYGILAEVDGHPFDID
KMLFMDWRDAHLPEGSEIRERNRRIPTFLYAMPFSPTRIFLEETSLVARPGLAMDDIQER
MAARLRHLGIRVRAVEEDERCVIPMGGPLPVLPQRVVGIGGTAGMVHPSTGYMVARTLAT
APIVADAIVRFLDTGSGDSAFAGDALSAEVWRELWPAQRRRQREFFCFGMDILLKLDLDG
TRRFFDAFFDLEPRYWHGFLSSRLFLPELAMFGLSLFAKASNTSRLEIMAKGTAPLAKMI
GNLIQDRDR
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggccaccaccgccctcctcctccgcgcccacccctcctgcaagccccctccccctccc
tcgccgtcgccgcgccccacgcgcgcgctcgtctgccgcgccgccgccgccggcgaggcg
ctgcggtcgctggccccgccgtcacgccccgagctgctctccctcgacctcccccgctac
gaccccgcccgctccacccccgtcgacctcgccgtcgtcggcggcggccccgccggcctc
gccgtcgcgcagcgcgtcgcggaggcgggcctctccgtctgcgccatcgacccctccccc
gccctcgtctggcccaacaactacggcgtctgggtcgacgagttcgacgccatgggactc
tcccactgcctcgacgccgtctggccctccgccaccgtcttcacccacgacgacggcgcc
gccaagtcgctccaccgcccctacgcccgcgtcgcccgccgcaagctcaagtccaccatg
atggaccgctgcgtcgcccatggcgtcacgttccacaaggccagggtcgtcaaggccgtc
cacggcgaggcatcctccctcctcatctgcgacgacggcgtcgccgtcccggccaccgtc
gtgctcgacgccacggggttctcccggtgcctcgtccagtacgacaagccgtacgacccg
gggtaccaggtcgcctatggcatcctcgccgaggtggacggacacccgttcgacatcgac
aagatgctgttcatggactggcgcgacgcgcacctccccgaggggtccgagatcagggag
cgcaaccgccgcatcccgacgttcctctacgccatgcccttctccccgacgaggatcttc
ctcgaggagacctccctcgtggcgcgcccgggcctcgccatggacgacatccaggagcgc
atggcggcgaggctgcgccacctcgggatacgcgtccgcgccgtggaggaggacgagcgg
tgcgtcatccccatgggcggcccgctcccggtgctcccgcagcgggtcgtcggcatcggc
ggcaccgccgggatggtgcacccgtccacgggctacatggtggcgcgcaccctcgccacc
gcgcccatcgtggcggacgccatcgtgcgcttcctcgacaccggcagcggcgacagcgcg
ttcgccggcgacgcgctgtcggcggaggtgtggagggagctgtggccggcgcagaggagg
aggcagagggagttcttctgcttcggcatggacatcctcctcaagctcgacctcgacggc
acgcggcgattcttcgacgccttcttcgacctggagccgcgctactggcacggcttcctg
tcgtcgaggctcttcttgccggagctcgccatgtttggcctctccctcttcgccaaggcc
tccaacacgtcgcgcctcgagatcatggccaagggcaccgcccctctcgccaagatgatc
ggcaacctcatccaggacagagataggtga
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