KEGG   Oryza glaberrima (African rice): 127767799
Entry
127767799         CDS       T08853                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 9B-like
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
ogl  Oryza glaberrima (African rice)
Pathway
ogl03020  RNA polymerase
ogl03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ogl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    127767799
  09124 Replication and repair
   03420 Nucleotide excision repair
    127767799
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ogl03021]
    127767799
   03400 DNA repair and recombination proteins [BR:ogl03400]
    127767799
Transcription machinery [BR:ogl03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     127767799
DNA repair and recombination proteins [BR:ogl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      127767799
SSDB
Motif
Pfam: TFIIS_C RNA_POL_M_15KD Lep_receptor_Ig CpXC zinc_ribbon_4 DNA_RNApol_7kD
Other DBs
NCBI-GeneID: 127767799
NCBI-ProteinID: XP_052149203
LinkDB
Position
3:119552..120352
AA seq 114 aa
MSTMKFCRECNNILYPKEEKDRRLLLFACRNCEHQEVSESKCVYRNEVAHAAGERTQVLQ
DVASDPTLPRTKTVRCAACGHGEAVFFQATARGEEGMTLFFVCCNLTCAHRWRE
NT seq 345 nt   +upstreamnt  +downstreamnt
atgagcaccatgaagttttgccgcgagtgcaacaacatcctgtaccctaaggaggagaag
gaccggcggctgctgctgttcgcgtgccggaactgcgagcaccaggaggtatcggagagc
aagtgcgtgtatcggaacgaggtggcgcacgcggccggggagcggacgcaggtgctgcag
gacgtggcgtcggacccgacactgccgcgcacaaagacggtgaggtgcgccgcctgcggg
cacggcgaggccgtcttcttccaggccaccgcccgcggcgaggagggcatgaccctcttc
ttcgtctgctgcaacctcacctgcgcccaccgatggagggaatga

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