Oryza glaberrima (African rice): 127768618
Help
Entry
127768618 CDS
T08853
Name
(RefSeq) long chain base biosynthesis protein 1a isoform X1
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl00600
Sphingolipid metabolism
ogl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
127768618
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ogl01007
]
127768618
Enzymes [BR:
ogl01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
127768618
Amino acid related enzymes [BR:
ogl01007
]
Aminotransferase (transaminase)
Class II
127768618
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Cys_Met_Meta_PP
OKR_DC_1
Motif
Other DBs
NCBI-GeneID:
127768618
NCBI-ProteinID:
XP_052150193
LinkDB
All DBs
Position
3:complement(7636194..7641413)
Genome browser
AA seq
495 aa
AA seq
DB search
MDMALPVVNATAAVLARVSAAFNAPFARAVVFGVHIDGHLVVEGLLIAVIVFQLSRKSYK
PPKKPLGEKEIDELCDEWEPEPLCLPIKDGARIDTPMLESAAAPHTTIDGKEVINFASAN
YLGLIGNEKIIDSCVGSLEKYGVGSCGPRGFYGTIDVHLDCEAKIAKFLGTPDSILYSYG
ISTIFSVIPAFCKKGDIIVADEGVHWAVQNGLHLSRSTVVYFKHNDMASLANTLEKLTRG
NKRAEKIRRYIVVESIYQNSGQIAPLDEIVRLKEKYRFRVILEESHSFGVLGQSGRGLAE
HYGVPIDKIDIITAGMGNALATDGGFCTGSVRVVDHQRLSSSGYVFSASLPPYLASAAVS
AVSYLEGNPSVLADLRSNISFLHKELSGTPGLEISSHVLSPIVFLKLKKSTGSSNTDIDL
LETIAERVLKEDSVFIVASKRSPLDRCKLPVGIRLFMSAGHTDSDISKVSSSLKRVSASV
PMIPVAAHTCKHFEK
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggacatggcattgccagtagtgaatgccaccgcagcggtgcttgctcgtgtctcagct
gcattcaatgccccttttgcccgtgcggttgtctttggggttcatatcgatgggcacctg
gttgttgaagggctccttatagcggtcatagtgtttcagctttctaggaagagctacaaa
ccgcccaagaagccactcggtgaaaaggagattgacgagctatgtgatgaatgggagcca
gaacctctgtgtcttccgatcaaggatggggcccgaattgacacaccaatgttggaaagt
gctgctgctccacatacaaccattgatgggaaagaagttataaactttgcatcagcaaat
tatcttggtttgattggcaatgagaagattattgattcttgtgttggttcactggagaaa
tatggtgttggttcttgtggtccacgtggcttttatggaacaattgatgtccaccttgac
tgtgaggcaaaaatagcgaagtttcttggaactccagactcaattctgtattcatatggg
atttctacaatatttagtgtgatacctgccttttgtaagaaaggagacatcatagttgct
gatgaaggtgtgcactgggcagtgcaaaatggtcttcatctgtcaagaagcactgttgtt
tattttaaacacaatgatatggcttcacttgcaaacactttggaaaaacttacacgtgga
aataaacgagcagaaaagatcagacgatacattgttgtagaatctatctaccagaattct
ggtcaaattgctcccttggatgagattgtcagattgaaggagaaatatcgattccgtgtt
attctggaggaaagccattcttttggtgtgcttggccagtctggacgaggccttgctgaa
cattatggagttccaattgacaaaattgatattatcactgctggaatggggaatgcatta
gctactgatggtggcttttgtacaggaagtgttagagttgttgatcatcagcgtctaagc
agttctggctatgttttctcggcttctctgccaccttatcttgccagcgctgcggtttct
gctgtcagctacctggaggggaacccgtcagttcttgcagacctgaggagcaacatttct
ttcctgcataaagaactgtcaggtactccaggacttgaaatttccagccatgttctgtca
cctatcgttttcctcaaactgaagaaatcgacgggttcatcaaacaccgatatagatctt
cttgaaactattgctgagagggtattgaaggaagattcagtttttatcgtggcgtcaaag
cggtcacctttggataggtgcaaacttcccgtcggaatacgcctcttcatgtcagccggc
cacaccgattcagacatctccaaagtgtcctcatccttgaagcgggtctcagcatcagtt
ccgatgattcccgttgccgctcatacttgcaaacacttcgaaaaatag
DBGET
integrated database retrieval system
