Oryza glaberrima (African rice): 127773539
Help
Entry
127773539 CDS
T08853
Name
(RefSeq) glutamine--tRNA ligase-like
KO
K01886
glutaminyl-tRNA synthetase [EC:
6.1.1.18
]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl00970
Aminoacyl-tRNA biosynthesis
ogl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
127773539
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ogl01007
]
127773539
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ogl03016
]
127773539
Enzymes [BR:
ogl01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.18 glutamine---tRNA ligase
127773539
Amino acid related enzymes [BR:
ogl01007
]
Aminoacyl-tRNA synthetase
Class I (A)
127773539
Transfer RNA biogenesis [BR:
ogl03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
127773539
Prokaryotic type
Other AARSs
127773539
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1c
tRNA_synt_1c_R1
tRNA-synt_1c_C
tRNA-synt_1c_C2
tRNA_synt_1c_R2
UDG-inhib_P56
Motif
Other DBs
NCBI-GeneID:
127773539
NCBI-ProteinID:
XP_052155598
LinkDB
All DBs
Position
5:complement(4125534..4130527)
Genome browser
AA seq
792 aa
AA seq
DB search
MATGEAAAPPELASFLAIGLDQRTAENALANRKVTANLAAVIAEAGVSGCDKSVGNLLYT
VATKYPANALVHRPVVIQYIVSSKIKTPAQLDAALSFLSTLGPDPLDTAKFEETCGVGVV
VSTEEIQSMVTDILKENMEAIVEQRYHINVGSLCGQVRKWHPWGDAKFIKEEIDKRLTEI
LGPKTEADNVKPVKKKKEKPAKVEEKKTAVAAPAPPSEEELNPYSIFPQPEENLKVHTEI
FFSDGNIWRAHNRKDILEKHLKATGGKVMTRFPPEPNGYLHIGHAKAMFIDFGLAKERNG
HCYLRFDDTNPEAEKKEYIDHIQEIVRWMGWEPYKVTYTSDYFQELYELAVCLIKKGLAY
VDHQTPEEIKEYREKQMNSPWRDRPIEESLKLFEDMRHGLVAEGKATLRMKQDMQNDNKN
MADLIAYRIKFTPHPHAGDKWFIYPSYDYAHCLVDSLENITHSLCTLEFDIRRPSYYWLL
VALDQYQPYVWEYSRLNISNNVMSKRKLNKLVTEKWVDGWDDPRLLTLAGLRRRGVSSTA
INSFIRGMGITRSDNSLIRVERLEYHIREELNKVAPRAMVVLHPLKVVITNLDYGTIIDL
DAKKWPDAPGDDASAYYKVPFSRTVYIEQSDFRVKDSKDYYGLAPGKTVLLRYAFPIKCT
EVIYGDNSDNIIEIRAEYDPSKATKPKGVLHWVAEPSPGVNPLKVEIRLFEKLFLSENPV
ELEDWLGDLNPRSKEVIKGAYAVPSLATAALGDKFQFERLGYFAVDSDSTAEELVFNRTV
TLRDSYGKAGPK
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccggagaggcggcggcgccgccggagctggcgtcgttcctggccatcgggctt
gaccagcgcacggcggagaacgccctcgccaaccgcaaggtcaccgccaacctcgccgcc
gtcatcgccgaggctggtgttagtgggtgtgacaaatctgtggggaatcttctctacact
gtcgcgacgaagtatccggcgaatgccctggtgcatcgtcccgttgtcatccaatacatt
gtgtcgtcaaagatcaagacccccgcgcaattagatgctgctctgtcgtttctttctact
ttgggtcctgatccattggacacagcaaagtttgaagagacatgtggagtgggggtggtt
gtttcaactgaagagattcagtcaatggtcactgatatcctgaaggaaaacatggaagcc
atagttgaacagcgatatcatataaatgttggcagcttgtgcggacaggttaggaagtgg
cacccctggggcgatgctaagttcataaaggaggaaattgataaaaggcttacagagatt
cttggtccaaagacagaagctgacaatgtaaagcctgtgaaaaagaagaaggagaagccc
gcaaaagttgaggagaaaaaaactgcggtagctgctcctgctccaccatctgaggaagaa
cttaatccctactccatatttcctcaaccggaggaaaacttaaaggtccatacagaaatt
ttcttcagcgatggaaatatatggagagcacacaacagaaaggacattttagagaaacat
cttaaagcaactggaggaaaagtgatgacccgctttcccccagagcctaatggctacctt
catattggtcatgctaaggctatgtttattgattttggactggctaaagagcgcaacgga
cattgttaccttaggtttgatgatacaaaccctgaggcggagaagaaagaatatatagat
cacattcaagaaattgtccgatggatgggctgggagccttataaagttacctatacaagt
gactatttccaagaattatatgaacttgctgtttgtttgataaagaagggactagcttat
gtcgatcaccagacaccagaagagataaaggagtatagagaaaagcaaatgaatagtcca
tggagggataggcctatagaagagtcactgaaactgtttgaagatatgaggcatgggttg
gttgctgagggaaaggcaactcttaggatgaaacaagacatgcagaatgataacaagaac
atggctgacttaatagcatatagaataaagtttacacctcatccccatgctggcgacaag
tggtttatctatccaagctatgactatgctcattgtttggttgactctcttgaaaacatt
acccattcgttgtgcacactagaatttgacatacgtcgtccttcatactactggctgctc
gtagccctggaccagtaccagccatatgtttgggaatattcaaggttaaacatatcaaac
aatgttatgtccaagcgaaagctaaataaacttgtgacagagaagtgggtagatgggtgg
gatgatcctcgcctgttgacacttgcaggactacggcggagaggagtatcatcaacagca
attaactcctttattcgtggaatgggcataacaaggagtgacaacagtttgatacgcgta
gaacgccttgagtatcatattagagaagagctcaacaaagtagctcctcgtgctatggtt
gttttgcatcccctaaaggttgttataactaatttagactatggaacaataatagacctt
gatgcaaaaaagtggcccgatgctccaggagatgatgcttcggcctattacaaggttcca
ttctcaagaactgtctacatcgagcagtctgattttcgtgtaaaggattcaaaagattat
tatgggcttgctcctggtaaaacagtactactaaggtatgcattcccaataaaatgtacg
gaagttatctatggtgataattcagataatatcattgaaatccgagcggagtatgaccct
tcgaaggctacaaaaccaaagggtgtgttgcactgggttgccgaaccttctccaggtgtt
aacccgctcaaagtggaaatcagattgttcgagaaattatttctttcagagaatcctgtg
gagcttgaggattggctgggtgatctcaacccacgatcaaaggaagtgataaagggtgcc
tatgccgtgccttcgcttgcaactgcagcgctgggggacaaatttcagtttgaacgcctc
ggttactttgctgtggattccgactcgacggctgaggaacttgtgttcaacagaaccgtt
actctacgggattcctatggaaaagctggacccaagtga
DBGET
integrated database retrieval system
