Oryza glaberrima (African rice): 127773700
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Entry
127773700 CDS
T08853
Name
(RefSeq) ABC transporter B family member 21-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
127773700
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ogl02000
]
127773700
04147 Exosome [BR:
ogl04147
]
127773700
04090 CD molecules [BR:
ogl04090
]
127773700
Enzymes [BR:
ogl01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
127773700
Transporters [BR:
ogl02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
127773700
Exosome [BR:
ogl04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
127773700
CD molecules [BR:
ogl04090
]
Proteins
127773700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_22
AAA_16
ABC_ATPase
Zeta_toxin
AAA_21
RsgA_GTPase
AAA_30
AAA_15
DUF87
DEAD
AAA_7
DUF815
G-alpha
TRAM
Motif
Other DBs
NCBI-GeneID:
127773700
NCBI-ProteinID:
XP_052155796
LinkDB
All DBs
Position
5:1881096..1887325
Genome browser
AA seq
1290 aa
AA seq
DB search
MVDCSLVLRILGLQSMSESSRAFGVNASSSSSGGGGGEAVAGTTGKNGGGGSVAFHRLFA
FADGTDAALMLLGTLGAVANGAALPFMTVLFGGLIDAFGGAAGGDVVARVSEVSLQFIYL
AVASAAASFIQVACWMITGERQAARIRSLYLRTILRQEVAFFDKHTNTGEVVGRMSGDTV
LIQDAMGEKVGKFVQLLVTFLGGFGVAFAQGWLLTLVMLATIPPLVLSGAVMSNVVARMA
SLGQAAYADASVVVEQTIGSIRTVASFTGEKQAVAKYSRSLKRTYSSGVREGLAAGVGMG
TVMVLLFCGYSLGIWYGAKLILEKGYTGAQVMNVIFAVLTGSLALGQASPSMKAFAGGQA
AAYKMFETINREPEIDAYSATGRKLDDIQGDIEFRNVYFSYPTRPDEQIFRGFSLAIQSG
TTVALVGQSGSGKSTVISLIERFYDPQLGEVLIDGVNLKELQLRWIRSKIGLVSQEPVLF
AASIRDNIAYGRDNATNQEIRAAAELANASKFIDKMPQGFATLVGEHGTQLSGGQKQRIA
IARAILKDPRILLLDEATSALDTESERIVQEALDRVMSNRTTVIVAHRLTTVRNADTIAV
IHQGSIVEKGSHHELISDPDGAYSQLIRLQENSHDSEDANYQNKSGKKSDSGIRSGKQSF
SYQSTPQRSSRDNSNNHSFSVSATPLEIDVQGGSPKKIAEETPQEVPLSRLAALNKPEIP
VLLLGSVASAVSGVIFPIFAILLSNVIKAFYEPPQVLKKDAEFWSSMFLVFGAVYFLSLP
IGSYLFSVAGCRLIRRIRLMTFEKVVNMEIEWFDHPENSSGSIGARLSADAAKIRGLVGD
ALQLVVQNLATLVAGLLIAFISNWELSLIILALIPLIGVNGWIQMKFIQGFSADAKMMYE
EASQVANDAVSSIRTVASFSAEEKVMDLYKMKCEGPLRTGIRTAIISGIGFGVSIFLLFG
VYAASFYAGARLVEDRKTTFPNVFRVFLALTMAAIGVSHTSNLTSDSSKAKSAVSSIFAI
VDRKSRIDPSDDAGVSLEPLRGDIEFQHVSFRYPTRPDVQIFEDLCLTIQSGKTVALVGE
SGSGKSTAISLLQRFYDPDAGHILLDGVDIQKFQLRWLRQQMGLVSQEPALFNDTIRANI
AYGKEGDATESDIVSSAQLANAHKFISSLHQGYETMVGERGAQLSGGQKQRIAIARAIVK
DPKILLLDEATSALDAESERVVQDALDRVMMNRTTVIVAHRLSTIQGADMIAVVKNGMII
EKGKHDALIGIKDGAYASLVALHVSAAAIS
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
atggtggattgtagtttggtgttgcgaatcttgggtttgcagagcatgtcggagtcgagc
agggcgttcggggtgaatgcgtcgtcgtcgtcgtccggcggcggcggcggcgaggcggtg
gctggaacgacggggaagaatggtggcggggggagcgtggcgttccaccggctgttcgcg
ttcgcggacggcacggacgcggcgctgatgctgctcgggacgctgggcgcggtggcgaac
ggcgccgcgctgccgttcatgaccgtgctgttcggcggcctcatcgacgccttcggcggc
gccgcgggcggcgacgtcgtggcgcgcgtctccgaggtgtcgctccagttcatctacctc
gccgtcgcctcggccgccgcgtcgttcatccaggtggcgtgctggatgatcaccggcgag
cggcaggcggcgcggatacggagtctgtacctgaggacgatactccggcaggaggtcgcc
ttcttcgacaagcacaccaacaccggcgaggtggtgggcaggatgtccggcgacacggtg
ctgatccaggacgccatgggggagaaggtgggcaagttcgtccagctcctcgtcacgttc
ctgggcggcttcggcgtggcgttcgcgcaggggtggctcctcaccctcgtcatgctcgcc
accatcccgccgctcgtcctctccggcgccgtcatgtccaatgtcgtcgccaggatggcg
tcgctcggccaggccgcctacgccgacgcctccgtcgtcgtcgagcagaccatcggctcc
atcagaacagttgcgtcgttcaccggcgagaagcaggcggtggcgaagtacagcaggtca
ctgaagagaacgtacagctccggcgtcagggaggggctcgccgccggcgtgggcatgggc
acggtgatggtgctcctcttctgtggctactcattggggatttggtacggtgccaagctg
attctggagaagggatacaccggagctcaggtcatgaatgtcatcttcgccgtgctcacc
ggctcgctagctctaggtcaggcatcaccaagcatgaaagcattcgcgggagggcaggct
gcggcatacaagatgtttgagacaatcaacagggagccagagatcgatgcgtacagcgcc
acaggtaggaagctagatgacattcagggggatatcgagttcagaaacgtttacttttcg
tacccgacaaggcccgatgagcaaatattcagagggttctcgcttgccatacagagtgga
acaactgttgcattggttggacagagtgggagtggaaaatcaacagtcatcagcttaatc
gagcggttttacgaccctcagctcggtgaagttctaattgatggagtgaatctcaaggag
ttgcagctaaggtggatcagaagtaaaattggccttgtgagccaggagccagtcttgttt
gctgctagcattagagataacatagcttatggcagggataatgctacaaatcaggaaatt
agagctgcagctgagcttgctaatgcctccaaattcattgataaaatgccccagggtttt
gctactttggttggtgaacatggaacacaattatctggtgggcagaagcaaagaattgcc
attgccagagcaattctgaaagatccaaggattctactactggatgaagcaaccagcgct
ttggacaccgaatccgaaaggattgtgcaggaggctcttgacagggtcatgtcaaaccgg
accaccgtcatagtcgctcaccgtttgaccactgtcaggaatgctgatactattgctgtc
atccatcaaggatcaatagttgaaaaaggttcacaccatgagctcataagcgatccagat
ggagcgtatagccaattgatacgcttacaggaaaacagtcatgattctgaggatgcaaat
taccagaacaagtcaggcaagaagagtgattctgggattcgctcgggcaaacaatcgttt
tcgtaccagtcgactcctcagagatcatctagggacaacagtaacaatcactcattctca
gtatctgctactcctctagaaattgatgtccagggtggttcaccaaagaagatagctgaa
gaaacaccacaggaagtgcctctcagtcgcctcgcagcgcttaacaaaccagagatccca
gtgcttctgcttggttctgttgcttctgctgtcagtggagttatcttcccaatctttgcg
atacttttatccaatgtgatcaaagcattttatgagcccccacaagtgctaaagaaggat
gctgagttttggtcatcgatgttcttagtgtttggggcagtgtacttcttgtcacttcct
attggctcataccttttttcagtggctgggtgtaggttgatcagaaggatcagactgatg
acttttgagaaggttgtaaatatggagattgaatggtttgatcatccagaaaactcaagt
ggatcaatcggagcaaggctatcggccgatgcagcaaaaattagggggcttgtgggtgat
gcacttcaactggttgtgcagaatttagcaacattagttgctggtttgttgattgctttt
atatcaaactgggagctatctctgatcatcttggcgttgataccactcatcggcgtcaac
ggatggatccagatgaagtttattcagggattcagtgcagatgcaaagatgatgtatgaa
gaggcaagccaagtggcaaatgatgcagtgagcagcataaggacagtagcctcattttca
gctgaagagaaggtaatggatttgtacaagatgaaatgtgaaggaccactaagaacagga
atcaggacggcgataataagcggtatcggtttcggtgtttccatcttcctgctgtttgga
gtctatgcagccagcttctatgccggtgctcggcttgtcgaggacaggaaaacaacattt
cctaacgttttcagggtgtttcttgctctcacaatggcagcaattggggtgtcacacact
agcaacctcacatcagattcttccaaggcaaaatcagctgtatcttctatattcgccatc
gtagaccgtaaatctaggattgatccaagtgatgatgctggagtgagcttagaaccacta
agaggcgatatcgagttccagcatgtgagcttcagatatcctacacgaccagatgttcag
atctttgaagacctgtgcttaacaattcaatctggaaagactgttgctcttgtcggagag
agcggtagcgggaaatcgacagcgatatcattgcttcagaggttctatgatccggatgca
ggccatatacttctagatggagtggacattcaaaagtttcagctaaggtggctaaggcaa
cagatgggtctagtgagtcaagaaccagctctgttcaatgacacgattcgcgcaaacatc
gcgtatgggaaggaaggggatgcgacagaatcagacatcgtatcctccgcgcaattggcg
aatgcgcacaagttcatcagctcattgcatcagggatatgaaaccatggtcggggagcgt
ggagctcagctatccggagggcagaagcaacgcatcgcgatcgcccgcgccattgtcaag
gatcccaagatcctccttctcgatgaagccacgagcgcgctcgacgcagaatcggagcgc
gtcgtccaagacgcgctggaccgggtgatgatgaacaggaccacggtgatcgtggcacac
cggctgtccacaattcagggcgcagacatgatcgcggtggtgaagaacgggatgatcatc
gagaaggggaagcatgatgcattgatcggcatcaaggatggagcttacgcctccctcgtc
gccctccatgtttctgctgctgccatttcgtag
DBGET
integrated database retrieval system
