Oryza glaberrima (African rice): 127776556
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Entry
127776556 CDS
T08853
Name
(RefSeq) ABC transporter B family member 11-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
127776556
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ogl02000
]
127776556
04147 Exosome [BR:
ogl04147
]
127776556
04090 CD molecules [BR:
ogl04090
]
127776556
Enzymes [BR:
ogl01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
127776556
Transporters [BR:
ogl02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
127776556
Exosome [BR:
ogl04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
127776556
CD molecules [BR:
ogl04090
]
Proteins
127776556
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_29
AAA_22
AAA_15
Zeta_toxin
RsgA_GTPase
AAA_16
AAA_21
AAA_23
AAA_30
DUF87
AAA_24
YobI-ATPase
APS_kinase
AAA_7
DLIC
Motif
Other DBs
NCBI-GeneID:
127776556
NCBI-ProteinID:
XP_052158934
LinkDB
All DBs
Position
1:complement(26214599..26221892)
Genome browser
AA seq
1261 aa
AA seq
DB search
MDESGRGTGDDHGRETKDAAAAASSSSGKKVPLFSLFRYADRLDVLLMVVGTVGALGNGI
SQPLMTVLFGNVINSFGANTSGSVLRSVTKVVLNFIYLGIGTSVASFLQVSCWTMAGERQ
SARIRSLYLKAVLRQDITFFDTEMTTGEAVSRMSSDTLLIQGALGEKGGKLVELLSSFIG
GFIIAFTRGWLLTLVMLTSLPLIAIAGAVSAQALTRVSSKRQTSYSDAGDTVEQTIGSIR
TVVSFNGEKKAIAMYRNFIKKSYKATIEEGIITGFGMGSVMCVVFGSYGLAFWYGGKLII
EKGYTGGKIITILFAVLTGASSLGNATPAVAAVVEGQSAAYNLFKTIERKPEIDSDDNNG
MVLEDMNGDIELKDVYFRYPARPEQLILDGLSLQVASGTTMAIVGESGSGKSTVISLVER
FYDPQSGEVLIDGISIKKLRLDWIRGKIGLVSQEPLLFMASIKDNIIYGKKDATLEEIKR
AAELANAAKFIDKLPNGYDTLVGQRGTQLSGGQKQRIAIARAILKDPKILLLDEATSALD
VESERIVQEALNRMMVERTTLVVAHRLSTVRNVDCITVVRKGKIVEQGPHDALVKDPDGA
YSQLIRLQETRRDERHKLPDSRSKSTSLSFRRSRTKDFLSKSNRYSFKSPLGLPVDIHED
GMTSEQQKVDHSDSKAIKKTPFGRLFNLNKPEVPVLLLGSIAASVHGVILPLYGIIMPGV
LKSFYEPPDQLRKDSRFWALMSVVLGVACLISIPAEYFLFGIAGGKLIQRVRTLSFQRIM
HQEVAWFDKPSNSSGALGTRLSVDALNVRRLVGDNLALIVQAVATLITGFAIAFAADWRL
ALIITCVIPLVGAQGYAQVKFLKGFSEESKEMYEDANQVAADAVGSIRTVASFCSEKRVV
AIYNKKCEALRKQGIRSGIVGGIGLSFSNLMLYLTYGLCFYVGAKFVSQGKTTFSDVFKV
FFALVLAAVGVSQSSALSTNATKARDSAISIFSIIDRKSRIDSSSDEGAIMENITGSIDF
NNVSFKYPSRPDVQIFSDFTLHIPSQKTIALVGESGSGKSTIIALLERFYDPDSGNISLD
GVEIRSLKVSWLRDQMGLVGQEPVLFNDTIRANITYGKHSEVTEEEITAVAKAANAHEFV
SSLPQGYDTVVGEKGVQLSGGQKQRVAIARAILKDPKILLLDEATSALDAESERVVQDAL
DRVMVNRTTIVVAHRLSTIKGADMIAVLKEGKIAEKGKHEALLRIKDGAYASLVQLRSNS
E
NT seq
3786 nt
NT seq
+upstream
nt +downstream
nt
atggacgagtcaggcagaggaacaggtgatgatcatggccgggagacgaaggatgctgcg
gcggcggcgtcgtcgtcgtcggggaagaaggtgccgctgttcagcttgttccggtacgcc
gaccgcctcgacgtgctgctgatggttgtcggcacggtgggcgcgctcggcaacggcatc
tcgcagcccctcatgacggtcctcttcggcaacgtcatcaactccttcggcgcgaacacc
agcggcagcgtcctccgcagcgtgaccaaggttgtcctcaacttcatatatctgggaatt
ggaacttcagtagcttcctttcttcaggtatcatgctggactatggcaggagaaaggcag
tctgcccgcatccgttctttatacctgaaagccgttctgaggcaggatattacattcttc
gacacagagatgacaactggtgaagcagtttctagaatgtctagtgataccctcctaatt
caaggtgctcttggtgagaagggagggaagcttgtagaactgttatcaagcttcatcggt
ggctttatcatagcattcactagaggatggcttctcactcttgtcatgctaacatcgcta
ccgttaattgctattgccggtgcagtttctgcacaggccctaactagagtttctagcaag
agacaaacatcatatagtgatgctggggacacagttgaacagaccattggatctataaga
acagttgtgtccttcaatggtgagaagaaagcgatagcaatgtaccgtaattttataaag
aagtcatacaaggctactattgaggaaggcattatcactggttttggcatgggctctgtc
atgtgcgtcgtatttggcagctatggattagccttctggtatggtggaaagctaatcatt
gagaaaggttacacaggaggaaaaatcattactatcttgtttgccgtgttgaccggtgca
tcctcattaggcaatgcaacacctgcagttgctgcagttgtggaaggtcaatctgcagca
tacaatttgttcaaaacaattgagaggaaaccagagatagattccgatgataacaatggc
atggttttagaagatatgaatggcgatattgagctaaaggatgtgtactttcgttaccct
gcaagaccagagcagttgatattggatggattgtcattacaagtagcgagtggaacaaca
atggctatagtcggagagagtggaagcggaaagtcaactgttatcagcctagtcgaaaga
ttctacgatccacagtctggcgaagttttaatagatggaattagcatcaagaaactgaga
cttgattggataagagggaagatcggtcttgttagccaagagcctctgctttttatggcc
tccattaaagataacataatatatggtaaaaaagatgcaacgcttgaagagatcaagaga
gcagcggagcttgcaaatgcagctaagttcattgacaagttaccaaatggttatgatact
ttagttggccagcgcggtactcagctctctggaggacaaaaacagagaattgcaattgca
agagccatcctcaaagatccaaaaatccttttgctcgatgaagcaacaagtgcacttgat
gtggagtctgagaggatagttcaggaggcactaaatagaatgatggtagaaagaaccaca
ctcgttgtcgctcatcgtttgagcactgtgaggaatgttgattgcatcacagtcgtccgc
aaaggaaaaatagttgaacaaggtcctcatgatgcactggtgaaggatcccgatggagct
tactcccagctaattaggctacaagagactcgtcgtgatgaaaggcataaactaccagat
tccagatcaaaaagtactagtttgtcattcagacgatcaagaactaaagattttctcagc
aagagcaacaggtattccttcaagagccccttaggattgcctgttgatatacatgaggat
ggaatgacaagcgaacaacaaaaggttgaccactctgacagtaaggccattaaaaaaaca
ccatttggacggctttttaatcttaataagccagaagtgccagttcttttgttaggttct
atagcagcatcagtgcatggagtcattttgccactatacggtataataatgccaggtgtt
ctaaaatcattctatgaaccgccagatcagctgcgaaaagattctagattttgggcattg
atgtctgttgttctgggggttgcttgtttgatttcaatcccagcagaatattttttgttt
ggaattgctgggggaaagcttatacagcgtgtccgtacactgtcatttcaaagaattatg
caccaagaggttgcttggtttgataagccctccaattccagtggggcacttggtacaagg
ctctcagtcgatgcgttgaatgtccgccgtttagtaggagataacctggcccttatagtc
caggctgtagctacactaatcactggctttgccatagcttttgcggcagattggaggctt
gcactgatcatcacttgtgtaattcctttagtgggtgcacagggctatgctcaagttaag
ttcttgaaggggttcagtgaagaatctaaggagatgtatgaggatgcaaaccaagttgcg
gctgacgctgtaggcagcatcagaactgtagcatctttctgttcagagaaaagagtggtg
gcaatatacaacaagaaatgtgaagctttaagaaaacagggaattcgaagcggaatcgtt
ggagggattggcttaagtttctcaaacttgatgttatatctgacttacggtctttgcttc
tatgttggtgcaaagttcgtaagtcagggaaaaactactttttcagatgttttcaaagtt
ttctttgctttagttttggcagccgttggtgtttcgcagtcaagtgcattgtctactaat
gcaacaaaggcaagggattctgccatttccatttttagtattatcgatcggaagtctagg
attgattcaagtagcgacgagggagcgataatggaaaacatcactggcagcattgatttc
aataatgtcagtttcaagtacccatcacgccctgatgttcaaatattcagtgactttacc
ttgcacattccttcccaaaagaccatagcacttgttggagagagcggtagtgggaagtcc
acgataattgctttattagagcgtttctatgatcctgattctggtaatatctcactagat
ggagttgaaattagaagcttaaaagtcagctggttgagggatcagatggggcttgtaggc
caggagccagtgcttttcaacgacacaatccgtgccaacataacatacgggaaacacagt
gaggtaacagaggaagagatcactgctgtggccaaggcagcaaacgcccatgagttcgta
tcaagcctgccacaaggatacgacacagtggtaggtgagaaaggggtgcaactatctggt
gggcaaaaacagagggtagcaattgcaagggccatcctaaaggaccctaagatactgcta
cttgatgaggcaaccagtgctctagatgcagaatcagaacgtgttgttcaagatgcattg
gatcgagtcatggtcaacaggactaccattgtagtggcacaccgcctctccacgatcaaa
ggggctgatatgattgcagtcctcaaggaaggaaaaattgcagaaaaaggaaagcatgaa
gcactattgcggatcaaggatggtgcatatgcttcacttgtacaactccgctctaattcc
gagtaa
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integrated database retrieval system
