KEGG   Oryza glaberrima (African rice): 127778541
Entry
127778541         CDS       T08853                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 6A-like
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
ogl  Oryza glaberrima (African rice)
Pathway
ogl03020  RNA polymerase
ogl03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ogl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    127778541
  09124 Replication and repair
   03420 Nucleotide excision repair
    127778541
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ogl03021]
    127778541
   03400 DNA repair and recombination proteins [BR:ogl03400]
    127778541
Transcription machinery [BR:ogl03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     127778541
  RNA polymerase III system
   RNA polymerase III
     127778541
  RNA polymerase I system
   RNA polymerase I
     127778541
DNA repair and recombination proteins [BR:ogl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      127778541
SSDB
Motif
Pfam: RNA_pol_Rpb6 Merozoite_SPAM
Other DBs
NCBI-GeneID: 127778541
NCBI-ProteinID: XP_052161121
LinkDB
Position
7:complement(14552834..14556208)
AA seq 142 aa
MAEDDYNDMDMGYEDEPPEPEIEEGAEEEPENNNEDAVDDVVGAEDDKEQEKTARPRKTS
KYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIRRYLPDGS
YEDWGVDELIVEDSWKRQVGGG
NT seq 429 nt   +upstreamnt  +downstreamnt
atggcggaggacgactacaacgacatggacatggggtacgaggatgagcccccagaacct
gagattgaggaaggagctgaggaagagcctgagaataacaatgaggatgctgtggatgat
gtggttggggctgaagatgacaaggagcaggaaaagacggctcgtccacggaaaacatca
aagtatatgacaaaatacgagcgtgcacgcattcttggtacacgtgccttgcagataagc
atgaatgctcctgttatggtcgagcttgaaggggagactgatccacttgagattgccatg
aaagaattgagagcacgcaagatccctttcacaatcaggcggtatttacctgatggaagc
tatgaggactggggagttgatgagctcattgtagaggactcctggaaacggcaagttggt
gggggctaa

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