Oncorhynchus gorbuscha (pink salmon): 123991339
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Entry
123991339 CDS
T07892
Name
(RefSeq) vascular cell adhesion protein 1-like
KO
K06527
vascular cell adhesion molecule 1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
123991339
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ogo04090
]
123991339
04091 Lectins [BR:
ogo04091
]
123991339
CD molecules [BR:
ogo04090
]
Proteins
123991339
Lectins [BR:
ogo04091
]
I-type lectins (Siglecs)
123991339
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
I-set
ig
V-set
C2-set_2
Ig_5
Ig_6
C1-set
C2-set
ICAM1_3_5_D2
Izumo-Ig
ICAM_N
Motif
Other DBs
NCBI-GeneID:
123991339
NCBI-ProteinID:
XP_046148796
LinkDB
All DBs
Position
LG02:complement(15992601..15999133)
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AA seq
423 aa
AA seq
DB search
MKKMQLLQLCAFFHVIVCSQIEEIAISPPGNEVFVLAGSAFQFTCACVGSCKTPQFSWTR
ATTDSDRMRTKNSTLKFSNVKIEDAGRYTCDAKCDGSSEKKLKSVKMTVYAFSQPVLVMP
SILTENVACDVTCSVDAFDHVDSVHISWYLGGELLKDETQQTLDAANVSDTLTLTALRDY
TGKSLTCEVKADMRNNSKQVSYCLDIHYAPKINISASPSGMEEEEVVMSCRSDGNPTPTI
EWERKWELWPKNLHRHAQGNVTGRLHRSNQGVYQCVAKNMVSEAKQEMKLEVQYGPANTS
IQSFPLQAISYGVQLNLTCLSDMYPKAKQYIWTRIPDMALPKEAMVTNSHLIIDNFQEHH
QGIYECRVIHHSGKTERAFYTASVQAEPESKVFTQMVGAVAGSLVSGITGGLVAGFMLAK
WLK
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaatgcaacttcttcaactgtgtgccttcttccatgtcatagtctgtagtcag
atagaagaaatcgccatttcacctcctgggaatgaggtatttgtgctagcaggttcagcc
ttccagttcacctgtgcttgcgttggtagttgtaagacaccacagttcagctggacaaga
gctactactgactctgatcgtatgcgaaccaaaaacagcactctcaaattttccaacgtg
aagattgaggatgcgggtcgatatacctgtgatgcaaagtgcgatggcagttcagagaaa
aaactcaaatctgtcaagatgactgtctatgcttttagtcaacctgtgttggtgatgcca
agtattttgacggaaaatgtggcttgtgatgtaacatgcagtgttgatgcatttgaccac
gttgacagtgtccacataagctggtatctaggaggtgagcttcttaaagatgaaactcag
cagactttggatgcagctaacgtgtcggacacactgactctcactgccctgagggactat
actgggaagagtctgacctgtgaagtgaaagcagacatgagaaataactcaaaacaggtt
tcttactgtctcgacatacactatgcacctaagatcaacatcagtgcttccccatctggg
atggaagaggaggaagtggtgatgagctgtagaagtgacggcaaccccacccctactatt
gagtgggagagaaaatgggagctgtggcccaagaatctgcatcgacatgcacaaggaaat
gtcacgggccggctacaccgcagcaaccaaggggtttaccagtgtgtggccaagaacatg
gtgtccgaggcaaagcaagagatgaaactggaggtgcaatacggaccagcaaacacaagt
atccagtccttcccactgcaggccatttcctatggggttcagctgaaccttacctgcttg
tcagacatgtaccccaaagccaaacagtacatctggaccagaatcccagatatggcccta
cccaaggaggccatggttacaaacagccatttaatcatagataacttccaagagcaccac
caaggcatctatgagtgtagagtgattcaccacagtgggaaaacagagagagcattctat
accgcctctgttcaagcggagcccgagtctaaggtgttcactcagatggtgggtgcagtg
gctggcagtcttgtcagcggaatcacaggaggcctcgtggcaggattcatgttagctaaa
tggctgaagtga
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