Oncorhynchus gorbuscha (pink salmon): 123995230
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Entry
123995230 CDS
T07892
Symbol
esr1
Name
(RefSeq) estrogen receptor isoform X1
KO
K08550
estrogen receptor alpha
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
123995230 (esr1)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ogo03310
]
123995230 (esr1)
Transcription factors [BR:
ogo03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
123995230 (esr1)
Nuclear receptors [BR:
ogo03310
]
3. Estrogen like
3A. Estrogen receptor
123995230 (esr1)
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Motif
Pfam:
Hormone_recep
zf-C4
Oest_recep
Motif
Other DBs
NCBI-GeneID:
123995230
NCBI-ProteinID:
XP_046154627
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Position
LG14:complement(58910473..58934046)
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AA seq
622 aa
AA seq
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MLVRESHTQISKPLGAPLRSRTTLESHVISPPKLSPQQPTTPNSNMYPEETRGGGGAAAF
NYLDGGYDYTAPAQGPAPLYYSTTPQDAHGPPSDGSMQSLGSSPTGPLVFVSSSPQLSPQ
LSPFLHPPSHHGLPSQSYYLETSSTPLYRSSVVTNQLSASEEKLCIASDRQQSYSAAGSG
VRMFEMANETRYCAVCSDFASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTMDRN
RRKSCQACRLRKCYEVGMVKGGLRKDRGGRVLRKDKRYCGPAGDREKPYGDLEHRTAPPQ
DGGRNSSSSLNGGGGWRGPRITMPPEQVLFLLQGAEPPALCSRQKVARPYTEVTMMTLLT
SMADKELVHMIAWAKKVPGFQELSLHDQVQLLESSWLEVLMIGLIWRSIHCPGKLIFAQD
LILDRSEGDCVEGMAEIFDMLLATVSRFRMLKLKPEEFVCLKAIILLNSGAFSFCSNSVE
SLHNSSAVESMLNNITDALIHHISHSGASVQQQPRRQAQLLLLLSHIRHMSNKGMEHLYS
IKCKNKVPLYDLLLEMLDGHRLRSPGKVAQAGEQTEGPSTTTTTSTGSSIGPMQGSQDTH
IRSPGSGVLQYGSPSSDQMPIP
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgctggtcagagagtcccatacgcagatttccaaacctctcggagctcctctcagatcc
cgaacgaccctggagagccacgtcatctcccccccaaaactctcaccacagcagccgacc
acccccaacagcaacatgtaccctgaggagacacgcggaggtggtggggcggccgccttt
aactacctggacggagggtatgactacacagcccctgctcaaggcccggcccctctctat
tactccaccaccccccaggatgcccacggacccccttcggatggcagcatgcagtccctg
ggcagcagtcccaccggcccactggtgtttgtgtcctccagcccccagctcagcccccag
ctcagccccttcctccaccccccaagccaccatggtctccccagccagtcatactacctg
gagacctcgtccacacccttatacaggtcgagtgtggtaaccaatcagctgtcagcgtca
gaggagaagctctgcatcgcctccgataggcagcagtcgtacagtgcagcagggtcaggg
gtcaggatgtttgagatggccaacgagacgaggtactgtgcggtctgcagcgactttgcc
tctgggtaccactacggagtttggtcctgcgagggctgcaaagccttcttcaaaaggagc
atccaaggtcacaatgactacatgtgccctgcgactaaccagtgtacaatggacaggaat
cgtaggaagagctgccaggcatgccgcctcagaaagtgttatgaagtggggatggtgaaa
ggaggcttgcgtaaggaccgcggtgggcgggttctcaggaaggataagcggtattgtggc
cctgctggggacagagagaaaccctacggtgacctggagcacaggacagcgccccctcag
gacgggggtaggaacagcagcagcagtctcaatggtggtggaggatggcgtgggcccaga
atcaccatgcctcctgaacaggtgctattcctgctgcagggggcagagcctccggccctg
tgttctcgtcagaaggtggcccgcccctacacagaggtcaccatgatgaccctgctcacc
agcatggctgacaaggagctggtgcacatgatcgcttgggctaagaaagtaccaggtttc
caggagctgtctctccatgaccaggtgcagctgctggagagttcctggctggaggtgctg
atgatcggactcatatggcggtccatccactgccctgggaaactcatcttcgcccaggac
ctcatactggacaggagtgaaggggactgtgtggagggtatggctgagatcttcgacatg
ctcctggccactgtgtctcgcttccgcatgcttaaactaaagcctgaggagtttgtgtgc
ctcaaagccatcatcttgctcaactctggtgccttctccttctgttctaactctgtggag
tccctccacaacagctcggcagtggaaagcatgctgaacaacatcaccgacgccctcatc
caccacatcagccattcaggagcctctgtgcagcagcagcccagacggcaggcccagctc
ctgctcctgctctcacacatcagacatatgagcaacaaaggcatggagcacctttacagc
ataaaatgtaagaacaaagttcctctgtacgacctgctcctggagatgctggacggtcac
cggctccgatccccaggcaaagtggcccaagctggggaacagactgagggcccctctacc
accactaccacctccacaggctccagcatagggccgatgcaaggcagccaggatacccac
atcagaagccctggttccggggtactccagtatggctcccccagctcagaccagatgccc
attccgtga
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