Oncorhynchus gorbuscha (pink salmon): 123996805
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Entry
123996805 CDS
T07892
Name
(RefSeq) nucleoprotein TPR-like isoform X1
KO
K09291
nucleoprotein TPR
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123996805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogo03019
]
123996805
Messenger RNA biogenesis [BR:
ogo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
123996805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
123996805
NCBI-ProteinID:
XP_046156469
LinkDB
All DBs
Position
LG15:25757285..25793901
Genome browser
AA seq
2375 aa
AA seq
DB search
MATVLLQALERAEIAKLPKAVQNKLEKLFSDLQYEIDSLKSHQEQFRVDSEQQFFEKVQR
LEQSQEQFVTQTEQHHKLREEFTKIDEELKSVLEKNKEYEINQEKLTSEQAQLCKAKNEL
EAEKRELVRTLERRSQEVAYLSEDLQRLNDKVAEVNASKMGLQLKLDELESSEVNIKYRE
KRMEQEKELLRGQTAWLNAELKAKSEELLALSRQKGNQILELKCSLENKEDELNRVQDQV
TSLKTSNEGLQKQAEDIINKLKEDKEQQASMEEKFRNELNANIKLSNLYKGAAADSESKS
EELSGAVEELHKLLKDAGEANKALEVRLQEMDDCRDNEAAALKERIINLEKELENANELL
SDTKLRGSAGAASVLSEETITTMSPTAVAVAKIVKPGMKLTELYTAYVETQEALQLERVE
NKRVNKYLDDIVQEVEAKGPILKRQRDEHERMQKSVASLSSKLEQAVKEVHRLQKVTDEA
NKRSSVLERDNQRSDVQLADMGQQIRVLLIELEEARGNHVAHDEEVSSADISSTSEVITQ
HLVTFRGVEELQQQNQRLLVALRELSEAQEREEEETTGTKCSELERSLEKAQAELEALRE
QRSHQMQLAESIVRQRDMYRVLLAQATGVSFPQQGAAAAEEFSSTPRRSPAATPTTPTGI
ITMATESTEVVEAKAALRQLQEVFSSYKRERSESDKALMEQSEKLQKQVSDQRFQNAKIS
TQLEFTSKRYEMLQDNVKGYRKEIASLMEKGQKMAAAAQKCEQTVHTMTQDLRVVQEKLN
MAEGRAESLRKEREMLKLVESRLTQEKETMQTQQRGQNMLLTNLKTIEATLERSETDTRQ
RLNTQIEKQEREIGQLQKRLEHEVEQRHLLSRNQDLQLMDTKRQLEAQTALLQKTRDQLS
AAQLEVSSLRLQQGSGEGGRLSLSSPPTPMGIRGFQVSEGDSEDLHGRLKQAETRAEELT
EQLRTATSSMELYRAMAQSLEESLDKEMQVTEQARSAIEERVKEAQEQHRQLEKKLLEAE
KEKQGLQEEKMKALASVEQQVAVLRRSLSSVQADHQEALQMAAVAAAQEQQAMLDSQEQA
KLASEAQDKYEREMMLHAADVESLQAAKAQALQAAMLRQQLEERAQRASAQLLEARVSWE
EQERILKEEMSKVVFRSEELQRQNSLLHEQIQTMSCKMAATLQRQANESPLNISLTEEGK
SQDQVLEILRFVRREKEIAESRFEVAQGESLRHRLRVEHLERELRELQESLSAERERMQV
TAKTLAKHDELMKKTETMSVLMETNKMLREEKERMEQELQQTQAKVRKLESDIMPMQESN
AELSEKSGMLQAEKRILEEDIKRWKARTQHLVSQQKDTDPEEYKRLHSEKEAHLKRIQQL
TEETGRLKAEVARSGGSVTSLQSQVQMLREGLGKVSSDRDARRRSMEAMNLDIQEKFRTI
TQVKKIGRRYKTQYEELKVEHDKMVFEAASTPAQEQEAQQASAQELQGLKDSLGQAETRT
KDLEGQLDNLNKVVGEREAEVRGSQEQASRLQTELTRLRQELQEKASQEDTLRQQMAEKE
EKTRKAFVGAKQRINQLMGSKDQLQKENEELKQQREELEVRVSALKSQYEGRLSRQEREL
RDLREQQERHGEQRDEPLEQGPSKAQEQQRTTEQRGPLKTTQATDRGSTSTSEPPTANIK
PTPLGAQGPSKPPAIPGNKPTPRASIRPMITPATVPTPTPTATVMPTTQVENQEAMQSSE
GPPEHVTVYGSASGSVRSTSPNVQTTNPMLVVQQTQTQTTAFVQPTQQQSLPHTEPANQE
QPPAPVMEAAPSSQMERPSTSTAVFGTVSATPGTSSMSKRPREEEQDSSMVADTDTPQED
PSEPPIPKKLRIIQRVDPEEPEAQEEVLAEGSAEGLVPGEGQEAPETSQQVEEEYPVLEE
AEEGAASQSVPVEMLLSETAFISFSYDANEEPPQHDVIVIVTDSESEDEQQEEVEEDEEE
EPDYDEEEEEDDDEEEEEEDEDDGGMGDEGEESNEGSRDGNEAYEGDDTEGPDGTDPGTE
TEESLGASDSTQRPADSQTHSFEGSSSMEAFSSDPTSSAPRMHQSPRRAPHPLPPRLNIT
QERGPPAQVQRPMRRQSVGRVPQLTPGMASGGVSHNIGQHFFADDDRMVPSTPTLVPPHR
SDSFAEAIHSPQVAGVPRFRFGTPEDLMPQTTTSHSDLGHLASQGGLGMYDSPLFLPGNE
DESGGLSVPTTPLQVAAPVSIFAEVPPSDGTEHTSQSVSMVTTSTPVLVVAEGPSPGDER
DDVFMAPGGDLVEVSLEPVMSRAGEIEEPTQVSDDCGLPSTSQELSSSSADTSRTQPKPS
RPGHSRQLQRWTENRMRRGTLPSRGVTGTGRRFAR
NT seq
7128 nt
NT seq
+upstream
nt +downstream
nt
atggctacagtgctacttcaagcgttggagcgcgctgagatagcgaagctaccaaaagct
gttcaaaataaactagaaaagttattttctgatctgcaatatgaaatagattccctcaag
tcacaccaggagcaatttagagtcgatagcgaacaacagttctttgagaaagtgcaacgt
cttgaacagagtcaggaacagtttgtgacccagactgaacagcaccacaaactccgagag
gagttcaccaagatcgatgaagaactcaagagtgtactagaaaagaataaagagtatgaa
atcaaccaagagaagttgacatctgaacaggcccagctctgtaaagccaaaaatgaactg
gaggcagagaagcgggagcttgtgcgtacattggagaggagatcccaggaagtggcctat
ctgagtgaggacctgcagcgcctcaatgacaaagtggcggaagtcaatgcctcaaagatg
gggctgcagctcaagttggatgagcttgaatcctcagaggtcaacatcaagtaccgtgag
aagcgtatggagcaggaaaaggagctgttgcgaggccagactgcctggctgaacgcagag
ctcaaggctaaaagtgaggagctgctggctctttcacgccagaagggcaaccagatcctg
gagctgaagtgcagcttggagaacaaagaggatgagttgaacagagtccaggaccaagtg
accagtttgaagacttcaaatgaaggccttcagaagcaggctgaagacataatcaacaaa
ctgaaagaggataaggagcagcaggctagcatggaggagaagtttagaaacgagctgaat
gccaacatcaagctctccaacttgtacaagggagctgctgcagactctgagtccaagagt
gaggaattgagtggggctgtagaggagctgcacaagctgctgaaagatgctggagaggcg
aacaaggccctagaggtgaggttgcaggagatggatgactgtcgggacaatgaggctgct
gcgctgaaggagaggatcatcaatttggaaaaagaactggagaacgccaacgaactgctg
tccgacaccaagctcagaggctctgctggtgcagcctcagtgctgtcagaggaaacgatt
accaccatgtccccgaccgcagtcgccgttgccaagatcgtcaaacctggcatgaagctg
actgagttgtacacagcgtatgtggagacccaggaggcactgcaactggagcgtgtggag
aacaagcgggtgaataagtacttggatgacatagtgcaggaggtggaggctaagggtccc
atcctcaaacgccagagggatgagcatgagcgtatgcagaaatctgtggccagcctttca
tccaagctggaacaggcagttaaggaggttcaccgtctgcagaaggtgactgacgaggcc
aacaagcgctcttctgtcctggagagagacaaccagaggtctgatgtgcagcttgcagac
atggggcagcagatccgtgtcctactcattgagttggaggaggcgcgtggtaaccatgta
gcccatgacgaggaggtgagctctgctgacatcagcagcacgtcagaggtcatcacgcag
cacctggtgacgtttcgtggggtggaggagctccagcagcagaaccagcgcctcctggtg
gccctccgagagctcagcgaggcacaggagagggaggaggaagagaccactggcaccaag
tgcagtgagctggagcgcagtctggagaaggcccaggcagagctggaggctctgcgagag
cagcggagccaccagatgcagctggctgagtccatcgttaggcagagagatatgtacaga
gtgctgctggcccaggccaccggagtcagcttccctcagcaaggtgcagcagctgctgag
gagttctctagcaccccccgccgctcccctgccgccacccccaccacacccactggaatc
attactatggcaaccgagtcaaccgaggtggtagaggccaaggcagccctccgacagttg
caggaagtgttctcttcctataagagggagaggtctgagagtgacaaggccctgatggag
cagagtgagaagctacagaagcaggtgtctgaccagagattccagaatgccaagatatcc
acccagctggagtttacttccaagaggtatgagatgcttcaggataatgttaagggctac
aggaaggagattgcctctctgatggagaagggacagaagatggctgctgcagcccagaag
tgtgagcagactgttcacaccatgacccaggacctgagggttgtccaggagaaactaaac
atggcagagggtcgtgctgagagcctcaggaaggagagagagatgctgaagctagtggag
tccagactgacccaggagaaggagaccatgcagacccaacaacgaggacagaacatgctg
ctcaccaatctcaagaccatagaggccacgttggagcgctccgagacagacaccaggcag
cgtctgaacacccagatagagaagcaggagagggagatcggccagctgcagaagagactg
gagcacgaggtggagcaacgccacctgctgagcagaaaccaagatttgcagctgatggat
accaagaggcagctggaggcccagacggccctgctccagaagaccagggatcagctgagt
gctgcccagctggaggtgagctctctcaggctgcagcagggcagtggagagggtggtcgt
ctgtccctgagctccccgcccactcccatgggcatcagaggtttccaggtttcagaaggg
gactctgaggatctgcatggccgcctgaagcaggcagaaacacgggcagaggagctgaca
gagcagctgaggacagccacctccagcatggagctgtacagagccatggcccagagccta
gaggagtccctggacaaggagatgcaggtgacagagcaggctcggtctgccattgaggag
cgtgtgaaggaagcccaggagcagcaccgtcagttggagaaaaagctcctggaggcagag
aaggagaagcagggcctgcaggaggagaagatgaaagccctggcctccgtggagcagcag
gtggctgtgctgaggaggagtctgagcagtgtgcaggcggaccaccaggaggctctacag
atggcggcggtggcagcagcccaggaacagcaggccatgctggacagccaggagcaggcc
aagctggcgtcagaggcacaagataagtatgagcgtgagatgatgctccacgctgcagac
gtggagtccctccaggcagccaaggcccaggccctgcaggcagccatgctcagacagcag
ctggaggagagggcccagagagcctctgctcagctactggaggccagagtctcctgggag
gaacaggagaggatcctcaaggaggagatgtctaaggtggtgtttcgttctgaagagctg
cagaggcagaacagcctcctccatgaacagattcagaccatgagctgcaagatggccgcc
accctgcagcgccaggccaatgagagccctctgaacatctccctcacggaggaaggcaag
tctcaggaccaggtccttgagatactcaggtttgtgcgccgagagaaggagatagcggag
tctcgattcgaggtggcccaaggagagagtcttcgccataggctgagagtagagcacctg
gagagagagctgagagaactacaggagagccttagtgctgagagagagcgaatgcaggtg
acagctaagaccctggctaagcatgatgagctgatgaagaagactgagaccatgagtgtc
ctgatggagaccaacaagatgctgagggaggagaaggagaggatggagcaggagctccag
cagacacaggctaaagtgcgtaagctggagtcggacataatgcccatgcaggagtccaac
gctgaactgagtgagaagagcggcatgctgcaagcagagaagaggattctggaagaggac
atcaaacgctggaaggccagaacacagcacctggtgagccagcagaaggacacagaccca
gaggagtacaagcgtctccactctgagaaggaggctcacctcaaacgcatccagcagctc
actgaggagacgggcagactcaaggctgaggtggccaggagtggcggctcggtgacgtcc
ctccagagccaggtgcagatgctgcgtgagggtctggggaaggtaagctctgacagggat
gctcggaggaggagtatggaggccatgaacctggacatccaggagaagttccgcaccatc
actcaggtcaagaagatcggacgccgctacaagacacagtatgaggagctcaaggtggag
cacgacaagatggtgtttgaggcagcgtccaccccagcccaggagcaggaggcccagcag
gcctcagcccaggagctccagggtctgaaggactccctgggacaggctgagacccggacc
aaagacctggagggacagctggacaacctcaacaaggtggtgggtgagcgtgaggcggag
gtgcgcgggtcacaggagcaggcctccaggctgcagacagagctgaccaggctgagacag
gagctgcaggagaaggcctcccaggaggacaccctcagacagcagatggctgagaaggag
gagaagaccaggaaggcctttgtcggggccaagcagaggatcaaccagcttatgggctcc
aaggaccagctgcagaaggaaaatgaggagctgaaacagcagagggaggagctggaggtc
agagtcagtgctctgaagtcccaatacgagggccgtctgagccgccaggagagggagctg
cgggacctgagggaacagcaggagagacacggagagcagagggatgagcctcttgaacag
ggtcccagcaaggctcaggaacagcagaggaccacagagcagcgaggaccactgaagacc
acccaagctacagaccggggcagcaccagtacctctgagccccctactgccaacatcaag
cctacccctctgggtgctcaaggccccagcaagccccctgccatccctgggaacaagccc
accccccgggcaagcatcaggcccatgatcacccctgccactgtgcccacccccacccct
actgccaccgtcatgccaaccacacaggtggagaaccaggaagccatgcagtcatccgag
ggcccgcctgagcatgtgactgtttacggcagtgccagcggttcagtacggtcaaccagc
cccaacgttcagaccaccaacccaatgctggtggtccagcagacccagacccagaccaca
gccttcgtccagccaacacagcaacagagcctgccccacactgaaccagccaatcaggag
cagcccccggccccagtaatggaagcggcacccagttcgcaaatggagaggccgtcgacg
tcaacagccgtgtttgggacagtttcagccaccccaggaacatcttccatgtccaagaga
cctcgtgaggaggagcaggacagctctatggtggctgacacagacacgccccaggaggac
ccctctgaaccccccatccccaagaagctacgcatcatccagagagtcgacccagaggag
ccagaggcccaagaggaggtgctggctgagggcagtgcagagggactggtgcctggcgag
ggccaggaagccccagagaccagccagcaggtggaggaggagtacccagtactagaggag
gctgaagagggtgcagcgtctcagtctgtccccgtagagatgctcctgtccgagaccgca
ttcatctcattttcatacgacgccaacgaagaacccccccagcacgatgtcatcgtcata
gtgaccgactctgaaagcgaggacgagcagcaggaggaggtggaggaggatgaggaagag
gaaccggactatgatgaggaggaggaggaggatgacgacgaggaggaggaggaggaggat
gaagatgatggagggatgggggatgagggggaagagagcaatgaagggagcagagatggc
aatgaggcatatgaaggcgacgacacagagggtcctgatgggacagacccaggcacggag
acggaggagagtctaggagcatctgactccacccagcgcccggctgactcccagacacac
agcttcgagggcagcagcagtatggaagccttctcaagtgacccaaccagctctgctccc
agaatgcaccagtctccacggagagcaccccatcctctgcccccccgcctcaacatcacc
caggaacggggaccccctgctcaggtacagcgccccatgcgtcgccagtcggtaggcaga
gtccctcagctcacccctgggatggccagcggtggagtaagtcacaatattggacagcac
ttttttgccgatgatgacaggatggttcccagtactcctactctggtgccgccacaccgc
tctgacagctttgcagaagctatccattctccccaggtggctggtgtaccccggttcagg
ttcggcaccccagaggacctgatgccccagaccaccacctcccactctgacctgggacat
ctggcatcacaaggaggtcttgggatgtatgatagtcctttgttcctgcctggtaatgag
gatgagtctgggggcctcagtgttcccaccacacccctgcaggtggctgccccagtgtcc
atatttgcagaggtcccgccatctgacggcacggaacacacctctcagtctgtttccatg
gtaaccacctcaaccccagtcttggtggtggccgaaggacctagtcctggggacgagagg
gatgatgtcttcatggcgccggggggagaccttgtggaggtgtctctggaacctgtaatg
tctcgggcgggggagatagaggaacctacccaggtctcagatgactgcggcctgccttct
accagccaggaactctcctccagctctgcagacactagtaggactcagcccaaaccctct
agaccaggacacagccgacagctccaacgctggacagagaaccgcatgaggagagggacg
ttgccatcacggggtgtaactgggactgggaggagatttgcccgataa
DBGET
integrated database retrieval system
