Oncorhynchus gorbuscha (pink salmon): 123999580
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Entry
123999580 CDS
T07892
Symbol
hlcs
Name
(RefSeq) biotin--protein ligase
KO
K01942
biotin---protein ligase [EC:
6.3.4.9
6.3.4.10
6.3.4.11
6.3.4.15
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo00780
Biotin metabolism
ogo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
123999580 (hlcs)
Enzymes [BR:
ogo01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.9 biotin---[methylmalonyl-CoA-carboxytransferase] ligase
123999580 (hlcs)
6.3.4.10 biotin---[propionyl-CoA-carboxylase (ATP-hydrolysing)] ligase
123999580 (hlcs)
6.3.4.11 biotin---[methylcrotonoyl-CoA-carboxylase] ligase
123999580 (hlcs)
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
123999580 (hlcs)
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Gene cluster
GFIT
Motif
Pfam:
BPL_LplA_LipB
BPL_N
BPL_C
DUF4350
Motif
Other DBs
NCBI-GeneID:
123999580
NCBI-ProteinID:
XP_046161446
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Position
LG16:complement(57810348..57852833)
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AA seq
858 aa
AA seq
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MTGVKACEDLSKWTLLWGSSLSCGPRIENISFIIEATSGQRVGSQAHHTTENKKVLKWSD
YCLPLACSPLHPFRAVAQASVDNFSRLGVAFMEDRLQLDNGLVPSKIVSVLLRESAFKEL
LEKGKLEKHITSLSLKKQTEIILSEPSPCECELLSVRGDLQLTQNRKCSLLQPPEIQRAL
VERRGSEHLRGASPGVDSGDNSLGINHQHMEGHGRHLHLSSCHECLELENSTILSVKYAS
VDNIPDLPDDYATCTDSGDETLDEFEEDEAESFVGQSRRVNVTGKPPNVLVFTGGCQEKF
QRVRSLLGECIDMDSYTVYPLRPQQALSEPWLESATLLVLASDEPLTPQLQARFLAYLEQ
GGRVLGLSSTLCPTGLALVPRKSRRSQICRLSFTKADTTELDLSVLASGSVFVRELQSGG
VPGETEVWGELKWDGDGGDKDMVIVRVTRGEDRGEAVLCQVHLETAPNSEDIVSSQGFDE
LKMSNARRYEVLTEIITSLGLSCEQSQAPPASPVYLLATSEERRASFLKWLHTQLDKEGL
LKCSKAFLKVVPSSELQAGPPLLPKGTLALVTDAPEAQSWEQFSLQTYSQHLETRTLGRT
LLYTQVTPTTMDLLDGLMLQLPEKMGLTAVAARQTQGRGRGGNAWLSPLGCAMFSVHVQV
AVSSRLGQRIPFLQHLAALAVVEAVRTLPGYQDIDLRVKWPNDIYYGNLMKLGGVLVTST
VMGPTFHLLIGCGFNVSNSNPTIAINDLVMQHNREHGTSLEALSSAQLIGRTLTCLEQLI
SDFQERGSEAVLPLYYKRWMHNGTQVRLWSEDGPQAVVVGLDDNGFLQVRSEEQGVVSVQ
PDGNSFDMLRNLVVTKQR
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgacaggcgtgaaggcatgtgaggacctcagcaagtggactcttttgtgggggtcctct
ctgagttgtggcccacggatagagaacatttctttcatcatagaggctacatcaggacaa
agagtgggcagccaggctcatcacactacagaaaataaaaaagtgctgaagtggtcagac
tactgtctccctctggcctgtagcccattgcatccgttcagggccgtggctcaggccagc
gttgacaacttcagccgccttggggtggcgtttatggaagatcgccttcagctggacaat
ggactagtgccttcaaagatagtctctgtcctgctccgagaatctgcgttcaaagaactt
ctggagaaaggaaagttggaaaagcacatcacttccctctccctcaaaaaacagactgag
atcatactctctgagccttctccctgtgagtgtgagctactctcagtgagaggcgacctc
cagctaacacaaaataggaagtgcagccttctccaaccgccagagatccagagagcttta
gtggaaagacgaggctccgagcacctacgaggagccagccctggggtggacagcggggac
aactcacttggcatcaaccaccagcacatggagggccacggccgccacctccacctctcc
agctgccacgagtgcctggagctggagaacagcaccatcctctccgtcaagtacgcctcg
gtcgacaacatccctgaccttcccgacgactacgccacgtgcacggacagcggggacgag
actctggacgagtttgaggaggatgaggcagagagctttgttggtcaaagccggcgggtc
aatgttaccgggaagccccccaacgtgctggtgttcacgggtggctgccaggagaagttc
cagagggtgcgttcgctgctgggcgagtgcatcgacatggacagctacacggtgtaccct
ctgaggccccagcaagccctcagtgaaccctggctggagagtgccaccctgctagtgctg
gcctcagacgaaccccttaccccccagctccaggcccgtttccttgcatacctggagcag
ggtggcagggtcctggggctctcctcaaccctctgccccacggggctggccctggtgccc
aggaagagcaggaggagccagatctgcaggctaagcttcaccaaggctgataccacagag
ctggatctaagcgtgcttgccagcgggagtgtgtttgtcagggagctgcagagtggtggg
gtccctggagagacggaagtctggggggagctgaagtgggacggagatggtggagacaag
gacatggtcatcgtcagggtgacgcgtggagaggaccgaggggaggctgtgctgtgtcag
gtgcacctggagacggcccccaactctgaagatattgtgtcgtctcagggttttgacgag
ctgaagatgagcaatgcgcggcgctacgaggtcctgacggagatcatcacctccctgggc
ctgagctgtgagcagagtcaggccccgcccgccagccctgtctacctcctcgccacctct
gaggagcgcagggccagcttcctcaagtggctgcacacccagttggacaaggaagggctg
ctcaagtgttccaaggcattccttaaagtggtccccagctcagagcttcaggctgggccc
cccctgctgcccaaagggaccctggccctggtcacagatgccccagaggcccagagctgg
gaacagttcagcctgcagacctacagccagcacctggagacccgcactctgggacgcacc
cttctctacactcaggtcacccctaccaccatggacctactagacgggttgatgctccag
ctgcctgagaaaatggggttaactgctgtagcggctcgacagacccagggtagaggccgt
ggggggaatgcttggctgagtcctctggggtgtgccatgtttagtgtgcatgtgcaagtg
gctgtgagttccagactgggccagaggatcccgttcctgcagcacctggctgccctggct
gtggtggaggccgtacgcacccttcccggttaccaggacatcgacctacgggtgaagtgg
cctaatgacatttactacggtaacctgatgaagctaggaggagtgttggtgacatcaaca
gtcatgggaccaaccttccatctcctcattggctgtggctttaacgtcagcaacagcaac
cccaccattgccatcaacgacctggtgatgcagcacaaccgagagcatggcacaagcctg
gaggcccttagctcagcccagctcatcggccgcaccctcacctgcctggagcagctcatc
tctgacttccaagaacgggggtcagaggccgtcctacccctctactacaagagatggatg
cacaatgggacccaggtgcgtctgtggagtgaggatggcccccaggctgtcgtggtgggc
ctcgatgacaacggcttcctgcaggtgcgctccgaggagcagggcgtggtctccgtgcag
cctgacggcaactcctttgacatgctaaggaacctggtggtcaccaagcaacgctag
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