Oncorhynchus gorbuscha (pink salmon): 124000425
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Entry
124000425 CDS
T07892
Symbol
grin3a
Name
(RefSeq) glutamate receptor ionotropic, NMDA 3A
KO
K05213
glutamate receptor ionotropic, NMDA 3A
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04020
Calcium signaling pathway
ogo04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
124000425 (grin3a)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
124000425 (grin3a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ogo04040
]
124000425 (grin3a)
Ion channels [BR:
ogo04040
]
Ligand-gated channels
Glutamate (ionotropic)
124000425 (grin3a)
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GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
124000425
NCBI-ProteinID:
XP_046162730
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Position
LG16:complement(96948921..97053964)
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AA seq
1151 aa
AA seq
DB search
MTGLGIRSTFGRFARLPVLATCTVLLCFLIPESLSHPQPCQILKRIGHTVRVGALHLQPR
LFSHDPTSRGKKEPLVPVDEWDTDGGSREAAERQLEKMTKSVNDHGLRSLRTKGAGNNQQ
KDRGSKSKNMYKQVESGSRVFMPRDSIILAMETLNRMVGLLPYNLSLELVMAVEAGLGEL
PAFSFSSSPTPVCEDPMSFLQSVCHTVIVQGVSAMMAFPQTRDELVKMEFIASALQVPVI
SVVQNEFKRQSKNPLHFQMPMQNPALPQVELLYSLLVINSWYDVSLLLCQEWNVSSFLVR
LRNNTKFHLGSVVNITNSSTSPNSHPNSSVSKANFQTSLRGYLESIKESTSTVVTFGCDI
RDIKRIFNVVTKLGLMLPEYHWVLGDTQDVEELRTEGLPAGLLAHGRMGTPSLDHYVQDG
LELVARVVGLAAYRSPELALIPSITNCMDTQNSQTRNMTSGKYLSRFLSNTSFDGLSGFI
SSQEETVISSESHHFIWSLQHDPIGKPMWARLGRWKHGKVLLDYTAWTNKQPSHQRGDWR
RPSRLHLRVVTLVEHPFVFTREVDEDGLCPAGQLCLNPLTNNTVLLQSLFLQMRGPNDSI
PMEYKKCCYGYCVDLLEKLAEDVGFDFDLYIVGDGKYGGFKNGRWTGLVGDLLSGAAHLA
VTSFSINSARSRVIDFTSPFFSTSLGILVRTRDTAAPIGAFMWPLHWSMWLGIFVSLHVT
ALFLTIYEWNSPFGMTPRGRNRDKVFSFSSALNVCYAILFGRTAAIKPPKCWTGRFLMNL
WAIFCLFCLSTYTANLAAVMVGEKTFEQLSGIHDPKLHHPSQGFRFATVRESSAEDYLKK
SFPEMHEYMRRYNVPATPDGIEHLKHDPQQLDAFIMDKALLDYEVSIDAECKTLTVGKPF
AIEGYGIGLRQNSPLSSNISELVSQYKSDGFMDMLHDKWYKVVPCGKRSFAVTETLQMGI
KHFSGLFLMLCVGLVLSLLTTLAEHIIHRFVIPRVKDPKFKYWLHTSQRLHRAMNISFND
GKLQTVAKKEKRCNMGNHHQQQQEQPCVPWNSSESNCNCNRRKLSPQESHLEYPHCDCPL
LPPPRVKSPLQATSNGRTDLVQVGLKTRTNPMLQELSELETHITIIKQQLHIAMKKKREL
EQYQQTHNMTE
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atgacgggtctcgggattcggagtacgttcggtcggtttgcgcggcttcctgtactcgca
acatgcacggtgcttctctgctttctgattccagaatctctctcccacccgcagccctgt
cagattctcaaacggattggacacacggtgcgcgtcggggctctgcacctacagccacgg
ctcttcagtcacgatcccacctccaggggcaagaaagaaccccttgtccccgtggatgaa
tgggacacggacggaggctcgagggaggcagcggagagacagttggaaaagatgaccaaa
agtgttaatgaccacggtttacgcagcctaaggactaaaggcgcggggaacaaccaacaa
aaggacagggggtcaaaaagtaaaaatatgtacaaacaggtggagagcgggagtcgtgtg
tttatgccaagagattctatcatattagccatggagacgttaaaccgcatggtcggtttg
ttaccgtataatctctcactggagttggtgatggctgtggaagcggggctcggggaatta
cccgctttctccttctcatcttcccctacccctgtgtgtgaagaccccatgtcgtttctg
cagagtgtttgtcatactgttattgtccaaggagtttctgctatgatggctttccctcag
accagggacgagctggtgaagatggaattcatcgcgtcagcgcttcaggttcctgtcatc
agtgttgtccagaacgaattcaaacggcagagtaagaaccctctccatttccagatgccg
atgcagaacccggccctgccccaggtggagctactctactccctgctggtgatcaacagc
tggtatgacgtcagcctcctgctctgtcaggaatggaatgtttccagtttcctggttcgt
ctccgtaacaacaccaagttccacctgggttctgtggtcaacatcaccaactccagcacc
tcgcccaactctcaccctaacagctccgtctccaaggccaacttccagacctctctacgg
ggatacctggagtccatcaaggagtcaacgtctacagtcgtaacattcggctgcgacatc
cgggacatcaagaggatctttaacgtggtgaccaagctgggcctgatgctgccagagtac
cactgggtgttgggggacacgcaggacgtggaggagctgaggaccgaggggctgccggcg
ggactgctggcccatggcaggatggggactccctccctggatcactacgtacaggatggg
ctggagctggtggcccgggtggtggggttagctgcgtaccgctcccctgagctcgccctc
atcccctccatcaccaactgcatggatacacagaacagccagaccaggaacatgacctca
gggaaatatctgtccaggtttctgtccaacacgtcgtttgacggtctgagtggtttcatc
tcgtcccaggaggagacagtgatctcctctgagagccatcacttcatctggtccctgcaa
cacgaccccatagggaagcccatgtgggccaggctgggccgatggaagcatggcaaggtg
ctactggactacactgcctggaccaacaaacagccgtcccaccagagaggtgactggcgg
cgcccgtcgcggctccacctccgggtggtgacgttagtggagcaccccttcgtcttcacc
cgggaggtggatgaggacggtctctgtcccgctggtcagctctgcctgaaccccctcacc
aacaacacagtcctgctccagtctctcttcctccagatgcgggggcccaacgacagcatt
cccatggagtataagaagtgttgctacggctactgcgtcgatctactggagaaactggcg
gaggacgtggggtttgacttcgacctgtatattgtaggcgatggcaagtatggtgggttt
aagaacggacgctggacagggctggtgggggatcttctcagcggagcggcccacctggcc
gtcacatctttcagtatcaactcggcccggagcagggttatagacttcacctccccgttc
ttctccacctctctgggcatcctggtacggacccgggatacggccgcgcccatcggggca
ttcatgtggcccctgcactggtccatgtggctggggatattcgtctcgctacacgttact
gccttgttcctgaccatctacgagtggaacagcccgtttgggatgacgccgcgaggcagg
aacagagataaggtgttctccttctcctcggctctgaacgtctgctatgccatcctgttt
ggccgtacagctgccattaaacctcctaagtgctggacggggcggttcctaatgaatctc
tgggctatcttctgcctgttctgtctgtccacctacacagccaatctggccgccgtcatg
gtgggggagaaaaccttcgagcaactctcaggaatacacgatccaaagcttcatcaccca
tcacaggggttccgcttcgccacggtccgggagagcagtgccgaggattacctgaagaaa
agctttccagagatgcacgaatacatgagacggtacaacgtaccagcaaccccagatgga
atagaacatctgaagcatgatccacagcaacttgatgctttcatcatggacaaggcctta
ctagactacgaggtgtctatagatgcagaatgcaagacactcactgtggggaaaccgttc
gcgattgaaggttatggcatcggcctgcgccagaactctcccctgtcgtctaacatctca
gagctggtgagccagtacaagtcagacggcttcatggatatgctgcatgacaagtggtat
aaggtggtgccctgtggaaaacggagcttcgccgtcactgagaccttacaaatgggcatc
aagcatttctcaggcctgtttttgatgctgtgtgtcgggttggttctgtctctgctcacc
accctggctgaacacataatccaccgctttgtcatacccagagtcaaggaccccaagttc
aagtactggctgcatactagtcagagattacaccgagctatgaacatatctttcaacgac
ggtaaactgcagactgtggccaagaaggaaaaaaggtgcaacatgggtaaccaccaccaa
caacaacaggagcagccatgcgtaccatggaacagctcagagtccaactgcaactgcaac
agaaggaagctgtctcctcaggagtcccacctggagtacccccactgtgactgccctctt
cttcctcctcctcgggtgaagagccccctacaggccacctctaacgggaggacagacctg
gtccaggtgggtctaaaaaccaggaccaaccccatgctgcaggagctgtcagagctggag
acacacattaccatcatcaaacagcagctgcacatcgccatgaagaagaagagggagctg
gagcagtaccagcagacacataacatgacagagtag
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