Oncorhynchus gorbuscha (pink salmon): 124010711
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Entry
124010711 CDS
T07892
Name
(RefSeq) glutamate receptor ionotropic, NMDA 3B-like
KO
K05214
glutamate receptor ionotropic, NMDA 3B
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04020
Calcium signaling pathway
ogo04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
124010711
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
124010711
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ogo04040
]
124010711
Ion channels [BR:
ogo04040
]
Ligand-gated channels
Glutamate (ionotropic)
124010711
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
124010711
NCBI-ProteinID:
XP_046179316
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All DBs
Position
LG23:62951157..63026446
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AA seq
1370 aa
AA seq
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MEYLYLLGRWMCNYFIPIRIRPSPFFTGRFIPLLVFLHGFVFHPDPCLSHPQPCHILARI
GHTVRLGALLPTRQPARVHNALNRALTSLKHRAGEGNPPLLPYNLTLEVVSRSPSGGDPV
SLSRCVCQELVVRGVTGVLAFPRSPEELIHIDFLSSFLEIPFISLLEDLEPLRVKNRFHL
QMSVRVPPSCLANLLGKEERREEKGEEGRGAERSDETGDETREDKREAEVLSLLSRRLLR
SASPLSSVVILGSDPECLSSVLRCAQRLAPSLPALQWIMGNPLSPDSLLSLGGPLGLLAY
GEVGRKPITFYIRDALRLIGQAVTSASEVRADLALIQNLVNCYDKPNKEEVPSSGQYLAR
FLSNTSFQGSTGTVRVAPALSQVLSSQLYHVWSLKRGPLGQPSWVTVAHWTTGRLQLDEG
VWRPGLQMAGRRLRVVTLVEHPFVFTREVDEDGLCPAGQLCLDPRTNRSDLLDSLFSHLH
QTNTTTTTTDHKDQRKCCYGYVIDLLEKLSEDLKFTFDLYIVGDGKYGAMSSTGRWTGLV
GDLLSGTADMAVTSFSINSARSRVIDFTSPFYSTSLGILVRSQDTSAPIGAFMWPLHWSM
WVGIFVTLHLTALFLTVYEWNSPFGMTPHGRNRLRVFSYSSALNLCYAILFGRTVATKTP
KCWTSRFLMNLWAIFCLLVLSSYTANLAAVMVGEKTFEQVSGIHDEKLHHPSRGFRFGTV
RESSAEDYMRKSFSAMHDYMRRYNQPTTPDGVDMLKTDPPLLDAFIMDKALLDYEVSIDA
ECKLATVGKPFAIEGYGMGVAQGSPLTANVSEFISRYKSEGYMDILHEKWYKVVPCGKRV
FTNTENLSMGIDHFSGLFVMLCVGVVGAIFTLAAEHTFYHLALPWLRRSHTLTYWLHTSQ
KIHRALNTPYEDVGKELIGLDHNPSPCVSDSCSLHRHQQPRPPPPPPSSPPPPQPSSPAR
DIKENKRVHFDLESLHSYRLHTHTASFWGRPGMVGRHGLGGCLGGLSPPQVSLHANGGPA
SALASPGLVLPPLGNPGNQAFLWEGELQEVQGRIETFTAQLRDAVARRAEIQTCLENHKM
NQSTATAVKLEKDKVGQSQSLERVRTNAEKDRTKEEREGINQEKDRTKEEREGINQEKDR
TKEEREGINQEKDRTKEEREGINQEKDRTKEEREGINQEKGMSGISNLCSSLDRDRDRDR
DRDRTSRDRSTVRQTARQDTDRDRLLHQSDTERDRDDQSKSLGGNGSSQSHASNILQTGR
NSQSEVLIILQRRREIQSKTSASLDRGTTNQSGAVNTLQGERTVQSRNSTSLERGRARQS
GAVKDQERGRTVQTRTGAGLDRLRASQSSACTGNLVRERPAPVDTQKSLC
NT seq
4113 nt
NT seq
+upstream
nt +downstream
nt
atggagtatttgtatctacttggtcgatggatgtgcaactactttataccaataagaatt
cgcccatctccttttttcaccgggagatttatcccgctgttggtcttcctccatggcttc
gttttccatcccgatccatgcctctcccacccccagccatgtcacatcctggctcggatc
ggacacacggttcgtctcggtgctctgcttcccaccagacaaccagccagggtacataac
gctctgaacagagccttgaccagcctgaagcaccgggctggagaaggcaacccgcctctt
ctgccctacaacctcaccctggaggtggtgtctcggtccccgtctggtggcgaccctgtc
tccctgtccaggtgtgtgtgtcaggagctggttgtgcgaggggtgacaggtgtcctggcc
ttccctcgttcaccagaagaactcatccacatcgacttcctgtcctccttcctggaaata
ccttttatatcactactggaggacctagaaccactcagagttaagaaccggttccatctc
caaatgtcagttcgtgttccaccttcttgcctggccaaccttctagggaaggaggagagg
agggaggagaaaggggaggagggaagaggggctgagagaagtgacgaaacaggtgatgag
accagagaagacaagagggaagctgaggtcttgtctctcctctcccgtcgtcttcttcgc
tccgcctctcctctctcctctgtggtcatccttggttccgacccagaatgtctctcttct
gtcctccgctgcgcccagcgtctcgctccctcgctccccgcgctgcagtggattatgggt
aaccctctgtcacctgactctctcctctcgctgggcgggcccctcggcctattggcttat
ggagaggtgggtcgtaaacccatcaccttctacatccgagacgcactgcggttgattggc
caggcggtgacttcggccagtgaggtgagggcagacctggctctgatccagaacctggtc
aactgttacgacaaacctaacaaagaggaagtgccctcttctggacagtacctggccagg
ttcctctccaacacgtcgttccagggttctacgggcacggtccgtgtggcacctgctctc
tcccaggtcctctcctcccagctgtaccacgtgtggagcctgaagagaggtcctcttggc
cagccgtcctgggtcaccgtggcccactggaccactgggcgtctacagttggacgagggg
gtatggaggccggggctacagatggcgggccggagattaagggtcgtgaccctggtggag
catcccttcgtgttcactagagaggtggatgaggatgggctgtgtcccgctggtcagctg
tgtctggaccctagaactaaccgctcagatctactggactcactgttcagtcacctgcac
cagaccaatacaactactaccactactgaccacaaggaccagcggaagtgttgctatggt
tacgttattgacctgttggaaaagctgtcggaggacctgaagttcacctttgacctttac
atcgtgggagacgggaagtacggagcgatgagcagcactgggaggtggaccggtctggtg
ggagacctgctgagtggaacagcagacatggctgtgacatcattctccatcaactcagcc
aggagcagagttatagacttcacctctccattctactctacctctctgggaatactggtg
cgtagccaagacacatcagctcctattggggccttcatgtggcctctccattggtccatg
tgggtgggcatcttcgtcactcttcatcttaccgcacttttcctcaccgtctatgagtgg
aacagcccctttggtatgactcctcatggcaggaacagactcagagtgttctcctactcc
tcagccctcaacctctgctacgccatcctgtttggacgcactgtcgctactaagactcct
aagtgttggaccagtaggtttctgatgaacctgtgggccatcttctgcctgctggtgttg
tccagttatacagctaacctggctgctgtcatggtgggggagaaaacctttgaacaggtc
tctggaatacatgacgagaagctgcaccacccatcccgtgggttcaggtttgggacagtc
agagagagctctgcagaggactacatgaggaagagtttctctgctatgcatgactacatg
agacgttacaaccaacccaccacaccagacggagtggacatgttaaagacagatcctccc
ctactagatgccttcatcatggataaagctctattggactatgaagtctccatcgatgcc
gagtgtaaactagcgactgtaggcaagccttttgctatagagggttatggtatgggtgtt
gcccaaggctctcctctcactgccaacgtgtctgaattcatcagtcgctacaagtcagaa
gggtacatggacatattacatgagaaatggtacaaggtggtgccatgtgggaaacgagtg
ttcactaacactgagaatttatcgatggggatagatcatttctcaggcctgtttgtgatg
ttgtgtgtgggggtggttggagccatttttaccttggcagctgaacacaccttctatcac
ctagccctgccctggctacgacggtcacacacacttacctactggttgcataccagccag
aagatccatcgagccctgaacaccccttacgaggacgtagggaaagagttgattggcctg
gaccacaatccctccccttgtgtctctgacagctgcagcctccacagacaccagcagcct
cgccctcctcctcctcccccgtcttccccccctcctcctcagccctcctctcctgcccgg
gacatcaaggagaacaagagggtccactttgatctggagagtctacacagctaccgtcta
cacacacacaccgcctcgttctggggacgtcctggcatggtggggcgacacggcctggga
gggtgtctgggtggtttatctcctcctcaggttagcctgcatgctaacggtggcccagca
tcggccctggcctcccccggcctggtcctgcctcctctggggaacccaggcaaccaggct
ttcctgtgggagggagagctccaggaggtccaggggaggatcgagacgttcacagcccag
ctgagagacgccgtggccaggagggccgagatacagacctgcctggagaaccataaaatg
aaccagagcacagctactgctgtcaaactggagaaagacaaggttggccagtcacaaagc
ctggagagagtgagaaccaacgcagagaaagatagaaccaaggaagagagagaggggatc
aaccaggagaaagatagaaccaaggaagagagagaggggatcaaccaggagaaagataga
accaaggaagagagagaggggatcaaccaggagaaagatagaaccaaggaagagagagag
gggatcaaccaggagaaagatagaaccaaggaagagagagaggggatcaaccaggagaaa
gggatgagtggcatatcaaacctctgtagcagcctggacagagacagagacagagacaga
gacagagacaggacaagcagggacagatccactgtgagacaaacagccagacaggacaca
gatagggacagactgttacaccaatcagacactgagagagacagagacgaccaatcaaaa
agcctgggcggaaatgggagcagccaatcacatgcctccaacattctgcagacagggagg
aacagccaatcagaagttctgatcatcctacagaggaggagagagatccaatcaaaaacc
tctgccagcctggacagagggacaaccaaccaatcaggtgctgtcaatacactgcaggga
gaaagaactgtccaatcacgtaactccaccagtctggagagaggaagagccaggcaatca
ggtgcagtgaaagaccaggagagggggagaactgtccaaacacggacaggggctggtctg
gacagactgagagctagccaatccagtgcctgcactgggaatctggttagagaacgtccc
gcccccgtggacacccagaagagtttgtgttag
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