Oncorhynchus gorbuscha (pink salmon): 124011223
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Entry
124011223 CDS
T07892
Name
(RefSeq) aryl hydrocarbon receptor-like isoform X1
KO
K09093
aryl hydrocarbon receptor
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
124011223
Transcription factors [BR:
ogo03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
124011223
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS_11
PAS
HLH
PAS_9
PAS_4
Motif
Other DBs
NCBI-GeneID:
124011223
NCBI-ProteinID:
XP_046180321
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All DBs
Position
LG23:54498394..54582678
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AA seq
1029 aa
AA seq
DB search
MYAGRKRRKPVQKGIEVKDQKEKQTAPSEGTKSNPSKRHRDRLNSELDRLASLLPFPEEV
TSSLDKLSILRLSVSYLRTKNFFSVALKTHACKGFKANSGNHDNSKTSGLVDGWMPEGEL
LLQALNGFVLVITAEGVIFYSSHTIQDYLGFHQTDVMHQSVFELIHTEDQQEFRRNLHWA
LNPPGVPQQGESPPDGKPVPSSSLVTYNPDQLPPENSSFLERNFVCRFRCLLDNSSGFLA
LTLQGRLKFLHGQNCHLDDGCNVPPQLALFAIATPLQPPSILEIRTKNMIFRTKHKLDFT
PMACDAKGKIVLGYTEAELRVRGSGYQFIHAADMLYCAENHVRMIKTGESGLTVFRLLTK
DNRWRWVQANARLVYKNGKPDYIIATQRPLVEEEGGEHLRKRSMHLPFTFATGEALLYQS
SYPIHGLTDSLQTKGKTKSKKAKLDKNSSKDHGGLDPSSLLGALMRQDESVYVCQPAVEP
KMSFHSSLFSERGEGEGQSSGGCSSGPLGGGVGKSWSSVPNGVTTTTSTGPNGEPPPSFD
PLLATLDSLSLEGDETCSNSELFSALENLGLNAEDLELLLLDERMIRVEMDPDYIPSLND
LLTNNEILSYIHDSLENKTEEGQGGDNHVSIPQASTTTHPPGPILNSTLIPNLYNQATPA
MHISTLHPQATIPPIPQPTLPPHRLPKQPPIVQLSQQMQQHLNLVKPVLAKYPWPPTQTD
VPTPSQPDTLQHTTSLTVVDNGHWLHQQEHLHAGLDDHCHSIHPLVNGKTSQLGPQGSGQ
LKHHQHQNIIHLQSQWQQQNQHLQVQLQPQCHFKQQKASSNSGATLNGVHPDPDWQRYGY
DDQLGLTANGACTVSYTNGRADTLSHATGGEVTLTDYGTGASTTVGMVMNWGTVGGTGHY
QGKGGVTATPSDHLEHHKQHSPLVPSAYFHRQYPTTQNSLDYILGLSQPQHTMPSLGAYG
ILNRPASQDATHCKMESGCILNDTNVAHTGSCLLPDVNGQAASDSLHPQPGALQTPPTLP
DPQTTGFYL
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgtatgctggacggaaaagaagaaaaccggtgcaaaaaggcatcgaagtgaaagaccaa
aaagagaaacagacagctccgtctgaagggaccaagtctaacccatcaaagcgccaccgg
gaccgtctgaactctgagttagaccgtctggccagtctactgcccttcccagaagaggtc
acctccagcttggataaactctctatcttacggctcagcgtgagctacctgaggaccaag
aacttcttctcagttgccctgaagacccacgcttgcaagggttttaaggccaacagtggt
aaccatgacaacagcaagacatcgggattggtggatggctggatgcccgagggtgaactc
ctattgcaggcccttaatggctttgtcctggtcatcactgcagagggggtcatattctac
tcctctcacaccattcaggattacctgggattccaccaaacagacgtgatgcaccagagt
gtatttgagctgatccacactgaggaccagcaggagtttaggaggaacctccactgggct
ctcaaccccccgggcgtgccccagcagggggagtcacccccagatggaaagccagtcccc
agctcatccctggtgacctataaccccgatcagctgcctccagagaactcctccttcctg
gagaggaacttcgtctgtcgcttccgctgtctcctcgacaattcctctggcttcctggcc
ctgaccctccagggccgtctgaagttcctgcatggccagaactgccacctggatgacggc
tgcaacgtgcccccccaactggccctgtttgccatcgctacccccctccagcctccatcc
atcctggagatcaggaccaagaacatgatcttcaggaccaaacacaagctggacttcacc
cccatggcctgcgacgccaaggggaagatcgtgctgggctacactgaggctgagctccgg
gttagaggctctggataccagtttatccatgcagctgatatgctctactgtgctgagaac
cacgtccgcatgatcaagaccggagagagcgggctgacggtgttcagactgctcactaag
gataaccgctggaggtgggtccaagccaacgccagactggtctacaagaacggcaagcct
gactacattatcgccacccagaggcccctggtggaggaggagggaggagagcacctgagg
aagcgttccatgcacctccccttcaccttcgccacgggcgaagcacttctctaccagagt
agctaccccatccacggcctcaccgactcactccagactaaaggcaagaccaagtccaag
aaggccaagctggacaagaactcgtcgaaggatcacggtggactggaccccagctccctg
cttggggcattgatgcggcaggatgagtccgtgtacgtgtgccaaccagccgtcgagccc
aagatgtccttccacagtagtctgtttagtgagcgaggcgagggggaagggcagagcagt
ggaggctgtagcagtggccctctgggtgggggtgtgggaaagagctggagctccgtgccc
aacggggtcaccaccaccacctccactggccccaacggggagcctccacccagcttcgac
ccactgctcgccaccctggactcactatctctggagggggacgagacatgctctaacagc
gagctgttctctgctctggagaacctgggtctgaacgcagaggatctggagctactgctg
ctggatgagaggatgatcagagtggagatggatccggactacatcccctcgctcaacgac
ctgctcaccaacaacgagatcctctcctacatccacgactcgctggagaacaagaccgag
gagggccagggtggggacaatcacgtgtccataccacaagcctcaaccacaacccatccc
cctggccctatccttaattctacccttatccctaacctttataaccaagccacccccgct
atgcatatctctaccctccacccccaggctactatcccacctatcccccaacccacgtta
ccccctcacagactaccaaagcagccacccatagtgcagctctcccagcagatgcagcag
cacctcaacttagtaaagcccgttctggcaaaatacccctggcccccgacacaaacggac
gtccccacgccaagccagccagacacactgcagcacacaacctcactaacagtggtcgat
aatggtcactggcttcaccagcaggagcatctgcatgcggggctggacgaccactgccac
agcattcaccctctggtcaacggtaagacatcccagctggggcctcaagggtccgggcag
ctcaaacaccaccagcaccagaacatcatccatcttcagagccagtggcagcagcagaac
cagcacctacaggtccagcttcagcctcagtgccatttcaaacagcagaaggcaagtagc
aacagcggtgccactctcaacggggtgcaccctgatcccgattggcagaggtacggctac
gacgaccagttgggactgaccgctaacggagcctgcaccgtctcctacaccaacgggcgc
gcggacaccctctcacacgctacaggaggtgaggtcactctcacagattacggtacgggt
gcttcgactaccgtgggcatggtgatgaactggggtacggtggggggcacaggtcactac
cagggaaaaggcggggtgactgctaccccctcagaccatctggagcatcacaaacaacat
tctccactggtcccatccgcctactttcaccgccagtaccccaccacccagaactcctta
gattacatcctggggctgtcacagccgcaacacaccatgccttctctgggcgcctacggc
attttgaatcgccccgcttcccaagatgccactcactgcaagatggagagcggctgcatc
ctcaacgacaccaacgttgctcacacagggagctgtctactgcccgatgtgaacggccag
gcagccagcgacagtctccacccccagcccggcgccctacagaccccgcccaccctccca
gacccacagactactggcttctacctctga
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integrated database retrieval system
