Oncorhynchus gorbuscha (pink salmon): 124019536
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Entry
124019536 CDS
T07892
Symbol
polr3a
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase III subunit RPC1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03020
RNA polymerase
ogo04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
124019536 (polr3a)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
124019536 (polr3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ogo03021
]
124019536 (polr3a)
Enzymes [BR:
ogo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
124019536 (polr3a)
Transcription machinery [BR:
ogo03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
124019536 (polr3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
124019536
NCBI-ProteinID:
XP_046190857
LinkDB
All DBs
Position
Unknown
AA seq
1271 aa
AA seq
DB search
MGYLDGSLDRGLSSKRIPLYTRIGERLQKYWNNADVSQGARSHICFGMKSAEQMRQQAHI
QVVSKNLYSQDTSHTPLPYGVLDHRMGTSEKDRPCETCGKNLADCLGHYGYLDLEMPCFH
VGYFKATIGILQARPVKLVVEDPPEKYKTIKKVVTLGLLNRAQENLSPLVVLNLFRRIPA
EDIPLLLMNPEAGKPADLILTRLLVPPLCIRPSVISDLKSGTNEDDLTMKLTEIIFLNDV
IKKHRMSGAKTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRF
RGNLSGKRVDFSGRTVISPDPNLRIDEVAVPVHVAKILTYPEKVNKANLEMLRKLVRSGP
EVHPGANFIQQRHTQMKRFLKYGNREKMAQELKFGDVVERHMIDGDIVLFNRQPSLHKLS
IMAHIAKVKPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALVLMGTKANLVTP
RNGEPLIAAIQDFLTGAYLLTLKDTFFDRSKACQIVASILVGVDERIKIALPHPAILKPM
TLWTGKQIFGLILKPSKACPVKANLRTKGKQYSGKGEDLCSNDSFVVIQNSELMCGTMDK
GTLGSGSKKNIFYILLRDWGQLEAANAMSRLARIAPTYLSNRGFSIGIGDVTPGQGLLKA
KQDLLDGGYAKCDEYIEALKTGKLQQQPGCTAEETLEALILKELSVIRDHAGSACLRELD
KTNSPLIMALCGSKGSFINISQMIACVGQQAISGSRVPDGFENRSLPHFEKHSKLPAAKG
FVADSFYSGLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRS
STGDIIQFVYGGDGLDPAAMEGKDEPLEFNRVLDNIREIKKFIKSTSEKIKKTRDKYGIN
DNGTTEPRVLYQLDRITPSQLEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQMTL
KTFHFAGVASMNITLGVPRIKEIINASKNISTPIISAHLDVDDTQTXPGRLVKGRIEKTL
LGEISEYIEEVFLPDDCFILVKLSLERIRLLRLEVNAETVRYSICMSKLRVKPGDIAVHG
EAVVCVSPRENSKSSMYYVLQSLKDNLPKVVVQGIPEVSRAVIHIDEQTGKNKYKLLVEG
DNLRSVMATHGVNGNRTTSNNTYEVEKTIGIEAARSTIINEIQYTMVNHGMSIDRRHVML
LADLMSYKGEILGITRFGLAKMKESVLMLASFEKTADHLFDAAYFGQKDSVCGVSECIIM
GIPMNICSLLH
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atgggatacctagatgggtctctggacagaggtctgagcagtaagaggatcccactgtac
accagaattggagagcgcttacagaaatactggaacaatgctgacgtgagccaaggcgct
agaagccacatctgttttgggatgaagtcggctgaacagatgagacagcaggctcatatc
caagtggtcagtaagaacctgtacagccaggacaccagccatactcctctaccgtacgga
gtactggatcatcgcatgggcaccagtgagaaggatcgtccttgtgagacgtgtgggaag
aacctggctgactgtctgggacactatgggtatctggacctggagatgccctgttttcat
gtgggctatttcaaagccaccattggaatcctacaggcaagaccagtgaagcttgttgtt
gaagatcctcccgagaaatacaagacaatcaagaaagtggtgacattgggcttgcttaac
agggctcaggagaacctgagtcctctagtggtgctgaacctcttcaggaggataccagcg
gaggacattcccctgctcctgatgaaccctgaggcaggtaagcctgcagacctcatcctc
acccgcctgctggtacctccgctctgcatccgcccctctgtcatctcagacctcaagtcg
ggtactaatgaggatgacctcaccatgaagctcacagagatcatcttcctcaatgatgtc
atcaagaagcaccgtatgtcaggggccaagacccagatgatcatggaggactgggacttc
ctccagctgcaatgtgctctctacatcaacagtgagctctctggcatccccctcaacatg
gcccctaagaagtggaccagaggcttcgttcagagactcaagggcaaacaagggcgattc
cgtggaaacctctcggggaagagagtggatttctctgggagaacggtcatctctccggac
cccaacctgcggattgatgaggtggctgtccctgtgcacgtagccaaaatcctgacctac
ccagagaaggtgaacaaggccaacttggagatgctgaggaagctggtgcggagcggtcca
gaggtccaccctggagccaacttcatccagcaacgacacacgcagatgaagaggtttctg
aagtacgggaaccgagagaagatggcccaggagctgaagtttggagacgtggtggagaga
cacatgatcgatggagacatcgtcctcttcaaccgacagccctctctacacaaactcagc
atcatggctcatattgccaaagtgaagcctcacagaacgttccggtttaacgagtgtgtg
tgcacgccgtacaacgctgactttgacggggatgagatgaaccttcaccttccccagaca
gaggaggccaaggctgaagccctggtgctgatggggaccaaagccaacctggtgaccccc
aggaacggagagcctctgattgctgctattcaagactttctgacaggagcctacctgttg
accctgaaggacacattcttcgataggtctaaagcctgccagatagtggcctctatcctg
gtgggggtggatgagaggatcaagatagctctcccacaccctgccatactcaagcccatg
actctgtggacagggaagcagatatttggtctgatcctgaagcccagtaaggcctgtcca
gtcaaggccaacctgaggaccaaggggaaacagtacagtgggaaaggagaggacctctgc
agcaacgactccttcgtggttatccagaacagtgagttgatgtgtggtaccatggataag
ggcacgttgggctctggctccaagaagaacatattctacatcctgctgagagactgggga
cagctggaggcagccaacgccatgtctcgtctggcccgcatcgcccctacatacctctcc
aaccggggtttctccatcggtattggtgacgtgaccccaggccagggtctgctgaaggcc
aaacaggacctgctggatggaggctatgccaagtgtgacgagtacatcgaggccctgaag
acaggcaaactgcagcagcagccgggctgcacggctgaggagacgctggaggccctcatc
ctgaaggagctgtctgttatcagagaccatgccggcagcgcctgcctcagagaactggac
aagaccaacagtcctctgattatggctctgtgtggctccaaaggatccttcatcaacatc
tcccagatgatcgcctgcgtgggccagcaggctataagcggctctcgagtgcccgacggc
tttgagaaccgctcgctgccgcactttgagaagcactctaaacttcctgcggctaaaggg
tttgtagctgacagcttttattcagggctgacgccaacagagttctttttccacactatg
gccggtcgagagggcttggtggacaccgctgttaaaacagcagagaccggatacatgcag
aggcgcctggtgaagtcgctggaggacctgtgttcccagtatgatctgacggtacggagc
tccactggtgacatcatccagtttgtctacgggggggacggcctggacccggccgccatg
gaggggaaagatgagccgttggagttcaacagagtcctggacaacatccgggagatcaaa
aagttcatcaagtctacatctgagaaaatcaagaagaccagggacaaatacggcatcaac
gacaatggcaccaccgagcccagagttctgtatcagttggaccgcatcactcccagccag
ctagagaagtttctggagacctgcagggacaagtacatgagagctcagatggagccgggc
tcagcagtaggagccctgtgtgcccagagcattggggagcctggcacccagatgaccctg
aaaaccttccactttgctggggtagcctccatgaacatcaccctgggggtcccgcgcatc
aaggagatcatcaacgcttccaagaacatcagcacacctataatcagcgctcacttggat
gtggacgacacgcagacttaaccaggccggctggtgaaagggaggattgaaaagaccctt
ctgggagagatttcagagtacattgaagaggtgtttctgccagacgactgtttcattctg
gtcaagctgtcactggagaggatcagactgctacgactagaggtgaatgcagagacagtc
cgctactctatctgcatgtctaagctgagagtgaagcctggagacatagctgtacacggg
gaggcagtggtctgtgtatctcccagggaaaacagcaagagctccatgtactacgtcctc
cagtctctaaaggataacctgcccaaggtggtggtacagggtatccctgaggtctccaga
gctgtcattcacatcgacgagcagactggcaagaacaagtacaagctgctggttgaggga
gacaacctacgcagtgtcatggcaacccacggtgtcaacggcaacaggaccacctcaaac
aacacctatgaggttgagaagacgattggtattgaggctgctcggtccaccatcatcaat
gagatccagtacaccatggtgaaccacggcatgagcatcgacaggcgacacgtcatgctc
ctggctgacctcatgtcctataagggtgagatcctgggtatcacccggtttggcctggct
aagatgaaggagagcgtgttgatgctggcgtccttcgagaaaactgccgaccatctcttt
gacgctgcgtactttggtcagaaggactcggtctgtggtgtatctgaatgcatcatcatg
ggaatccccatgaacatctgttctctcttacactga
DBGET
integrated database retrieval system
