Oncorhynchus gorbuscha (pink salmon): 124032167
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Entry
124032167 CDS
T07892
Name
(RefSeq) LOW QUALITY PROTEIN: integrin alpha-5-like
KO
K06484
integrin alpha 5
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03266
Virion - Herpesvirus
ogo04145
Phagosome
ogo04510
Focal adhesion
ogo04512
ECM-receptor interaction
ogo04810
Regulation of actin cytoskeleton
ogo04820
Cytoskeleton in muscle cells
ogo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
124032167
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124032167
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
124032167
09144 Cellular community - eukaryotes
04510 Focal adhesion
124032167
09142 Cell motility
04820 Cytoskeleton in muscle cells
124032167
04810 Regulation of actin cytoskeleton
124032167
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
124032167
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ogo04147
]
124032167
04515 Cell adhesion molecules [BR:
ogo04515
]
124032167
04090 CD molecules [BR:
ogo04090
]
124032167
Exosome [BR:
ogo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
124032167
Cell adhesion molecules [BR:
ogo04515
]
Integrins
Integrin alpha subunits
124032167
CD molecules [BR:
ogo04090
]
Proteins
124032167
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Integrin_alpha
Tudor_3
DctQ
Motif
Other DBs
NCBI-GeneID:
124032167
NCBI-ProteinID:
XP_046200286
LinkDB
All DBs
Position
LG03:88268463..88354931
Genome browser
AA seq
1054 aa
AA seq
DB search
MGSKRYHSNTPGKLNYSLFCIGVCLIILLPLCDTFNLDVENPSVYSGPNGSYFGYSVEFY
LTNSSSVSVVIGAPKANTSQFNITEGGSVYFCPWSLGQSECHNIEFDNQGDRIVTVSGTD
YKAEVKSHQWFGATIRSHGDTILACAPLYSWRTKAEKPQSDTTGTCYLSVKNFTKFVEYA
PCRTEFINQGGQGYCQGGFSADFTKDGKVVLGGPGSFFWQGQVISAAKEEIIKAYYPGYF
MQSVEGQTQTRQAQIKYDDSYHGYSVAVGEFSGDDVEDVVAGVPKGVMLYGLVSVLNGTD
LKSMLNYTGEQMGSYFGYTVSTADINNDGMSDLLVGAPMYMTRGSDGRLEEVGRVYLYLQ
RGPLDLEPTLNLTGTQVFGRFGSTIAPLGDLNLDGYNDLAISCPFGGEDQQGLVLIYNGF
AGGLRNTPSQVIAGQWASGTVPASFGFSLRGAKDQDMNGYPDLIVGAFGVDKAILYRSRP
IVNTSASLTIYPTMINPEEKSCSVSWXNCIISVSCVNLSFCLSANGKYLPDNLGFLVEVQ
LDHLKHMQKGGVKRALFVDSQQAMLQRSVRVRSGERVCHETKIYLRDDKEFRDKLSSIYI
SLNFSLDPQAAFDSHGLRPILNYKTTELIEQKAQILLDCGEDNICVPDLKLAVHGDRKEV
YLGDDNLLTLTFNARNEGEGGAYEAELYVVLPPEADYSGIARNNESLTQLTCSYEAENQT
RYLSCDLGNPMKSGTSLWAGLRFTVPRLKDTRKTVQFELQIRSKNENNSHSEVVPYKLEV
VVQADVILQGVSRPDKVFFPPLNWKVSKTPQEEQDIGPVIQHVYELVNKGPSGISHTVLQ
LSCPLSVQGQGLLYPLEMSTEGPLNCTTNHSINYLQLKLQQTSTEQPPLLVPGQDHHIER
REVQRDQLAEHTNLSCSNVECWTLQCDVGLLEKGTSAILKLRSLIWAETFIERAYKGYVL
ECLARFSVVKMPYAILPKEVPSGSKKVVTPLVWNKQDSQYSVPLWIIILAILAGLLLLAL
LIYVLYKLGFFKRSLPYGTAMEKAQLKPQAASEA
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atgggttccaaaagataccattcgaatacaccgggaaaattgaactactcattattctgc
attggggtttgtctaataattctgctaccgttgtgtgatacattcaacttggacgtggag
aacccttctgtctacagcggacctaatgggagctactttggatattccgtggaattttac
ttgaccaattcttcaagcgtcagtgtagtgattggcgctcccaaggccaataccagtcag
ttcaacatcacagagggcgggtctgtgtacttctgcccatggagtctcggccaatctgag
tgccacaacattgaatttgacaatcaaggggaccgcatagtcactgtcagtggcacagac
tacaaggctgaagtcaagtcccaccagtggttcggcgccaccatccgttcccacggagac
accattctggcatgtgcccccctctactcctggagaaccaaagcagaaaagccccagtca
gataccacgggaacctgctacctctctgtcaagaacttcaccaagtttgtggaatatgct
ccctgtcgcacagaattcattaaccagggtggtcagggctactgtcaggggggattcagt
gctgatttcacaaaggatgggaaagtggtgcttggaggaccaggcagcttcttctggcaa
ggtcaggtgatctcagcagccaaagaggaaataatcaaggcctactatccagggtacttc
atgcagtctgtggagggacagacccagaccagacaggctcagatcaaatatgacgacagc
taccacggttactctgttgcagttggggaattcagtggagatgacgtggaagatgttgtg
gctggggtcccaaaaggggtcatgctctatggtttggtgtctgttttaaatggcactgat
ctgaagtccatgctcaactacactggcgaacagatgggctcctattttgggtatactgtg
tccacagccgacatcaataacgacggcatgtctgacctgttggtgggagctccaatgtac
atgacccgagggtcagacggccgtctggaggaggtgggacgtgtgtacctctatctgcag
cgtggaccactggacctggagccaactctcaacctgaccgggacccaggtgtttgggagg
tttggcagcaccatcgcacctctgggagacctcaacctggacggatacaatgacttggcc
atcagctgtcctttcggtggagaggaccagcagggattggttctcatctacaacggattc
gccggtgggctcaggaacacaccctctcaggtcatagctggccaatgggcttcaggcaca
gtgccggccagctttggattctcactccgaggtgctaaggatcaggacatgaatggctac
ccagatcttattgttggtgctttcggagttgacaaggcgattttgtacagatcccggccc
atcgtcaacaccagcgcctccctgaccatctatcccacaatgatcaaccccgaggagaag
agttgttcagtctcctggtaaaactgcatcatatctgtctcctgtgtcaacctgagtttc
tgcctctctgccaatgggaagtacctaccagacaacctaggcttcctggtagaggtgcag
ttggaccatctgaaacacatgcagaagggaggggtgaagagggctctgtttgtagactcc
cagcaggcaatgcttcagaggagtgtgagggtgcggagcggagagcgtgtgtgtcacgag
accaagatctacctgagggatgacaaggagttcagagataagctctcctccatctacatc
tccctcaacttcagtctggatcctcaggcagcgtttgactcccatggcctcagacccatc
cttaactacaagaccaccgagctcatcgagcagaaggcccagattctgctggactgtgga
gaagacaacatctgtgttcccgacttaaagctggcggtgcacggggacaggaaggaagtg
tacctaggtgacgacaacttgctgaccttgactttcaacgcgcggaacgaaggtgaaggt
ggggcctatgaggctgaactgtatgtggtgttacctcctgaagcagactacagcggtata
gctcgcaataacgagagcctgacccagctgacctgtagctacgaggctgagaaccagacc
cgctacctcagctgtgacctgggcaatcccatgaagtctggcaccagcctgtgggcaggc
ctgcgtttcactgtgccacgactgaaggacacacgcaagacggttcagtttgagctgcag
atccgcagtaaaaatgagaataattcccacagtgaggtggtgccctacaaactggaggtg
gttgtccaggccgatgttattttacagggtgtctcccggccagacaaggtcttcttccct
cccctcaactggaaggtctccaagaccccccaggaggagcaggacattgggcctgtaatc
caacacgtctatgaactggtgaacaaaggtcccagtgggatcagccacacagtgctgcag
ctcagctgtcctctcagtgttcagggccagggtctcctctaccccctggagatgtctact
gagggacccctcaactgcaccaccaaccactccatcaactacctgcagctcaagctccag
cagacatccacagagcagccgcccctacttgtgcctggtcaggatcaccacatcgagagg
agagaagtccagagagaccagctggcagagcacactaacctgtcctgctctaacgtggag
tgctggacactgcagtgtgacgtgggtcttctggaaaaggggaccagcgccatcctcaaa
ttgcgctccctcatctgggctgagaccttcatcgagagggcatacaagggctacgtgctg
gagtgcctggcaaggttcagtgtggtcaagatgccctatgccatcttgcccaaggaggta
ccgagtggatctaaaaaggtggtgaccccattggtgtggaacaaacaagacagccaatac
tctgtgcccttgtggatcatcattctggccatactggctgggcttctgctgctggcactg
ctcatctacgtcctgtacaaacttggcttcttcaaaaggtcgctaccctacggcacggct
atggagaaggcccaacttaagccccaggctgcgtctgaggcctaa
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integrated database retrieval system
