KEGG   Oncorhynchus gorbuscha (pink salmon): 124034025
Entry
124034025         CDS       T07892                                 
Name
(RefSeq) interleukin-1 beta isoform X1
  KO
K04519  interleukin 1 beta
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04010  MAPK signaling pathway
ogo04060  Cytokine-cytokine receptor interaction
ogo04217  Necroptosis
ogo04620  Toll-like receptor signaling pathway
ogo04621  NOD-like receptor signaling pathway
ogo04623  Cytosolic DNA-sensing pathway
ogo04625  C-type lectin receptor signaling pathway
ogo05132  Salmonella infection
ogo05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    124034025
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    124034025
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    124034025
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    124034025
   04621 NOD-like receptor signaling pathway
    124034025
   04623 Cytosolic DNA-sensing pathway
    124034025
   04625 C-type lectin receptor signaling pathway
    124034025
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    124034025
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    124034025
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:ogo04052]
    124034025
   00536 Glycosaminoglycan binding proteins [BR:ogo00536]
    124034025
Cytokines and neuropeptides [BR:ogo04052]
 Cytokines
  Interleukins
   124034025
Glycosaminoglycan binding proteins [BR:ogo00536]
 Heparan sulfate / Heparin
  Cytokines
   124034025
SSDB
Motif
Pfam: IL1 IL1_propep
Other DBs
NCBI-GeneID: 124034025
NCBI-ProteinID: XP_046202614
LinkDB
Position
LG04:37002336..37008032
AA seq 280 aa
MDRTELYKGMLLFSRSNYTDMDFESNYSLIKNTSESTAWSSKLPQGLDLEVSHHPITMRH
IANLIIAMERLKGGEGVTMGTEFKDKDLLNFLLESAVEEHIVLELESAPSTRRRAAGFSS
TSQYECSVTDSENKCWVLMNEAMELHAMMLQGGSSYHKVHLNLSSYVTPVPVETEARPVA
LGIKGSNLYLSCSKSGGRPTLHLEEVADKEQLKSISQQSDMVRFLFYRRNTGVDISTLES
ARFRNWFISTDMQQDYTKPVDMCQKAAPNRLTTFTIQRHN
NT seq 843 nt   +upstreamnt  +downstreamnt
atggacaggacagagctttacaaagggatgcttttattttccagatctaactacacagac
atggattttgagtcaaactacagtttaataaagaacacctctgaaagcacagcatggagc
tccaagctgcctcagggtctggatctggaggtatcccatcaccccatcaccatgcgccac
attgccaacctcatcatcgccatggagaggttaaagggtggcgagggggttaccatggga
accgagttcaaggacaaggacctgctcaacttcttactggagagtgctgtggaagaacat
atagtgttggagttggagtcggcaccctcaacgaggaggagggcagcagggttcagcagt
acatcacagtatgagtgtagcgtcactgactctgagaacaagtgctgggtcttgatgaat
gaggctatggagctgcacgccatgatgctccagggaggcagcagctaccacaaagtgcat
ttgaacctgtcttcgtacgtcacgcctgtccccgttgagactgaagccagacctgtagcc
ctaggcataaagggatccaacctctacctgtcctgctccaaatcgggaggcaggcccacc
ctgcaccttgaggaggttgcggacaaggagcagctgaagtccatcagccagcagagcgac
atggtgcgtttccttttctacagacggaacaccggggttgacatcagtaccctggagtct
gccaggttcaggaactggttcatcagcacggacatgcagcaggactacaccaaaccggtg
gacatgtgtcagaaggcagcccccaaccgccttaccaccttcaccatccagcgccacaac
taa

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