Oncorhynchus gorbuscha (pink salmon): 124034988
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Entry
124034988 CDS
T07892
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase III subunit RPC2-like
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03020
RNA polymerase
ogo04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
124034988
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
124034988
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ogo03021
]
124034988
Enzymes [BR:
ogo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
124034988
Transcription machinery [BR:
ogo03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
124034988
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
124034988
NCBI-ProteinID:
XP_046204334
LinkDB
All DBs
Position
LG01:23626468..23683026
Genome browser
AA seq
1130 aa
AA seq
DB search
MEILGEEFGDMTHQQLAAPVNTIEEKWKLLPAFLKVKGLVKQHIDSFNYFINVEIKKIMK
ANEKITSDADPMWYLKYLNIYVGMPDVEESFNVTRPVSPHECRLRDMTYSAPITVDIEYT
RGSQRIIRNALPIGRMPIMLRSSNCVLTGKTHMEYSKLNECPLDPGGYFIVKGQEKVILI
QEQLSKNRIIVEQDRKGAVGASVTSSTHEKKSRTNMIVKQGRFYLRHNALSEDAPIAIIF
KAMGVESDQEIVQMIGTEEHVMANFSPSLEECQKAQIFTEIQALKYIGNKVRRQRMWGGP
KKTKMEEARELLASLILTHVPVKEFNFRAKCIYLAVMVRRVILAQGENKVDDRDYYGNKR
LELAGQLLSLLFEDLFKKFNSELKKISDQIIPKQRAAQFDIVKHMRQDQITNGMVNAIST
GNWSLKRFKMDRQGVTQVLSRLSFISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCP
SDTPEGEACGLVKNLALMTHITKTWSKIPMEAGLQPGSKDVNLLCGMXSKSKVFLVFLNG
NILGVIRDHQRLVYTFRLMRRAGFINEFVSISTNLTDRCVYVSSDGGRLCRPYIIVKKGQ
PMVKNKHIEELTQGYRTFEDFLHESLVEYLDVNEENDCQIALYEHMINKDTTHLEIEPFT
LLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIGYNQRNRIDTLMYLLGYPQKPMVKTR
TIELIDFEKLPAGQNATVAVMSYSGYDIEDALILNKASLDRGFGRCLVYKNAKCTLRRYT
NQTFDKVMGPMLDAATRKPIWRHSILDADGICCPGEKVENKQVLVNKSMPTVTQTPLEGS
AQPGQPQYRDVPVSYKGSTDSYIEKVMISSNADDAFLIKILLRQTRRPEIGDKFSSRHGQ
KGVCGLIVPQEDMPFCDSGICPDIIMNPHGYPSRMTVGKLIELLAGKAGVMDGRFHYGTA
FGGSKVKDVCEDLIRYGYNYQGKDYVTSGITGEPIEAYIYFGPVYYQKLKHMVLDKMHAR
ARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISSDAFEVDVCGQC
GLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKLSRYNE
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atggaaatccttggagaggagtttggagatatgactcaccagcagctcgcggctcctgtc
aatactatagaggaaaaatggaaactattgccagcttttttgaaggtgaaaggtctggtg
aaacagcacattgactccttcaactacttcatcaatgtggagataaagaagataatgaaa
gcaaatgaaaagatcacaagtgatgctgatcccatgtggtacctaaagtacctcaatata
tacgtaggcatgcctgatgttgaagagagcttcaatgtaaccagaccagtgtctccacac
gagtgtcgtctcagggacatgacttactctgcacccatcacagtggacatcgagtacacc
cgtggcagtcagagaatcatccgcaatgctctgcccatcggaaggatgcccatcatgctg
cgcagctctaactgtgtcctcacggggaagacgcacatggagtactccaaactcaacgag
tgccctctggacccagggggctatttcattgtcaaaggtcaggagaaggtcattctgatc
caggagcagctgtcaaagaaccgcatcattgtggagcaggacaggaagggggcagtagga
gcctctgtgaccagttccacccatgagaagaagagcaggaccaatatgatcgttaagcag
ggacgcttctacctaagacacaacgcactgtcagaggatgcccccattgccattatattc
aaggctatgggtgtggagagtgaccaggagatagtgcagatgattgggacagaggagcac
gtcatggctaacttctcccccagcctggaagagtgccagaaagcccagatcttcactgag
atacaggctctgaaatacattgggaataaggtgcggagacagcgcatgtggggagggcct
aagaagaccaagatggaggaggccagagagctgttggcttccctcatcctcactcatgta
cctgttaaggagtttaacttccgggccaagtgtatctacctagcggtgatggtgcgcagg
gttatcctagcccaaggagagaacaaggtggatgaccgagactactatggcaacaagcgc
ctggagttggctggacagctgctgtctctgctgtttgaggatctctttaagaagttcaac
tccgagctgaagaagatctcagaccagatcatccccaagcagcgggcggcacagtttgac
attgtcaaacacatgcgccaggaccagatcaccaacggcatggtcaacgccatctccacc
ggtaactggtccctgaagaggtttaagatggaccgtcagggtgtgacccaggtgctgtcc
cgtctctccttcatctctgctctgggcatgatgaccaggatctcctcccagtttgagaag
accaggaaggtcagcggaccccgctccctgcagccctcccagtggggcatgctgtgcccc
tctgacacccctgagggagaggcctgtggtctggtgaagaacctggccctgatgacacac
atcaccaaaacatggagcaaaatccccatggaagctggccttcaacctgggagtaaggat
gtcaacctgctgtgtggaatgngctccaagtccaaagtcttcctggtcttcctcaatggt
aacatcctgggggtgatccgggaccaccaaaggctggtgtacaccttcagactgatgcga
cgggctggattcatcaacgagtttgtgtccatctccaccaacctaaccgaccgctgtgtc
tacgtctcctcagatggaggacgcctctgcagaccgtatatcattgtgaagaaaggacag
ccaatggttaagaacaaacacatcgaggagttgacccagggatacagaacctttgaggat
ttcctccatgagagcttggtggagtacctggacgtgaacgaggagaatgactgtcagatc
gccctctatgagcacatgattaataaggatactacacacttggagattgagcccttcaca
ctactaggggtctgtgctggtctgatcccctaccctcatcacaatcagtcccccaggaac
acataccagtgtgctatgggcaagcaggccatgggtacgattggctataaccagaggaac
cgtatagacactctgatgtacctgctgggctaccctcagaagcccatggtcaagactaga
accatagagctgatagactttgagaaactgcctgcgggccagaacgccacagtggctgtg
atgagctacagcggctacgacatagaggatgctctgatcctcaacaaggcctctctagac
agaggatttggaagatgcctggtctacaagaacgctaagtgcacgttgaggcgctacacc
aaccagacctttgacaaggtgatgggtcccatgctggatgcggccacacgcaagcccatc
tggaggcacagtatcctggatgctgacggcatctgctgccctggtgagaaggtggagaat
aagcaggtgctggtgaacaaatccatgcccactgtcacccagacaccactggagggcagt
gcccagccaggacagccccagtacagagatgtgcccgttagttacaagggctccacagac
tcctacatcgagaaggtgatgatctcctccaacgcagacgatgctttcctcatcaagatc
ctgctgagacagaccaggagaccagagataggagacaagttcagcagtcggcatggacag
aaaggtgtatgtggccttatcgttcctcaggaggacatgcccttctgtgactcgggcatc
tgccctgatatcatcatgaacccgcacggctacccctccagaatgacggtggggaagctg
attgagctgctggctggtaaagcgggggtgatggacgggaggttccactacggcacggcc
tttgggggcagcaaggtaaaggacgtttgcgaggacctgatccgctatgggtacaactac
cagggcaaggattacgtcacctctggcatcactggagagccaattgaggcctatatctac
tttggacctgtgtattatcagaaactaaagcacatggtgctggacaagatgcacgccaga
gcccgcggcccccgagctgtgctcaccagacagcccacggaggggcgctctagagacgga
ggcctacgtctgggggagatggaacgtgactgtctgattggctacggggccagcatgttg
ctgctggagcgcctcatgatctccagtgatgccttcgaggtggacgtgtgcggtcagtgt
ggcctgctgggatactccgggtggtgccactactgtaagtcctcctgtcacgtgtcctcg
ttacggataccctacgcctgcaaactgctcttccaggagctgcagtccatgaacatcatt
ccccgcctcaaactgtcacgctacaacgagtaa
DBGET
integrated database retrieval system
