Oncorhynchus gorbuscha (pink salmon): 124035551
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Entry
124035551 CDS
T07892
Name
(RefSeq) 72 kDa type IV collagenase-like
KO
K01398
matrix metalloproteinase-2 (gelatinase A) [EC:
3.4.24.24
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
124035551
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ogo01002
]
124035551
Enzymes [BR:
ogo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.24 gelatinase A
124035551
Peptidases and inhibitors [BR:
ogo01002
]
Metallo peptidases
Family M10
124035551
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M10
fn2
Hemopexin
PG_binding_1
Reprolysin_5
Reprolysin_4
Reprolysin_3
DUF4953
Motif
Other DBs
NCBI-GeneID:
124035551
NCBI-ProteinID:
XP_046204976
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All DBs
Position
LG05:complement(13778081..13809791)
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AA seq
659 aa
AA seq
DB search
MGCQTAFSPRHLVLKVFLVQLIAFLQKTSAAPSPIIKFPGDDSPKTDKEVALHYLNKFYG
CPQDRCNLMVLKDTLKKMQKFFSLQETGEIDPKTVEIMKKPRCGVPDVAQYNFFHRKPKW
QQNAITYRILGHSPDLDEETIDDAFLRAFKVWSDVTPLKFTRLMDGEADIMINFGRNEHG
DGYPFDGKDGLLAHAFAPGPGTGGDSHFDDDEQWTLGEGQVVKVKFGNAEGEFCKFPFMF
MGKEYNSCTNQGRDDGFLWCSTTYNFDDDGKYGFCPHELLFTLGGNADGAPCKFPFTFQG
ENYDGCTTQGRDDGYRWCATTENYDNDKSYGFCPETAMSTVGGNSEGSPCVFPFTFLGDT
YDSCTTSGRSDGKMWCASTKSYDDDRKWGFCPDQGYSLFLVAAHEFGHALGLEHSQDPGA
LMAPMYTFTKNFRLSNDDIKGIQELYGTGTDKPVPPTQGPVTPMDICNEPVVFDAVAQIR
GETFFFKDRFIFRSTNFRGKPSGPMLVATYWPELPVTIDAAYENPLEEKTVFFAGNEMWI
FNADQIEKGYPKRISSIGLPTDLKGIDAAFSFGKSQKTYLFAGDQFWRYNEAKKKMDPGF
PKLIADSWNGIPDGIDSAFSLNGIDYTYFFKGAHYFKMDDSSLKIVKLGEITKDWLGCH
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggggtgccagacggcatttagcccccgacaccttgtcctcaaagtgtttttggtacag
ttaatcgcctttctccagaaaacctctgcagccccctcgcccattatcaagttcccagga
gacgatagtccaaaaacagacaaagaagtggctctgcactatctgaacaagttctatggc
tgcccacaagacagatgtaatctcatggtgctgaaagacaccctgaagaagatgcagaag
ttcttctctctgcaagagacgggcgagatcgaccccaagacagtggagatcatgaagaag
ccccgctgtggagttcctgatgttgcccaatacaacttcttccacaggaaacccaagtgg
cagcaaaacgccatcacctacaggattctaggccactctcctgacctggacgaggagact
attgatgacgccttcttaagggccttcaaagtctggagtgacgtcaccccactcaagttc
acccgcctcatggatggagaggctgacatcatgattaactttggccgcaacgagcatggt
gatggctaccccttcgatggtaaagatggtcttctggctcatgccttcgctcctggacca
ggcaccggaggagactcccactttgatgacgacgagcagtggaccctgggagaaggacaa
gttgtgaaggtgaagtttggtaatgcagagggggagttctgtaagttccccttcatgttt
atggggaaggagtacaacagctgtaccaatcagggccgtgatgatggattcctctggtgc
tccaccacatacaactttgacgacgacggcaaatatggtttctgtccccatgagttgctg
ttcaccctgggtggaaacgcggacggagctccctgtaagttccccttcacgttccaaggg
gagaactatgatggttgcaccactcaggggcgtgacgacggctaccgctggtgtgctacg
actgagaactatgacaatgacaagtcctacgggttctgccctgaaacagccatgtccacc
gttggaggaaactctgagggttccccctgtgtgttccccttcacgttccttggagacact
tatgacagttgcaccacctctggacgtagcgacggtaagatgtggtgcgcctccaccaag
agctacgacgacgaccgcaagtggggcttctgtcctgatcaaggctacagtctgttcctg
gttgcggcccatgagtttggccacgccctgggcttggaacactcccaggaccctggtgct
ctgatggcccccatgtacaccttcaccaagaactttagactgtccaacgacgacatcaag
ggaatccaggagctctatggtactggtacagacaagcccgtgcctcccacccagggccca
gtcactcctatggacatctgtaatgaacctgtggtgtttgatgctgtggcccagatcaga
ggagagaccttcttcttcaaggacaggttcatattcaggtcaaccaacttccggggcaag
ccttcaggtcccatgctggtagccacctactggcctgagctcccggtcaccatcgacgct
gcctatgagaacccactggaggagaagactgtgttctttgcaggcaatgagatgtggatc
ttcaatgcagaccagatagagaaaggctaccccaagagaatctcctctataggcctgccc
acagacctgaaaggcattgacgcagccttctcctttggaaagagccagaagacctacctg
ttcgctggagaccagttctggaggtacaatgaagccaagaaaaagatggaccctggcttc
cccaagctcatcgctgactcctggaacggaatcccagacggcattgactctgcctttagt
ctgaatggcatcgattacacctacttcttcaaaggtgcccactacttcaaaatggatgac
agtagcctgaagatcgtcaaactgggcgagatcacaaaggactggctgggttgtcactaa
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