Oncorhynchus gorbuscha (pink salmon): 124038110
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Entry
124038110 CDS
T07892
Name
(RefSeq) proto-oncogene tyrosine-protein kinase receptor Ret-like isoform X1
KO
K05126
proto-oncogene tyrosine-protein kinase Ret [EC:
2.7.10.1
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04010
MAPK signaling pathway
ogo04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
124038110
04020 Calcium signaling pathway
124038110
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ogo01001
]
124038110
Enzymes [BR:
ogo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
124038110
Protein kinases [BR:
ogo01001
]
Receptor tyrosine kinases (RTK)
RET family
124038110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
RET_CLD3
Pkinase
RET_CLD4
RET_CLD1
Cadherin
Pkinase_fungal
RIO1
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
124038110
NCBI-ProteinID:
XP_046209536
LinkDB
All DBs
Position
LG06:complement(55449407..55489856)
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AA seq
1114 aa
AA seq
DB search
MGPTCGFSLGNIVLVFLLLCEGSVGLYFPQNQYKETVYVGQYAGTPVLQVHAMVESDSQQ
PHFYLWWNTPLKPPTYAPWFHLDETTGILSMNKTLEWSDFDSRYKLWILPLTVKAATRPV
KSFLHGLPTVRVILTFINDTVPPCGQTRPELENLCFPDKDLNSHIKENRFPGAIRQLRQL
TRLNVCPNYTISYSVESDVPAPFAINDNTTELIVTAPLDREERETYSPVLVCTVQTDTMI
DKFFVTLHINIYDEDDNAPYVNETDTEDVVLEFDRMEGSSFGNLFVYDRDTTPRYPKNQS
QNRFVGYMMTNDSWINEMFTIEHSFKEEKAIFGNVRGTVHEFWLALKKHLSVTENRTLQL
DYLVNDTTYPGPEGTVMLHYNITILPVPIRFTNVTYLFTTTRRANVFAQVGRICVDNCLK
FRGINVIYRLAVTDKTDKNVSGDIQSCFTAISIAQSLKDMAGVLYVNDTEALRRSECQDL
QYVVIAQEQQNQLQASTQILIVLDSNIDKQDTENHWFLSCAEGRQRGDCENIRGLGATTG
RCQWRQGSEKGISESYSTCSPDLRTCPDGFCDAVESKDASICPQDCTIEPIIGGHEKGIM
SGIRAGYGTCYCYSEKCFCEKDDIEEAMCDDVCKTIIATAVLLSFIVSILLSSYFIHRYH
KNSPKPPIASAEMTFRRPAQSYPISYSANNVRRGSLDSMENQVAIDTFKIPEDPKWEFPR
KNLVLGKTLGEGEFGKVVKATAFRLKGKAGYTTVAVKMLKDHASHSELRDLLSEFTLLKQ
VNHPHVIKMFGACSQDGPMYLIVEYAKFGSLRNFLRESRKVGPSYMSGNDANRNSSYLEN
PDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVY
EEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERL
FNLLKTGYRMEKPENCTEEMYNLMLRCWKQESDKRPIFADISKELEKMMVKNRDYLDLAA
STPADALLYDDALSEEDTPLVDCNNAPLPRTIPSTWIENKLYGMSYPNWPEKSPVLLNRL
DATNPVFTRYANDSVYANWMALPSPAKIVDNLDS
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atggggccaacgtgtggtttctctctgggaaacatcgttctggtcttcctgctgttgtgt
gaagggtcagttgggctctacttcccccagaatcagtacaaggagactgtgtatgttggg
cagtatgcaggcacacccgtgctccaggttcacgccatggtggagagcgactctcaacaa
ccccacttctacctgtggtggaacacccccctgaagcctccaacctatgccccgtggttc
cacctggatgagaccacagggatactctccatgaataagaccctggagtggagtgacttt
gactctcgatataagctttggatactgccgctgactgtcaaggcggcgaccagacccgtc
aagagtttcctccatggcctccctaccgtacgggtcatcctgaccttcatcaacgacaca
gtgccaccgtgtggccagaccagaccagagctggagaatctgtgtttccctgacaaggac
ctgaactcccacattaaagagaacaggttccccggggccatccgccagctcagacagctc
accaggttaaatgtctgccccaactacaccatctcctacagtgtggaatcagatgttcca
gccccatttgctataaatgacaacaccactgagttgatagtgaccgctcctttggaccgc
gaggagagagagacgtacagtcccgtgctggtctgcacagtgcagactgacacaatgata
gacaagttctttgttacactacatatcaacatctacgacgaagacgacaatgcaccttat
gtcaatgaaacagacacagaggatgtggtgcttgagtttgatcgcatggagggaagttct
tttggcaatttatttgtctatgatagagacacaacacccaggtatcccaaaaaccagagt
cagaacagatttgtcggatatatgatgaccaatgactcatggataaatgaaatgttcacc
atagaacactctttcaaagaagagaaggccatttttggcaacgtccgaggcactgttcat
gagttctggcttgcactaaagaagcatttgtctgtaaccgagaataggaccctccagctg
gattacctggtcaatgacaccacttaccccggtccagagggaactgtgatgctgcactac
aatatcaccatcttacctgtccccatccgcttcaccaatgtgacatatctcttcaccaca
acacgtagagctaacgtctttgcccaggttggtagaatctgtgtggacaactgcctgaag
ttccggggcatcaatgtcatataccggctagcggtaacagacaagacagacaaaaatgtg
tctggcgacatacagtcatgcttcacggcgattagcatcgcacagagcctcaaggacatg
gcgggggtgctgtatgtgaacgacacagaggctctccgcaggtcagagtgtcaggacctg
cagtacgtggtcattgctcaagagcagcagaatcagctgcaggctagcactcagatcctc
attgtgctcgatagcaatattgataaacaggatacagagaaccattggttcctctcctgt
gcagaggggcgacagcgtggggactgtgagaacatcagaggcctaggggctaccacaggg
aggtgccaatggagacagggctctgaaaaaggaatatcagaaagctattccacatgctcc
cctgacctccgcacgtgccctgatggcttttgtgatgcagtcgaaagcaaagacgcgtca
atatgtcctcaggattgcacaattgaacccattatcggaggtcatgagaagggcatcatg
tctggcattagagctggctatggaacctgctactgctactctgaaaaatgcttctgtgag
aaggatgatatagaggaggccatgtgtgacgacgtctgcaaaaccatcattgccaccgcg
gtgctgctctccttcattgtctccatcctcctgtcctcctacttcatccatcgctaccac
aagaactcccccaagccccccatcgcctcggctgaaatgaccttccggcggcccgcacag
tcctaccccatcagctactctgctaacaatgtgcgccgtggctcgttggactctatggag
aaccaagtggccattgacaccttcaaaatacctgaggatcccaaatgggaatttccacgc
aaaaatctggtgcttggtaaaaccttaggagaaggggaatttgggaaggttgtcaaggcg
actgcattccggctgaaaggaaaggctggctacaccacagtagctgtgaaaatgcttaaa
gaccatgcctcacatagtgaactgcgtgacctcctgtccgaattcaccttactgaagcaa
gtcaaccatccacacgtcatcaagatgttcggagcttgcagccaggatggtccaatgtac
ctgattgtagaatatgccaaatttgggtcactgcgcaacttcctgcgtgagagccgaaag
gtaggacccagctacatgtcgggcaacgatgccaaccgcaactcgagctacctggagaac
ccagatgagagggcactcaccatgggcgacctgatttccttcgcctggcagatctccagg
ggtatgcagtacctggctgaaatgaagcttgttcacagggacctcgctgcaagaaatgtc
ctagttgcagaggggcgtaagatgaagatttcagactttggtttgtcccgggacgtgtat
gaggaagactcttatgtgaagaggagcaagggtcgaatcccagtgaaatggatggcaata
gagtccttgtttgatcacatttacacaacacaaagtgacgtctggtcctttggtgtgctg
ttgtgggagattgtgacactgggcggaaacccgtacccaggcatcgcccctgaacgcctc
tttaacctcctcaagactggctacagaatggagaaaccagagaactgcacggaagaaatg
tataatctaatgcttcgatgctggaaacaggagtcagacaaaaggcccatattcgcagac
atcagtaaagaactggagaagatgatggtgaaaaaccgggattacctggacctggcggca
tccacgccagccgacgccctgctgtacgacgacgccctctccgaagaggacacaccccta
gtggattgtaataacgcccctctcccacgaaccattccctccacatggattgaaaacaag
ctttatggcatgtcatacccgaactggcctgagaagagcccggtactgctcaacagactt
gatgccactaacccagtctttacaagatatgccaatgatagtgtttatgcaaactggatg
gctttgccttcacccgcaaaaattgtggacaaccttgatagttaa
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