Oncorhynchus gorbuscha (pink salmon): 124039016
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Entry
124039016 CDS
T07892
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C-like
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04020
Calcium signaling pathway
ogo04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
124039016
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
124039016
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ogo04040
]
124039016
Ion channels [BR:
ogo04040
]
Ligand-gated channels
Glutamate (ionotropic)
124039016
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GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
NMDAR2_C
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
124039016
NCBI-ProteinID:
XP_046210861
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All DBs
Position
LG07:56068543..56124491
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AA seq
1265 aa
AA seq
DB search
MGASLEQQIVCMFKLMEEYDWGDFVVITSMWPGYETFVDYVRSYTDTSYFLWRLQDILSL
EMSVGTSDVRAKRMLQQIDSQVLLAYCSYEEAQYLFQVAGEVGLLGPGYIWILPSLALGN
TESPPPISFPVGLIGVITDHWRKSLRQRVREGVAIVAKGADSFRRHQGFLPEGHSDCNTP
VTHINNNTLFRHMLNVTWERKDLSFNSDGYLTNPSMAIIALDRDRLWDKVGTLERGILQV
RYPVWPRYGSFLETVSDDRHLTVATLEERPFVIVENVDPDTGTCVRNTVPCRRQSNRTES
IVGHSEPYNKLCCKGFCIDILKKLSRTIKFSYDLYLVTNGKHGKMISGIWNGMIGEVFYR
KADMAIGSLTINEERSEIIDFSVPFVETGISVMVARSNGTVSPSAFLEPYSPAVWVMMFV
MCLTVVAVTVFVFEYFSPVGYNRSLVSAKAPGGPTFTIGKSVWLLWGIVFNNSVPIENPK
GTTSKIMVLVWAFFAVIFLASYTANLAAFMIQEQYIDTVSGLSDKKFQKPQEHYPPFRFG
TVPNGSTERNIRSNYPDMHAHMVKYNQKGVEDALNSLKTGKLDAFIYDAAVLNYMAGKDE
GCKLVTIGSGKVFATTGYGIALQKDSRWKRPIDLALLQFLGDGDTQRLETVWLSGICQNE
KNEVMSSKLDIDNMAGVFYMLLVAMGLSLLVFAWEHLLYWKLRKKLDKSPRMDFLLAISR
GIYSCFNGVEESDHPNLANSDLTTNYAQANMLKMLRTAKDLVNSAQVETSLDHATKTIEH
WGRHGGNLPVHIPQQVTTEMVPGGFSHVTDNTHTHLSPEHPLIPQYCTLGVVTSLNRQKG
LARPTPLRYTLPARTSSLYDRPLSVSSLSSPHLDLAGGDPLSSYSQPSTGRLYVEPQHIS
HPRSPFIPYSELQLPDIYPFSHHPSAISHPSHTEPSRKNRRSKSLLSRESGGGEWRRRRE
EKTVCLGELRANHLQENNVSPQMPDSLYPGTMLCPGVEGCVGSWPLPLEELVLAGRPRLH
RRPSFLRATWGSERILQPDETLPTSLDCQSHSALPDLFPCVMADQETPTKLYNPAPLRNN
LCYPATSTRQHAYLHIRQDQRKGNGRKKLRYSNSTHLPTYREAMLGGQGGGGGVGLGGVR
RATNLLSRQYSHYLTSYPGLPLYHGPLDLQAHSQASSNHASPSPGTYPSPSPVCQLLPCG
GFRGQRGLLYQDSLYGAYGANGAYREDQDPGLEPQRGDTSVGLRSEDRSCVTQPWGRVSS
LESEV
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcctccctggagcagcagatcgtctgcatgttcaagttgatggaggagtatgac
tggggagactttgtagtaatcaccagcatgtggccgggatacgagacgtttgtagactac
gtccgatcctacacggacacttcctacttcctgtggaggctacaagatatcctgtctctg
gagatgtctgtcggaaccagtgacgtccgagccaaacgcatgttacagcagattgattcc
caggtgctcctggcctactgttcctatgaagaggcccagtacctgttccaggtagcaggg
gaggtgggtctactggggcctgggtacatctggatcctcccctccctcgcattgggcaac
acagagagccctccacctatcagcttccctgtaggactgattggcgtcatcactgaccac
tggaggaagagcctgaggcaacgtgtcagagagggagtggccatagtggccaaaggggcg
gatagtttcagaaggcatcaagggttccttccagagggacacagcgactgcaacacacca
gttacacatatcaacaacaacacactgttcagacacatgctaaatgtgacatgggagcgt
aaggacctgtcgttcaacagtgatggctacctgaccaacccctccatggccatcatcgca
ctggacagagacagactgtgggacaaggtgggaacattagagcggggtatcctccaggtg
cgttacccggtgtggcctcgctatggaagttttctggagacggtatcagatgaccgccac
ctgacggtagccactctggaggagaggcccttcgtcatcgtagaaaacgtggaccccgac
acgggcacctgtgtacgcaacaccgtgccttgccgacgccagtccaaccgcaccgagagt
attgtgggccactctgagccctacaacaagctgtgctgtaaggggttctgtatagacatt
ctgaagaagctgtctcgcaccattaagttctcctacgacctctacctggtcactaacggg
aaacatggaaagatgatcagtggcatctggaacggcatgatcggagaggtgttctatagg
aaagcagacatggccataggttctctcaccataaatgaggagcgttctgagatcatcgac
ttctccgtgcccttcgttgagacgggcatcagcgtcatggttgcccgtagcaatgggact
gtctccccctccgccttccttgagccctatagcccagcggtgtgggtgatgatgtttgta
atgtgcctgaccgtggtcgctgtgactgtattcgtgtttgagtacttcagtcctgtcggg
tacaaccgaagcttggtcagtgccaaagcgcccggaggtcctaccttcaccatagggaag
tcagtgtggctactgtggggcatcgtgttcaataactcagtccccattgagaaccctaaa
ggcacaaccagtaagatcatggtgttggtgtgggccttcttcgctgtcatcttcctggcc
tcctacactgccaacctggctgccttcatgatccaggagcagtacatagacactgtgtct
ggactgtctgacaagaagttccagaagcctcaggagcactaccctccattccgttttggt
acggtccctaacggcagtacagagaggaacatcaggagtaactaccctgacatgcatgca
cacatggtcaaatacaaccagaaaggagtggaggatgccctcaacagcctcaagacaggg
aagctggacgcattcatctatgatgctgcggtgttgaactacatggcagggaaggatgag
ggatgtaagcttgtgactatcggctctgggaaagtgtttgccacgacaggctatggtata
gccctgcagaaagattccagatggaaacggcccattgacctggccttgctgcagttcctg
ggagacggtgacacccagcgcttggagacggtctggctgtcaggcatctgtcagaatgag
aagaacgaggtgatgagtagtaagctggacatagataacatggccggggtcttctacatg
ctactggtggccatggggctcagtctcttggtgtttgcctgggaacatctactctactgg
aaactacgcaagaaactagacaagtctcctcgcatggacttcctgctcgctatcagcagg
ggaatctacagttgcttcaacggggtggaggaatcagaccaccctaacctggcaaactca
gatctgacaactaactacgcccaggctaacatgcttaagatgttacgcaccgctaaagac
ctggtcaactctgcccaggtcgagacctcactggaccatgccaccaagaccatagaacac
tggggtcgccatggcggcaacctgccagtccacattccgcagcaggtcaccacggaaatg
gttccaggagggttttctcatgtcacagataacacacacacacacctgtcacccgagcac
cccctcatcccgcaatactgcacgctgggtgtagtgacttctctgaacaggcagaagggg
ctggcaagacccacgcccctacgatacacgctcccggctcgcacttcctccctctacgac
agaccactttctgtttctagtctcagtagccctcaccttgacctggctggaggggacccc
ctctcttcctactctcaaccctccacaggtaggctgtatgtggagccccagcacatctcc
cacccccgctctcctttcatcccctatagtgagcttcagctgccagacatctaccccttc
tctcaccacccctctgccatctcccatccatcccacacagaaccctccaggaagaatagg
aggagcaagagcctcctctcaagggaatcaggaggaggagagtggaggaggcgtagggag
gagaagacggtgtgtctgggtgaactccgggccaaccacctccaggagaacaacgtctcg
ccccagatgcccgactccctgtacccaggaacaatgctctgtcctggggtagaaggctgc
gttggctcctggcctcttcccctggaggagctggttctggcaggcagaccgaggctccac
cgacggccatctttcctccgagcaacctgggggagtgagcggattctccagccggacgaa
actctgcctacatcccttgattgccaatcacattctgctttaccagacctgttcccctgc
gtcatggccgaccaagaaactcccactaaactctacaaccccgcccccctccggaacaac
ctatgctaccctgccacctcaactcgccagcatgcgtatctccatataaggcaggaccag
aggaaagggaatggacgtaagaagctgcggtactcaaactccacccacctgcccacctac
agggaggccatgctggggggtcaaggaggcggagggggggtaggccttgggggggtccgg
agagccaccaacctgctcagcagacagtactcccactatctaacctcctaccctgggctg
cctctctaccatggtcccctggaccttcaggctcattcccaggcatccagcaaccacgcc
agccccagccccggtacataccctagtcccagtccagtatgccagctcctgccctgtggt
ggctttcgaggccagagggggttgctgtaccaggacagtctgtatggagcctatggggcc
aatggagcctaccgagaggaccaggatccgggcttagagccccagagaggagatacatca
gtaggtttgaggtctgaggacagatcctgtgtgacccagccctggggacgcgtgtctagt
ctggagtcagaggtctga
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