Oncorhynchus gorbuscha (pink salmon): 124040233
Help
Entry
124040233 CDS
T07892
Name
(RefSeq) histone-lysine N-methyltransferase PRDM9-like isoform X1
KO
K20796
[histone H3]-lysine4 N-trimethyltransferase PRDM7/9 [EC:
2.1.1.354
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo00310
Lysine degradation
ogo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
124040233
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
124040233
03036 Chromosome and associated proteins [BR:
ogo03036
]
124040233
Enzymes [BR:
ogo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
124040233
Transcription factors [BR:
ogo03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
124040233
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
124040233
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
124040233
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
PRDM2_PR
zf-H2C2_2
SET
zf-C2H2_6
zf-H2C2_5
zf_C2H2_ZHX
zf-C2H2_jaz
zf-met
Motif
Other DBs
NCBI-GeneID:
124040233
NCBI-ProteinID:
XP_046213164
LinkDB
All DBs
Position
LG07:66055839..66060717
Genome browser
AA seq
953 aa
AA seq
DB search
MESIVMSEEVIVVEWADPGVSEEGCQVQIITDNPSAVFSDSLVQNILVNTVVQGQEEGHQ
LLDDNGNDLYCEECHTSNKDQCDVQGGLSFMLDSPTPMGIPQRALLTLPHGLVVGRSSIP
GAGLGVLNQGPAVAPGMHFGPCEGEVTTRERAVASDYSWEVWNSKSESEYIDAARDTHSN
WMRYVNCARNEEEGNLIALQYRGIVFFHCCRSILPGDEFLFWPGGRFIERFRDPSDQIWL
RKCTPSEFRTDLSSQVFLCCQCQLTFTTKSYLQKHTEKSHSLDLSPASELSELDNHLSNG
NVKPDPMSSSSVVELAYRCPQCPKSFKQKGHVQRHMRNVHSKVKPYCCIHCRRCFAQLSC
LARHQIRVHGKKKKQGIEEFMSEEVRGKSQPPTDRTQEIESSTSDAPPTGTSVLFPCPHC
PFSSTVESSLCQHMKSHDQREKVIKMQAFVEVRGESTHKPESPELPSDALHTEPQTDEPA
QRGGEANSCSQCGKRFKQKGHFQRHMRAVHSNVRPYCCPQCRKCFAQGYDLARHQLRVHG
TKKKHRVVEVRGENLPRPPSDSAWEPEPPSNDSPTETQTGRAPSQRLRNLRVKSTRTSKA
KTKTNAPKQRQISTKKRTHSDPDSDDLDMEKEGEAVGEEAQYSCTECQGTYDNPESLRSH
QCIQVVVGPPPYSCSTCGVTFKRYTTLKKHKLNKHPKENMRYCCTRCGRFFSQAAGLQRH
LEAEVCKDIQLSSEAVPCSYCQFSFTEERYLRKHVKRHHPEEYVSQASGLGSGLIPPEQK
AVEGGEVHLCFQCGKSYKYVKCFKSHRCFQSVTAKRYLCNDCGKGFSCFYSLKQHQRIHT
GEKPYRCSYCEKCFSHSGQLNVHVRIHTGEKPFLCTECGETFRQSGDLKRHERKHTGVKP
CTCPECGKSFSRPQSLKAHQLLHNGEKLYKCDQCVKRFSRNYHLTRHHEKMHS
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atggagtctatagtgatgtctgaagaagtgatcgtcgtggagtgggcagatcctggtgtg
tcagaggagggatgccaagtccaaatcattacagacaacccctctgcagtgttctctgac
agcctggtccagaatatattggtgaacactgtggtgcaaggccaagaggagggtcatcaa
ctactagatgacaacggtaatgacctctattgtgaggagtgtcatacctccaacaaagac
cagtgtgatgtccaaggtggtctgtccttcatgctggactctcccactccaatgggtata
ccccagagggccctcctcaccctaccccatgggctggtggtaggcaggtccagtatccca
ggggcaggcctgggggtcctaaaccaagggccagctgtggccccaggaatgcactttggc
ccctgtgagggggaggtgactaccagggaaagagcagtagcaagtgactattcctgggag
gtctggaacagtaagagtgaatctgagtacatcgatgctgcacgagacactcattccaac
tggatgaggtatgttaactgtgctcgtaatgaagaggagggtaatctcatagcactccag
tacagggggattgttttcttccactgctgccgctccatcctcccaggagatgagttcctg
ttttggcctgggggcagattcatcgaaaggtttagggacccctctgaccaaatctggctc
cgaaagtgcaccccttcagagtttagaacagatttgtcgtctcaggttttcctctgctgt
cagtgccagcttactttcaccaccaagtcctaccttcaaaaacatacagagaaatcacac
tctctggacctatcacctgcgtctgaactgagtgagcttgacaatcacctttctaacggc
aatgtaaagccagacccgatgtcgtcgtcctctgtagtggagttggcctaccggtgccct
cagtgtcctaagagctttaagcagaagggccacgtccagagacacatgcgaaatgtccac
tccaaggtgaaaccgtactgctgcatccattgtaggaggtgtttcgctcagctgtcttgt
ctggccaggcaccagatacgagttcatggaaagaagaagaagcagggaatagaagagttt
atgtctgaagaggtcagagggaagagtcagccacccactgacaggacccaggaaatagag
tcctccacctccgatgctccacctacagggacctcggtcttattcccgtgtcctcattgc
ccattctcttctactgtggagagcagcctttgtcagcacatgaagagccatgaccaaagg
gaaaaggtcatcaaaatgcaggcttttgtagaggtcagaggggagagcacccataaacct
gaatcccctgaactcccctctgatgctctacatacagagcctcagacagatgagccggca
caaagaggtggggaggccaacagctgctctcagtgtgggaagcgctttaaacagaagggt
cacttccaaagacacatgcgagctgtccactccaacgtcagaccctactgctgcccccag
tgcaggaagtgttttgctcaggggtatgacctggcgaggcaccagctaagagttcacgga
acgaagaagaagcatcgagtagtagaggtcagaggggagaatctgccccggccgccctct
gacagcgcctgggaaccggagcccccctccaatgattcacctacagagacccagactgga
agagctccctctcagagactaagaaacctcagagtaaagtccactaggacctctaaagcc
aaaactaagacaaacgcaccaaaacaaagacaaatcagtaccaagaagagaacccattca
gatcctgattcagatgatctggacatggagaaggagggagaggctgttggagaggaggcc
cagtacagctgcactgagtgtcagggaacctacgacaacccagagtctctcagatcccat
cagtgcatccaagtcgtggtggggccgccgccgtattcttgctctacatgtggggttacc
ttcaaacggtacaccactctgaagaagcacaagctcaacaagcacccgaaggaaaatatg
cgttattgctgcacccgctgtggaaggttcttcagtcaggctgccggtctacagcgccac
ctggaggcagaagtatgtaaggacatccagctgagctctgaagctgtcccctgctcctac
tgccaattctccttcaccgaggagaggtacctccggaagcacgttaagagacaccaccct
gaggagtatgtctctcaagcctcaggcctgggctcaggcctcattccgccagagcagaag
gccgtggaggggggagaggtccacctctgctttcagtgtgggaagagctacaagtatgtt
aaatgcttcaaatctcacaggtgtttccagtcagtcacagccaaacggtacttgtgcaat
gactgtgggaaaggtttctcttgtttctacagccttaagcagcatcagcggattcacacg
ggagagaagccataccgctgttcttattgcgagaagtgttttagccactctggacagctg
aatgtgcacgtgaggatacacacaggggagaagcctttcctgtgtacagagtgtggagag
accttccgtcagtctggggatctgaagcgccatgagagaaaacacactggggtgaaacca
tgtacctgtcctgaatgtgggaaaagcttcagtagacctcagagtctgaaagctcaccag
ctgctgcacaacggagagaaactgtacaagtgtgatcagtgtgtcaaaaggttttcacga
aattatcacctgacgagacaccatgaaaagatgcactcataa
DBGET
integrated database retrieval system
