Oncorhynchus gorbuscha (pink salmon): 124041437
Help
Entry
124041437 CDS
T07892
Name
(RefSeq) sphingosine-1-phosphate lyase 1-like isoform X1
KO
K01634
sphinganine-1-phosphate aldolase [EC:
4.1.2.27
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo00600
Sphingolipid metabolism
ogo01100
Metabolic pathways
Module
ogo_M00100
Sphingosine degradation
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
124041437
Enzymes [BR:
ogo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.27 sphinganine-1-phosphate aldolase
124041437
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Aminotran_1_2
DegT_DnrJ_EryC1
SepSecS
BLH_phosphatase
Motif
Other DBs
NCBI-GeneID:
124041437
NCBI-ProteinID:
XP_046214970
LinkDB
All DBs
Position
LG08:27787696..27832175
Genome browser
AA seq
570 aa
AA seq
DB search
MDYWSALEVYKEMLLLYLEEGKRLVNTNCEELEPWQIIGATLVSTLGAVWVKGFLFQQET
LTSRLKKQCFRLIRKIPFVGATIQNQLKKALADMSLSLCTLKEGMSYTKQLPEQGLSQVQ
VLDRIREYQTLNEVDWEKGRVSGAVYWGDQTLTKLLVKVYGDFAWSNPLHPDLFPGVRKM
EAEIVRMACTLFNGGPNSCGTVTSGGTESILMACKAYRDMAYERGVKHPEIVAPVSVHAA
FDKAANYFGMKLVHIPLDKKTLKVDVKAMRRAINKNTAMLVCSAPQFPHGIIDPIEEVGK
LAVKYNLPLHVDACLGGFLIVFMAKANYPLAPFDFRVKGVTSISADTHKYGFAPKGSSVI
LYSDKQYRHYQYFVAPDWQGGIYASPSVAGSRPGGIIAACWATMMYMGEDGYIKTTKKII
DTARTIKTEIRKMNGVFVFGDPEVSVVAIGSDVFDIFRLSNALTSKGWNLNTLQYPSSIH
ICCTVLHTQEGVAEQFISEVKEQVALILKNPNEKTTGMGAIYGMAQSIPDRSMVTEISCG
FLDCLYSTEEPRSSQPQKTHINGNSNGKAH
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggactattggagtgccttggaggtgtacaaggagatgctactgctctacctggaggaa
ggcaagcggcttgtgaacaccaactgcgaggagctggaaccctggcagatcattggagct
actcttgtatctaccctaggagcagtctgggtcaaaggcttcttgtttcagcaagaaacc
ctgacatcccgactcaagaagcagtgctttcgactcatcagaaaaataccctttgttggc
gcgacaatccagaaccagctgaaaaaggccctggctgacatgtctctcagtctttgcaca
ctgaaggagggcatgagctacactaaacagctgcctgaacaagggcttagccaagttcaa
gttctagaccggatcagagagtatcaaacactgaatgaagtggattgggagaaaggacga
gtttcaggcgcagtatactggggagatcagacacttaccaaacttttggtgaaggtatat
ggagactttgcatggagcaacccacttcacccagacctctttcccggtgtgaggaagatg
gaggcagagattgtgagaatggcgtgtaccctcttcaacggtgggcccaactcttgtggc
acagtcacctccggaggaactgaaagcatattgatggcatgcaaggcgtacagagacatg
gcctatgagcggggtgtgaaacatcctgaaattgtcgcaccagtcagtgttcatgcagcc
tttgacaaagcagcaaactactttggaatgaagcttgttcacatccccctggacaagaag
accttgaaagtggatgttaaggcgatgaggcgagccatcaacaagaacacagccatgctg
gtatgctccgcaccccagttcccccatggaatcattgatcctattgaggaagtaggaaag
ctggctgtaaagtacaacctccctctgcatgtggatgcttgtttgggagggtttctaata
gttttcatggccaaagccaattacccactggctccctttgacttcagggtaaagggtgtg
accagcatctctgcagacacacacaagtatggctttgcccccaaaggttcatcagtgatc
ctgtatagtgacaaacagtacaggcattaccagtactttgtggctccagactggcagggg
ggcatctatgcatccccatcagtggcaggttctcggccaggcggtatcatcgcagcgtgc
tgggccaccatgatgtacatgggagaggatggctacataaagactactaagaagatcatt
gacactgcacgaactatcaagacagaaatccgtaagatgaatggagtgtttgtgtttgga
gatcctgaagtgtccgtggtggcaataggctctgacgtcttcgacattttccgtttatcc
aatgcactgacgtcaaagggttggaatctcaacacgctacagtatccatccagcatccat
atctgttgtacagtgctgcacacacaggaaggtgtggccgaacagttcatcagtgaggtc
aaagagcaggtggctctcattttgaagaaccccaatgagaagaccactggaatgggagcg
atctatggcatggcccagtccatccctgacagatccatggtgacagagatctcctgcggt
ttcctggactgcctctacagcacagaggagccaaggtcctctcagccccagaagacccat
ataaatggcaacagcaacggcaaggcccactga
DBGET
integrated database retrieval system
