Oncorhynchus gorbuscha (pink salmon): 124041440
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Entry
124041440 CDS
T07892
Symbol
ret
Name
(RefSeq) proto-oncogene tyrosine-protein kinase receptor Ret isoform X1
KO
K05126
proto-oncogene tyrosine-protein kinase Ret [EC:
2.7.10.1
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04010
MAPK signaling pathway
ogo04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
124041440 (ret)
04020 Calcium signaling pathway
124041440 (ret)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ogo01001
]
124041440 (ret)
Enzymes [BR:
ogo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
124041440 (ret)
Protein kinases [BR:
ogo01001
]
Receptor tyrosine kinases (RTK)
RET family
124041440 (ret)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
RET_CLD3
Pkinase
RET_CLD4
RET_CLD1
Cadherin
Pkinase_fungal
RIO1
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
124041440
NCBI-ProteinID:
XP_046214973
LinkDB
All DBs
Position
LG08:27893423..27924754
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AA seq
1112 aa
AA seq
DB search
MGQTCGFSLGNIVLVLLLLCEGSVGLYFPQNQYKETVYVGQSAGTPVLQVHAMVESDSQR
PHFYLCYLRPPTYAPWFHLDETTGILSMNKTLEWSDFDSAYKFWKLPLSVIAATRPLKKF
LCGLGHPTVQVSLTFINDTAPPCGQTRPELKKLCFPDKDLSSHIKENRFPGALRQLRQLT
RLNVCPNYTISYSVESDVPAPFAVNENTTELVVTAPLDREESETYSPMLICTVQTDTMVD
TFFVTLHINVYDEDDNAPYVSGPDTEDVVLEFDRKQGSSFGNLVVYDRDTTPRYPKSQSQ
NRFVGNMMTNDSWINEMFTIEYSFKEEKAIFGNVRGTVHEFRLALKKNLSVTENRTFQLD
YLVNDTTYPGPEGTVMLHYNITILPVPILFTNVTYLFALTRRANVYSQVGRICVDNSLKF
QGINVTYRLVVAEKTGNVSDDVQSCYAAISIAQSLKDMVGLLYVNDTEALRRPECQDLQY
VVIAQEQQNLLQASTQILVVLDSDIDKQGLEDQQFLSCAKGRQRGDCVTIRGLGATTGRC
QWRQGSAKGISESYSTCSPDLRTCPDGFCDAVESKDASICPQDCTIEPVIGGHEKGIMSG
IRAGHGTCYCYSEKCFCEKDDIEEAMCDEVCKTIIATAVLLSFIVSILLSSYFIHRYHKN
SPKPPITSAEMTFRRPAQSYPISYSANNMRRGSLDSMENQVAIDTFKIPEDPKWEFPRKN
LVLGKTLGEGEFGKVVKATAFRLKGKAGYTTVAVKMLKDHASHSELRDLLSEFTLLKQVN
HPHVIKMYGACSQDGPMYLIVEYAKYGSLRNFLRESRKVGPSYMSGNDANRNSSYLENPD
ERALTMGDLISFTWQISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEE
DSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLFN
LLKTGYRMEKPENCTEEMYNLMLRCWKQESNKRPIFIDISKELEKMMVKNRDYLDLAAST
PADALLYDDALSEEDTPLVDSNNAPLPRTIPSTWIENKLYGMSYPNWPEKSPVLLNRLDA
TNPVFTRYANDSVYANWMALPSPAKIVDKIDS
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atggggcaaacgtgtggtttctctctgggaaacatcgttttggtcctcctgctgttgtgt
gaaggctcagttgggctctacttcccccagaatcagtacaaggagactgtgtacgtcggg
cagtctgcagggacacccgtgctccaggtccacgccatggtggagagcgactctcaacgg
ccccacttctacctgtgctacctgaggcctccaacctatgccccgtggttccacctggac
gagaccacagggatactctccatgaataagaccctggagtggagcgactttgactctgca
tataagttttggaagctgccgctgagtgtcattgctgcgaccagaccgttgaaaaagttc
ctctgtggcctcggccaccccaccgtacaagtcagcctgaccttcatcaatgacacggcg
ccaccgtgtggccagaccagaccagagctgaagaaactgtgcttccctgataaagacctg
agctcccacatcaaggagaacaggttccccggggccctccgccagctcagacagctcacc
aggcttaacgtctgccccaactacaccatctcctacagtgtagaatccgatgttccggcc
ccattcgctgtgaatgaaaacaccactgagttggtagtgactgctccgttggaccgggag
gagagcgagacatacagtcccatgctgatctgcacagtgcagactgacacaatggtggac
accttttttgttacactgcatatcaacgtctacgacgaggacgacaacgcgccgtatgtc
agtggaccagacacagaggacgtggtgctggaatttgatcgcaagcagggaagttctttt
ggcaacttggttgtctatgatagagacacaacacccaggtatcccaaatcccagagtcag
aatagattcgtcggaaatatgatgaccaatgactcatggataaatgaaatgttcaccata
gaatactctttcaaagaagagaaggccatttttggcaacgtccgaggcactgttcatgag
ttccggcttgcactgaagaagaatttgtctgtaacggagaataggaccttccagctggat
tacctggtcaatgacactacataccccggtccagagggaactgtgatgctgcactacaat
atcaccatcttacctgtccccattctcttcaccaatgtgacatacctcttcgcactaaca
cgtagagctaatgtctactcccaggtcggtaggatttgtgtggacaacagcctgaagttc
cagggcatcaatgtcacataccggctagtagtagcagagaagacagggaatgtgtccgac
gacgtacagtcatgctacgctgcgattagcattgcacagagcctcaaggacatggtgggg
ttgctatatgtaaacgacacagaggcgcttcgcaggccagagtgccaggacctgcagtat
gtggttattgctcaagagcaacagaatctgctgcaggctagcactcagatcctcgttgtg
ctcgatagcgatattgataagcagggcctagaggaccagcagttcctctcctgtgcaaag
ggaagacagcgtggggattgtgtgaccatcagaggcctgggggcaaccacagggaggtgc
caatggagacagggctctgcaaaaggaatatcagaaagttattccacctgctcccctgac
ctccgcacgtgccctgatggcttttgtgatgcagttgaaagcaaagacgcatcaatatgt
cctcaggattgtacaattgaacccgtcataggtggtcatgagaagggcatcatgtctggc
attagagctggccatggaacctgctactgctactctgaaaaatgcttctgtgagaaggat
gatatagaggaggccatgtgtgacgaggtctgcaagaccatcattgccactgccgtgctg
ctctccttcatcgtctccattctcctgtcctcctacttcatccatcgttaccacaagaac
tcccccaagccgcccatcacctcagctgagatgaccttccggcggcccgcacaatcctac
ccaatcagctactccgctaacaacatgcgccgtggctcgttggactccatggagaaccaa
gtagccattgacaccttcaaaatacctgaggatcccaaatgggaatttccacgcaaaaac
ctggtgctgggcaaaacgttaggagaaggggagtttgggaaggttgtcaaggcgactgca
ttccggctgaaaggaaaggctggttacaccacagtagctgtgaaaatgcttaaagaccac
gcctcacatagtgaactgcgggacctcctgtcagaattcaccttactgaagcaagtcaac
catccacacgtcatcaagatgtatggagcctgcagccaggatggtccaatgtatctgatt
gtagaatatgccaaatatgggtcactgcgcaacttcctgcgtgagagccgaaaggtggga
cccagctacatgtcaggcaacgatgccaaccgcaactcgagttacctggagaatccagat
gagagggcactcaccatgggcgacctgatctctttcacctggcagatctccaggggcatg
cagtacctggctgaaatgaagcttgttcacagggaccttgctgcaagaaatgtcctagtt
gcggagggccgtaaaatgaagatttctgactttggtttgtcccgggacgtgtatgaggaa
gactcatatgtgaagaggagcaagggtcgaatcccagtgaaatggatggcaatagaatcc
ttgtttgatcacatttacacaacacaaagtgacgtctggtcctttggtgtgctgttgtgg
gagattgtgacactgggtggaaacccgtacccaggcatcgcccctgaacgcctctttaac
ctcctcaagactggctacaggatggagaaaccagaaaactgtactgaggaaatgtataat
ctgatgcttcgatgctggaaacaggagtcaaacaaaaggcccatattcatagacatcagc
aaagagctggagaagatgatggtgaaaaaccgggattacctggacctggcagcgtctacg
ccagccgacgccctactgtacgacgacgccctctccgaagaggacacacccctagtggac
agcaataatgcccctctccctcgaaccattccctccacatggattgaaaacaagctctat
ggcatgtcatacccgaactggcctgagaagagccccgtactgctcaacagacttgatgcc
actaacccagtctttacaagatatgccaatgatagcgtttatgcaaactggatggctttg
ccttcacccgcaaaaattgtggacaagattgatagttaa
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