Oncorhynchus gorbuscha (pink salmon): 124041976
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Entry
124041976 CDS
T07892
Name
(RefSeq) nucleoprotein TPR-like isoform X1
KO
K09291
nucleoprotein TPR
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124041976
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogo03019
]
124041976
Messenger RNA biogenesis [BR:
ogo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124041976
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
GAS
ERM_helical
Fez1
Apo-CIII
Motif
Other DBs
NCBI-GeneID:
124041976
NCBI-ProteinID:
XP_046216159
LinkDB
All DBs
Position
LG08:complement(63812249..63835040)
Genome browser
AA seq
2550 aa
AA seq
DB search
MAAVLLQVLERTELNKLPKAAQNKLEKFLTDQKNEIESLKTQHERFKADCEQQYFDVEKR
LAESQEQIVSHTRNYQTLKEENTKLIEELNNLKGVDVESSEEKESQQPSKAKYEIEAERR
ELARLLEKRTQDVENLTEDVKRLNDKLVETNTAKIDLQLKLDEIQSSEVSIQHREKRMEQ
EKELLQNQNTWLNSELKTKTEELLSVSREKGKEILELKCSFECKKDEVTRLQTQVTNLKK
SSENLQKRVEDLMTKLKEAKDYHSTMEEKYRNEQNAHIKLSNLYKGSASDAESKNEELSR
AVEELHKLVKDAGDARQNMEKKLADMEGSKSKQEAELKEKFKKMELENANLRASDKKRSM
PVLTEEELDSMCPTAAAVAKIVKPGMKFMELYNAFVDIQDQLLVEKQENRRVTRVLDEIV
QEVEEKAPILKRQREEYESMQRSMNSLCAKLEQARTEIHSLQKETDEAKKHCSNLEKDNQ
HSERELEDMSQQVRVLLVELEEARGNPVVREETMNMSSSSEIINPRQVSFRSVEELQRQN
QSMLARLRELGEKMEREQTEANSARVTQLEQQLEKVQKELEIIKEQRNQQKQLADSNGRQ
RDMYRILLSQSTGFNLPPQGPTQEAAPQMYTPSRPSFPPPSRSTPMRASAAESSQTTQAK
AALKQLNDSFTTYKNEKAVNDRMLNEQNEKLQEQLSAFRSQKAKLSTQLEFASKRYEMLQ
ENVNGYRREIAALHDKSQKMAATAQKHEQIIHTMTQDLRAANEKLALAEVRGENMKKERD
MLKSAESRLNQEKEAMMAEQRNQNLLLTNLKSIQLTMERTETETRQRLNSQIERLERELT
QFKKKLAEEVEQRHMLGRNQDAQLLEAKKQLEAQCALHQKTKELLKNAEQQANLLKQQLS
HAESQNQGSGLGQGQSLGQTNPRAPIRAPLRAPSQTQSQEAQAKLQSELEEVRGRLQQAE
KQINDLQERLQNASTNVEQYRTVVLSLEESLSKEKQARSPVETRLKEAQEFQRGLEKKLV
EAEKEKQELREEKRKAMDIVEKQVNELKRTMKNLQSELQEAEERKAAAITQEQKAMQDSL
QQGKLAAEAQNKYERELMLHAADVEALQAVKKQGLQGNQSRKQLEDKAKQTTTQLQEART
NWYQLEKKLKEDLSKQQKRADELQKQNGLLHQQMESLGAKMAATVQQQQRASRESSLNLS
FSEEGKSQEQILEILRFVRREKEIAETQFEVAEVETLRYKQQVEHQDRELKELQESLNAE
REKLQLTAKTMAQHDEKMKRMENLNVLVETNKMLKEERERLEQELHQTQAKVRKLEADIT
PLQDSNSELSEKNGMLQAEKKLLEEDSKRWKARTQQLVSQQKDTDQEENKKLHSEREAHL
KRIQQLSEETGRLKAEVARTHASVITAQSQAQNLKENLGKVTTERDAKHLDIQEKCKTIT
QVKKIGRRYKTQYEELKVQHDKLVAEAAAKPAQEEVLQAVQQAQQQAQQAQQASAQEIQS
LKDSLSQAETKVKDLEGQLKNVQETVNERNTEMGRLKQELTRLQEQSTQAQGTQSEVTRL
KQELTRLQEQSAQGTQGEVTRLKQELTRLQEQSTQAQGTQSEVTRLKQELTRLQEQSTQA
QGTQGEVTRLKQELTRLQEQSTQAQGTQGEVTRLKQELTRLQEQFTQAQGTQGEVTRLKQ
ELTRLQEQSTQAQGTQGEVTRLKQELQEKTAQEELLRQQMADKEEKTKKVFMGAKQKINQ
LNIAKEHLTKEVEELKQQREEQEVRLSALKSQYEGRLHRQDREIRELRDHRDEQPQRDES
QDQGKNKTQEQQQRAPDQRQINQRTSQAADRGSGSSGSSEQPPTANIKPTTVSGGAPSKP
SPIPGNKSTPRASIRPMVPITMPTPTATVMPHTQSESQEVLQSSESGTPVEHVSVFGSTS
GSVRSTSPSVQNITHSQFQPISSQATAFVQPTQQQQAPPTAELASQETEAGPSGQVERPS
TSTAVFGSAIATGGSAGPKRAREVELEARAESADMALENSDEPPIPKKLRIIQRVGLEEE
NEEGTDGEAEGSGENQETPDGSQELPDVSFPVLGEVEEEDDGVSQSVPSDHQVTPQPSDT
QDSSEERQPDVIIIDTDSSSREEEEEEAEQYEEEVEEEKDDDDDEDQGMGREESNEGSGD
ANEPFEGDETGPETSEPASENEESMGAIDSTSQKQADSQSGEGSSSTTESFPMAMSDPPK
ELLQPTASTTSTFSFSTSPFSPSSSLRLPQSVPRRPPHPLPPRLYIQPPGPELGLGPPPT
QRLSAPIRRQSVGRGPQLTPGIGNMQHFFDDDDRMVPSTPTLVVPHRTDGFAEAIHSPQV
AGVPRFRFGPPEDMPQASSSHSDLGQLASQGGLGMYESPLFLAAHDEESGGRSVPTTPLQ
VAAPVTLFNESHPSDAQDMASQSVPMVTTSTSHHGLAVPGGEAIPGDDGDEVFMEADSEG
RSGEASMDSQAEMDSAQPSDDASLPSTSQEPTSSSADTSSSVQPKPSGRPLAQHTLPMRT
ANRGRALIRRGGMGFLRAGRGPFGRGNLPR
NT seq
7653 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagttctgcttcaagttttggagcgtacagagctaaataaactccctaaagct
gctcaaaacaaattagaaaagttccttactgaccagaagaatgaaatcgaatccctcaaa
acgcagcacgagcggttcaaagcggactgtgagcagcaatactttgacgttgagaagaga
ttggcagagagtcaggagcagattgtgtctcacacccggaattaccagactctcaaagag
gagaataccaaactcatcgaagagctgaacaatctgaaaggtgtggatgtggaatcgtca
gaggagaaggaatcacagcagccgagcaaagccaaatatgagattgaggccgaaaggcgg
gaactggctcgtctgcttgaaaagagaactcaagatgtggaaaatctcaccgaggatgtc
aagcggctcaatgacaagctggtggagaccaacacagccaaaatagatctacagctcaaa
ctggatgagatccaatcttctgaggtctccattcagcaccgtgagaaacgtatggagcag
gagaaggagctactgcagaatcagaacacgtggctgaactctgaactgaagaccaagaca
gaggagctgctatcagtctccagggaaaagggcaaggagatcctggagctcaagtgcagc
tttgagtgcaagaaggacgaggtcacaagacttcaaacccaagtcactaatctgaagaag
agcagtgagaacctgcagaagcgagtggaggacctgatgacaaaactgaaagaggctaaa
gactatcatagcaccatggaggagaagtaccgcaatgaacagaatgcccacatcaagctc
tccaacttgtacaaggggtcagcatcagatgcagagtccaagaacgaggagttgagcagg
gccgtggaggagctgcacaagctggtgaaggatgctggtgatgcgagacagaacatggag
aagaagctggcagacatggaggggtcaaagagcaaacaggaggctgagctgaaggagaag
tttaagaagatggagctggagaacgccaacctgcgtgcctcagataagaaaagaagtatg
ccagtgctcacagaggaagagttggactccatgtgtccgaccgcagctgctgtggccaag
attgtcaagcctggaatgaagttcatggagctgtacaacgcattcgtggacatccaggac
cagttgctcgttgagaagcaggagaaccggcgtgtgacgcgcgtgctggacgagatcgtg
caggaggtggaggagaaggcgcccatcctaaagcgccagcgggaggagtatgagagcatg
cagaggtccatgaacagcctctgtgccaaactggaacaggccaggacggagatccacagc
ctgcagaaagagacagatgaggccaaaaagcactgctccaacctggagaaggacaaccag
cactctgagagagagctggaggacatgtcccagcaggtgcgcgtcctgctagtggagctg
gaggaggcgcgtggcaacccggtggtccgcgaggagacgatgaacatgagcagcagctct
gagatcatcaacccacgccaggtttccttccgcagtgtggaggagctgcagcggcaaaac
cagagcatgctggcacgtctccgggagctaggggagaagatggagagagagcagaccgag
gccaattctgcacgtgtgacccagctggaacagcagctagagaaggtccagaaggagctg
gagattataaaggagcagagaaaccagcaaaagcagctggctgactccaacggccgccag
agagacatgtaccgcattctgctgtcccagagcactggcttcaacctcccaccacaaggt
cctacacaggaggcagccccccagatgtacacccccagccggccctccttcccccctccc
tccaggtccacccccatgagggcttcagccgctgagtcttcccagaccacccaggccaag
gctgctctcaaacagttgaacgactccttcaccacatacaagaatgagaaggcggtgaac
gacaggatgctgaacgagcagaacgagaagctacaggagcagctgtctgcgttccgctcc
cagaaggccaagctctccacacagctggagttcgcctccaagagatacgagatgctgcag
gagaatgtaaacggctacaggcgggagatcgctgctctgcacgataagagccagaagatg
gccgccacggctcagaaacatgagcagatcatccacaccatgacccaggatctccgggca
gccaatgagaagctggccttggcagaggtgcgtggtgagaacatgaagaaagagagagac
atgctgaagtcagcagagtccagactgaaccaggagaaggaagccatgatggctgagcag
cgcaaccagaacctcctgctcaccaacctcaagtccatccagctgacgatggagcgtaca
gagaccgagaccaggcagcgtctgaacagccagatagagagactggagagagagctcacc
cagtttaagaagaaactggctgaggaggtggagcagaggcacatgctgggccgtaaccaa
gacgctcaactgctggaggccaagaagcagctagaggcccagtgtgccctgcaccagaag
accaaggagctgttgaagaatgctgagcagcaggctaaccttctgaaacaacagctcagc
catgctgaaagccagaaccagggttcaggtctgggccagggtcagagcctgggccagacg
aacccccgggcacccatcagagcaccgttaagagctccatctcagacccagtcccaggag
gcccaggccaagctccagtcagaactagaggaggtgcgcgggcgtctgcagcaggccgag
aagcagatcaacgatctgcaggagcgcctgcagaacgcgagcactaacgtggagcagtac
cgcaccgtggtgctcagcctggaggagtccctcagcaaagagaaacaggctcgttctcct
gtggagactcgtctaaaggaggcccaggagttccagcgtgggctggagaagaagctggtg
gaggctgagaaggagaaacaggagctccgtgaagagaagaggaaggccatggatattgtg
gagaaacaggtgaatgagctgaagaggaccatgaaaaacttgcagtcagagctgcaggag
gcggaggagaggaaggctgcagccatcacccaggaacagaaggccatgcaggacagcctg
cagcagggcaagctggcagcggaggcccagaacaagtacgagcgggagctgatgctgcat
gcggctgatgtggaggcgctacaggcggtcaagaaacaaggcctgcaggggaaccagagc
aggaagcagctggaggacaaggccaaacagaccaccacccagctacaggaggctcgcacc
aactggtaccagctggagaagaaacttaaggaggacctgtccaagcagcagaagcgggca
gacgagctgcagaagcagaatggcttgctgcaccagcagatggagagcctgggagccaaa
atggccgccacagtacagcagcagcaacgggctagtagggagagcagcctcaacctgtcc
ttcagcgaagagggcaagtctcaggaacagatcctggagatcctcaggtttgtgcgtcgt
gagaaggagattgcagagacacagtttgaggtggccgaggttgagacactgcgctacaaa
caacaggttgaacaccaggaccgagagctgaaggaactacaagagagcctcaacgctgag
agagagaaactacagctaacagcgaagactatggcccagcacgatgagaaaatgaagagg
atggagaacctaaacgtgctggtggagaccaacaagatgctgaaggaggagagggagcga
ctggaacaggagctgcaccagacccaggctaaagtgcgtaagctggaggcggacatcact
cccctgcaggactccaactctgagctgagtgagaagaatggcatgctgcaggctgagaag
aaactgttggaagaggacagcaaacgctggaaggcccgcacacagcaactggtgagccag
cagaaggacacagaccaggaggagaacaagaagctgcactctgagagagaggcccacctc
aaacgcatccagcagctctctgaggagactgggagactgaaggctgaggtggccaggacc
catgcatcggttatcacagcccagagccaggcgcagaacctgaaggagaatctgggcaag
gtgaccaccgagagggatgcgaagcacctggacatccaggagaagtgcaagaccatcacg
caggtcaagaaaatcggacgacgctacaagactcagtatgaggagctcaaagtgcagcac
gacaagctggtggcggaggcagcagccaagccagcccaggaggaggtgctgcaggctgtg
caacaggcccagcagcaggctcaacaggcccagcaggcctctgcccaagagatccagagc
ctgaaggactccctcagccaggctgagaccaaggtcaaagacctggaaggacaactgaaa
aacgtacaggagacggtgaatgagcgcaacacagagatggggcggctgaaacaggagctg
acccggctccaggaacagtctacccaggcccaggggacacagagtgaagtgacccggctg
aaacaggagctgacccgcctccaggaacagtctgcccaggggacccagggtgaagtgacc
cggctgaaacaggagctgacccggctccaggaacagtctacccaggcccaggggacacag
agtgaagtgacccgactgaaacaggagctgacccggctccaggaacagtctacccaggcc
caggggacccaaggtgaagtgacccggctgaaacaggaactgacccggctccaggaacag
tctacccaggcccaggggacccagggtgaagtgacccggctgaaacaggagctcacccgg
ctccaggaacagtttacccaggcccaggggacccagggtgaagtgacccggctgaaacag
gagctgacccggctccaggaacagtctacccaggcccaggggacccagggtgaagtgacc
cggctgaaacaggagctgcaggagaagactgctcaggaggagttgctacggcaacagatg
gccgacaaggaggagaagaccaagaaggtcttcatgggcgccaagcagaagatcaaccaa
ctcaacattgcgaaggagcatctgaccaaggaggtggaggagctgaagcagcagcgggag
gagcaggaggtgcgtctgagtgctctcaagtcccagtatgagggccgtctgcaccgacag
gaccgagagatcagggagctccgagaccaccgtgacgagcaacctcagagagacgagtcc
caggaccaggggaaaaataagacccaggagcagcagcagagagctccagatcagaggcag
atcaaccagaggacttcccaagctgcagacaggggaagtggttcttccggctcttcagag
cagccccccactgccaacatcaaacccaccacagtgtcgggcggtgcccccagtaaacct
tcccccatccccgggaacaagtccacccccagggccagcatccgacccatggtgcccata
accatgcccacccccacggcgactgtcatgccccatacacagtctgaaagccaggaagtg
ctgcagtcctctgagagtggaacccccgtggaacacgtgtctgtgttcggcagcaccagc
ggctcggtccgctccaccagccctagcgtccagaacatcacgcactctcagtttcagcca
atcagcagccaggccactgccttcgtccagccaacccagcaacagcaggccccgcccacc
gctgagctggccagtcaggagacagaggcgggccctagtggtcaagtggagaggccctcc
acttctacggccgtatttggctcagctattgctacagggggctctgctgggccaaagcgt
gcccgcgaggtggagctggaggctcgggcagagagcgccgacatggccctggagaactca
gacgaaccacccatccccaagaagctccgtatcatccagagagtgggactggaggaggag
aatgaagagggcactgatggagaggctgaggggtcaggggagaaccaggagactccagat
ggcagccaggaactaccagacgtgtcctttcctgtactgggagaggtggaggaagaggat
gacggggtgtcccagtctgtcccctcagaccaccaggtgaccccgcaaccctctgacacc
caggactccagcgaagagcgccagcctgacgtcatcatcatcgacacagacagctccagt
cgagaagaagaggaggaagaggcagagcagtatgaggaagaggtggaggaagagaaggat
gatgatgatgacgaggaccaggggatgggaagagaggagagcaacgaagggagcggagat
gccaacgagccgtttgaaggagacgagactggccctgagacctcggagcctgcctcggag
aatgaggagagcatgggagctatagactccacctcccagaaacaggctgactcacaaagc
ggtgaggggagcagcagtaccaccgaatccttccccatggccatgtccgacccccccaaa
gaactactacagcctactgctagtactaccagcactttctccttctctacctcccccttc
tccccctcctccagcctgcgcctgccccagtctgtcccccgccgacccccacaccccctg
cccccacgcctctacatccagccccccggccctgagctgggcctgggacctccacccaca
cagaggctgtctgcgccaatccgccggcagtctgtaggcagaggaccccagctcacgcct
gggataggcaacatgcaacacttctttgatgacgatgaccggatggtccccagtacgccc
acgctggtggtgccccaccggactgatggctttgctgaggccatccattctccacaggta
gcaggagttcccaggttcaggtttggtcctcctgaagacatgcctcaggccagctcgtcc
cactctgatctcggacagctcgcctcacaaggaggtttggggatgtacgagagtccactg
ttcctggccgctcacgacgaggagtctggagggaggagtgttcccaccacgcccctgcag
gttgctgccccagtgacgctcttcaatgaatcccacccctctgatgcccaggacatggca
tcccagtctgttcccatggtgacgacatccacgagccaccatgggctggcagtccccggc
ggagaggccatcccaggagatgacggtgacgaggtgttcatggaggcagacagtgaaggt
aggagtggtgaagcgtccatggatagccaggctgagatggactctgcccagccgtcagac
gatgccagtctgccctccacaagccaggagcccacctccagctctgccgacaccagcagt
agtgtgcagcccaagccctccggccgccccttggcccagcacactctgcccatgagaaca
gccaacaggggcagggcgctcatccgcagaggaggtatgggcttccttcgagcaggaaga
ggccccttcggtagaggaaacctaccccgctaa
DBGET
integrated database retrieval system
