Oncorhynchus gorbuscha (pink salmon): 124044011
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Entry
124044011 CDS
T07892
Symbol
cps1
Name
(RefSeq) LOW QUALITY PROTEIN: carbamoyl-phosphate synthase [ammonia], mitochondrial
KO
K01948
carbamoyl-phosphate synthase (ammonia) [EC:
6.3.4.16
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo00220
Arginine biosynthesis
ogo00250
Alanine, aspartate and glutamate metabolism
ogo00910
Nitrogen metabolism
ogo01100
Metabolic pathways
ogo01200
Carbon metabolism
ogo01230
Biosynthesis of amino acids
Module
ogo_M00029
Urea cycle
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
124044011 (cps1)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
124044011 (cps1)
00220 Arginine biosynthesis
124044011 (cps1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ogo01002
]
124044011 (cps1)
Enzymes [BR:
ogo01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.16 carbamoyl-phosphate synthase (ammonia)
124044011 (cps1)
Peptidases and inhibitors [BR:
ogo01002
]
Cysteine peptidases
Family C26: gamma-glutamyl hydrolase family
124044011 (cps1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
GATase
CPSase_sm_chain
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATPgrasp_Ter
ATP-grasp_3
Peptidase_C26
Motif
Other DBs
NCBI-GeneID:
124044011
NCBI-ProteinID:
XP_046219255
LinkDB
All DBs
Position
LG09:complement(71597602..71693285)
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AA seq
1518 aa
AA seq
DB search
MTKILTACNVVKSLRLGWLAARRSSNPACLRSARLFSVKAQIAHLVLEDGTRMKGFSFGD
ERSAAGELVFNTGLVGYPEALTDPSYRGQILTLTYPIVGNYGVPNTQELDELGLRRNIES
DRIQVSGLLVQDYSHEYSHWNSVKSLGQWLQEEKVPALFGVDTRMLTKIIRDKGTVLGKI
EFEGHPIEISDPNQQNILAEVSTKETRVFGKGNPIKVVAVDCGIKHNIIRLLVKRGAEVH
LVPWNQDLMSLEYDGLFISNGPGDPSLAGDLIQNVRKVLESDRPQPVFGICMGNQITALA
AGAQSYKLPMGNRGQNQPVLNVMTGQAFITAQNHGYGIDSTSLPPGWSPLFVNANDGTNE
GIMHDTKPVFTAQFHPEAKGGPTDTEFLFDVFISLIKNGKEANIVSVMPKKPAIPPRTQV
SKVLVLGSGGLSIGQAGEFDYSGSQAVKAMKEENVRTVLMNPNIASVQTNEVGTKQADSV
YFLPVTPQFVTEVIKTERPDGILLSMGGQTALNCGVELFQSGVLQKYGVKVLGTPVESIM
ATEDRQLFADKLNEINEKIAPSFAVETVADALKAADQIGYPVMLRSAYSLGGLGSGFCAN
KDKLEETARKALAMSCQILVEKSLMGWKEVEYEVVRDIANNCVTVCNMENFDPLGIHTGD
SIVVAPSQTLSNEEYHMLRETAIKVVRHLGIVGECNIQYALHPGSLEYCIIEVNARLSRS
SALASKATGYPLAFVAAKLALGIPLPEIKNTVSEKTTACFEPSLDYIVTKIPRWDLDRFQ
GMSREIGSSMKSVGEVMAVGRTFEESMQKALRMCHPSVDGFMPRLPLNKPWSAQQDLHQE
LAVPSSTRVFSLAKALHSGVTVDHIHHLTAIDKWFLHKLRRITELEQHLSQFNSATLPQT
LLLKAKQDGFSDRQVGQALGSSEGEARVLRLAQNIKPWVKQIDTLAAEYPAVTNYLYCTY
HGQEHDLEFKDHGVMVLGCGPYHIGSSVEFDWCAVSSIRALRQMGMRTVVVNHNPETVST
DFDECDRLYFEELTLERILDITQQEGCTGSIVSVGGQIPNNLAMPLHLNGVKILGTNPQQ
IDRAEERSVFSTILDELGVAQAPWKALSSLEDAFAFANKVGYPCLLRPSYVLSGSAMNVA
YGEEEMRGFLDEATQVSQEHPVVITKFIRGAREVEVDAVAKMGKVLCHAITEHVEDAGVH
SGDATLMLPTQSISQGALEKVKSATRKIAKAFEISGPFNTQFLVKGNDVMVIECNLRASR
SFPFVSKTIGVDFISVATRVMVGEPQDEAALPSLENPIIPVDYVGIKAPMFSWPRLRDAD
PVLRCEMASTGEVACFGPNIYSAFLKAMLSTGFKLPTKGILIGIQHSFRPNFLATAHQLN
EEGFKLFATEATSAWLSANDVPATPVAWPSQEGGDASLPSIIRLINEGHIDLVINLPNNN
SKFLRDNFLIRRMAVDHGVPLITNYQVVKLFAEAIKYASELDTTSLFHYRQRDADRQRDA
DLEKEADRLRDAAAGLQS
NT seq
4557 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaatattgacagcctgcaacgtcgtcaaatcactgaggctaggatggctcgca
gccagaagaagcagcaaccctgcttgtttgaggtctgctaggctcttcagtgttaaggcc
cagatagcccacctggtcctggaggatggtacccggatgaagggcttctcctttggggat
gaacgatctgctgctggggagctggtcttcaacactggcctggtggggtacccagaggct
ttgactgaccccagctacagaggtcaaatcctgaccctgacctaccctatagtggggaac
tacggcgttccaaacactcaggagctggatgagctgggcctgaggaggaacattgagtca
gaccgtatacaggtatctggactcttggtgcaggattacagtcatgagtacagtcactgg
aactctgtcaagtccctgggacagtggctacaggaggagaaggttcctgcattgtttgga
gtggatactaggatgctgaccaagatcatcagagacaagggtacagtgttggggaagata
gagtttgagggccatccaatagagatatcagaccctaaccagcagaacattttagcagaa
gtctcaacaaaggagaccagagtgtttgggaaaggtaaccccatcaaagtggtggctgtt
gactgtggcatcaagcacaacatcatcaggctgcttgttaagcgtggtgctgaggtccat
ctggtgccctggaaccaggacctgatgagtctggagtacgatggcctgttcatctccaac
ggccctggggatccctctctggcaggagacctcatacagaacgtccgcaaggttctggag
agtgaccggccacagcctgtctttggtatctgtatgggcaaccagatcacagcactggct
gcaggggcccagtcctacaaactgcccatgggtaacagaggtcagaaccagcctgtactc
aacgtgatgacgggtcaggccttcatcacagcccagaaccatggttatggcattgacagc
acctctctaccacctggatggagcccgctgtttgttaacgccaacgacggaaccaacgaa
ggtatcatgcacgacaccaagccagtcttcacggctcagttccacccagaagctaaaggt
ggacctacagacactgagttcctatttgatgtgttcatatccctgataaagaatgggaag
gaggccaacattgtgtcagtcatgcccaagaagcctgctatcccacctaggactcaggtt
tccaaggtgctggtgctggggtctggaggtctgtccattggtcaggctggggagtttgac
tactctggatcacaggccgtcaaagccatgaaggaggagaacgtgaggacggtgctgatg
aatccgaacatagcatctgtgcagaccaacgaggtggggactaaacaggctgactctgtc
tacttcctgcctgtcacgcctcagtttgtcacagaggtcattaagaccgaacgacctgac
ggaatccttctgtctatgggaggacagaccgctctaaactgtggagtggagctgttccag
agtggggtactgcagaagtatggggtgaaggtgttggggacccctgtagagtccattatg
gctactgaagacagacagctgtttgctgacaagcttaacgagatcaatgagaagatcgct
cccagcttcgctgtggagacggtggcagatgccctgaaggcagcggatcagataggctac
cctgtcatgctacgttctgcctattccctgggcggactgggctcaggattctgtgccaac
aaggacaagctggaggagaccgctcggaaggccctggcgatgagctgtcagatccttgtg
gagaagtctctgatgggttggaaagaggtggagtatgaagtagtcagggacatcgctaat
aactgtgtcactgtctgcaacatggagaactttgaccccctcggcattcacacaggtgac
tctattgtggtggcccccagccagactttgtccaatgaggagtaccacatgctgcgtgag
acggccatcaaggtagtgcgtcacctgggcatcgtgggggagtgtaacatccagtacgcc
cttcaccctggctctctagagtactgcatcatagaggtcaacgctcgcctctcacgcagc
tctgccctcgcatccaaggccaccgggtaccccctggcgtttgttgcagccaagctggct
ttgggcatccctctgccggagatcaagaacacggtgtcagagaaaaccacagcctgtttc
gaaccaagcctggattacattgtcactaagatccctcgctgggaccttgaccgattccag
ggcatgtcccgagaaataggcagctccatgaagagtgttggagaggtgatggcggttggg
cgtacatttgaggagagcatgcagaaggctctgagaatgtgccacccctctgtggacggg
tttatgccccgcctgcccctcaacaagccttggtcggctcagcaggacctacaccaggag
ttggctgtaccctccagcacacgggttttctccctggccaaggcccttcacagtggtgtg
actgtagaccacatccaccatctcactgccatagacaagtggttcctacacaagctacga
cgcatcacagagttggagcagcacctgagccagttcaacagtgcaacattaccccagacc
ctgctgctgaaggctaaacaggacggcttctcagaccgccaggtgggccaggcccttggc
tccagcgagggggaggccagagtgttgaggctggctcagaacattaaaccctgggtgaaa
cagattgacacccttgctgcagagtaccctgctgtgaccaactacctgtactgtacctac
catggacaggagcatgacttggagttcaaggaccatggtgtcatggtgctgggatgtggt
ccctatcacattgggagcagtgtggagtttgactggtgtgcagtgtccagtatccgagcc
ctgcgtcagatgggcatgcggacagtggtggtaaaccacaaccctgagactgtcagcacg
gactttgacgaatgtgaccgcctgtactttgaagagttgactctggaacgcattctggac
atcacacagcaagagggctgtacaggcagcatcgtgtctgtagggggtcagatccccaat
aacctggccatgcctctgcacctgaacggggtcaagatcctaggaaccaacccccagcag
atcgaccgagccgaggagaggtcagtgttctccaccatcctggatgaactgggggtggcc
caggccccgtggaaggccctcagctcactggaagatgcctttgcctttgccaataaagtg
ggatacccctgtctcctgcgcccctcttacgtgctcagtggctcagcaatgaacgtggca
tacggtgaagaagagatgaggggcttcttggacgaggctactcaggtgtctcaggagcat
ccagtggtcatcaccaagttcatccgtggagccagagaggtggaggtggatgcagtggcc
aagatgggaaaagtgctgtgccatgctataacagagcatgtggaggatgctggggtccac
tctggagatgccacactcatgctacctacccagagcatcagccagggggccctagagaag
gtgaagagtgccacacggaaaattgctaaggcgtttgagatctctggtccattcaatact
cagttcctagtgaaaggcaacgatgtcatggtgatagagtgtaacctgcgagcatcacgc
tccttccccttcgtatctaagaccatcggtgtggacttcattagtgtggctacacgggtc
atggtgggtgaaccccaggatgaggctgctctaccttctctggagaaccccatcatcccc
gttgactatgtgggaatcaaggctcctatgttctcctggcctcgccttcgtgatgccgac
ccagtcctgcgctgtgaaatggcttccacaggagaggtggcttgttttggaccaaacatc
tactctgccttcctcaaggctatgctatccactggcttcaagctgcctacaaaaggaatc
ctcatcgggatccagcattcgttccggcccaacttcttagccacagcacaccagctgaat
gaagaaggctttaagctctttgctacagaggccacctcggcctggctctctgccaatgat
gtgcccgccacccctgtggcatggcccagccaggagggaggagatgccagcttgcccagt
attatcaggctgatcaatgagggccacattgacctggtgataaaccttcccaacaacaac
agcaagttcctcagggacaatttcctaatccgcaggatggctgtggaccacggggtgcct
ctcatcaccaactaccaggtggtcaagctgtttgctgaggccataaagtatgccagcgag
ttggacaccaccagcctgttccactaccgccaacgggacgctgaccgccaacgggacgct
gacctcgaaaaggaagctgaccgccttagggacgctgccgccggactgcagagctag
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integrated database retrieval system
