Oncorhynchus gorbuscha (pink salmon): 124045973
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Entry
124045973 CDS
T07892
Symbol
parp4
Name
(RefSeq) protein mono-ADP-ribosyltransferase PARP4 isoform X1
KO
K10798
poly [ADP-ribose] polymerase 2/3/4 [EC:
2.4.2.30
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03410
Base excision repair
ogo04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
124045973 (parp4)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
124045973 (parp4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ogo03032
]
124045973 (parp4)
03036 Chromosome and associated proteins [BR:
ogo03036
]
124045973 (parp4)
03400 DNA repair and recombination proteins [BR:
ogo03400
]
124045973 (parp4)
Enzymes [BR:
ogo01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
124045973 (parp4)
DNA replication proteins [BR:
ogo03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
124045973 (parp4)
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
124045973 (parp4)
DNA repair and recombination proteins [BR:
ogo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
124045973 (parp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VIT
PARP
VWA_3
VIT_2
VWA
BRCT_2
VWA_2
BRCT
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
124045973
NCBI-ProteinID:
XP_046221796
LinkDB
All DBs
Position
LG01:92482490..92513189
Genome browser
AA seq
2041 aa
AA seq
DB search
MSTALYTQSVMERAAMALFDNCFVVLELKNLPYKEKNRLKLAITENGGSISYVINKQCTL
VVTSSMSSLSSSRVRSMKKHQTPVVGVEYVSLCLEKGVLLPVEDYCLPPPPSTSLIPPRP
ASPLPSQSVLKGTSQPAEVQTQTVNAVNQAERAGNQESTYLGKFRVYTESDNDLPTYPTN
FQVAKYSIFGKANSSTWSVLELQSGSTEGGQQQYRVVRYWREDHGAKSAAVQDKQVFLSM
SEEAVEVYQTLRKELQVRGLTLRTTLPPEAPDLGSASLQQLLLEEKLSCSSLSQEVGVFV
ELLWAEALGCLDNVLKVPITSLSLNDVSRAEGLLLQVQRKLRARQGEGPDTEVASLMEEV
YTLLPHKTDLSHLPLHTKLISSQLDLCQLIRDVLNVSEATLRSPIPSCLGKYRALRCSIE
RVPPGPEFLYVTELLQDRQVQILQVLRVNRGVELQMFREELGNVKPLLHSSSPSSFVGIL
SRGLLLPRVGVEHHGIERTDIGNLGCGIYFSDAISTSLKYSKPSVTDGSRLLLVCDVALG
RCTDLQKRDSSLTHSPEGYHSVHGVRHTPKKPSEFDDDEYVVYSPEQVRLQYVVQFRLEE
DQLKNFQPTIDTSSTELPLPVSPSDLLSCGEAEEDVGSCKNPLEEVTAGLLDCSGQPLPL
QAVHVRARLMDLLSQVIIFQTYTNQSTAPIEAKYVFPLDDSAAVCGFEAFINGKHVMGQV
KEKQQARKEYKQAIERGHGAYLMDQDAPDVFTISVGNLPAGATVLIKVTFVTELVVMDGL
INFSLPGSVAPWQQSSALNQRTQVTLEKVCVTNLDSQGEFSLDMSIEMPNEIINLHCLTH
KVKIKRTDCKAVVRTCPGETLGPDGFLLCFSLAQIHLPRMWVEKHPDKDSQACMLVFYPD
FEPCPTSSPMSGSSEVILLLDSSESMRGEALQNARRIALQLLNTLDHHSIRFNVISFGSD
QKDAFLSANPLVEALQPAKKFIMSSSPVGGNTELWRPLRSLSLLPPSQGVRNLLLLSDGH
VQNQALTLQLVRQHAQHSRLFTCGLSPTANRHMLRALAQAGGGAYEFFDTKTKHTWQEKV
ACQVKRIVSPGCSSVSVKWQQFNPSAPPPVQAPSQLHALFTDCHTLVYGFVPHCTQATLL
GDLSGQNIETMVSTTELQKTRGTFLHKLTARAVIRDYEDGSLHTNEAEHEGKKLVMKSFI
IELSKEFSILSQFTSFVAIEERNSEQPDVGFTDVPKLISDEDVDFLPYLSWQQEEYEGDG
MDSMSNLLISGPGHVLCRNTCLEERGMGEEYESMVQLQMDDESWEGSVNLHSKFLNQRAT
DEVLLGRRLNSSYFMGSMVSASPVTLSAATEPLDMTLKSEGAVTEEEMECFDDMDFDLQE
SEHPLCASVIMHSEALSSSSSPTLHTLSGSQCIPGTPYLTTTMVPMAMKTDFIPELSETF
YSLPKIMKRAKSIKGDFRRADRHRKVCDGPAFDPVETQKKSLSVADVPRPPPSVHLQIKS
CVVADALPPPPPASALSSPCPPPFRPQSFSAAVSDSLPPPPPPPAPVLCSPCPPPFRPES
FSAAISDSLPPLPPPASVLSSPGPPPFRLQSFSAGGSGSLPPPSTLVSNEFRAIRYEMGV
NARPGVEAISHTATFPKLRASGDLLLSKPREPYPVELSSICETSKMWTLDNSLSDDKICG
LVEMDHWQPSVVPASVPPPGFGFGGGRAGSQSRQPHSSLFGATASACYIPGLYEGSSAGG
PPLGGSARSMGLSFEAPLTGGHLSSLSPTTHGAYLTQSLGALVGSSQFGSSLSALQQHNV
LPQAQKPLDMKKNVQKLVGDSERYVSASVRPSLCLSVCDLYWRHILLCVALWYPNEVGFD
FRRGGLEFRKRGLEFRKNTLDVVKWTEIFALQHSEGYWECSASLGYLLGVDVDYFANVFL
KNRGISSLGVRAHADILRLVASLLVLQLMRVRKLDEGKLLLSLFRLDLDHSPPQPRCERW
EAVRRAVDWVCWADREYPCVCSRLEFGWDWESSTRQLLGIDPPHPLSPLILLGTTGGVRA
Q
NT seq
6126 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaccgccctctacacacagtctgtcatggaaagagcagctatggctctgtttgac
aactgttttgtggttttggagctgaagaatttgccttataaggagaagaataggctgaag
ctggcaataacagagaatgggggcagcatttcctatgtgatcaataagcagtgtactctc
gtagtgacgagcagtatgtccagtctgagctccagtcgggtgcggagcatgaagaagcat
cagactccagtagtaggggtggagtatgtgtcactctgcctggagaagggagtcctgctg
cctgtagaggactactgcctgcccccccctccctctacctctctcatcccacccaggcct
gcctctcccttgccatctcagtcagtgttgaaggggacgagccagccggctgaagttcag
acccagacagtgaatgctgtaaatcaagccgagagggcagggaatcaggagagtacttac
ctgggcaaattcagagtgtatactgaaagtgacaatgatctaccaacatatccaacaaat
ttccaagtggccaaatactccatttttggaaaggctaacagcagcacatggtcggtgttg
gagctgcagagtggcagcacagaggggggacagcagcagtaccgtgtggtgaggtactgg
agagaggaccatggtgctaagtcagcagctgtgcaggacaagcaggtgttcctctccatg
tcagaggaggctgtggaggtctaccagactctcaggaaggagctgcaggtcagaggactc
acactgaggaccaccctccctccagaggctccggatctgggctctgccagcctgcagcag
ctgctgttggaggagaagctgagttgcagcagcctatcacaggaagtgggcgtgttcgtg
gagctgctctgggcagaggcccttggttgtctggacaacgtcctcaaggttccaatcacc
agcctcagtctcaatgacgtgagcagggctgaggggctgctgctacaggtccagaggaag
ctgagggcgagacagggggaggggccagacactgaggtggcttctctaatggaggaggtc
tacaccctcctgccacacaaaactgatctgtcccatctccctctccacactaaactcatc
tcatcgcaactggacctctgccagttgatcagagacgtgctgaatgtgagcgaggcaaca
ctgagaagccccatcccttcttgtctggggaagtaccgcgccctgaggtgtagcattgaa
agagttccccctggtcctgaatttctgtatgtcaccgaacttctacaggacagacaggtg
cagatcttgcaggtgctgagagtaaacagaggggtagagctgcagatgtttagggaggag
ctggggaacgttaagcccctcctccactcctccagccccagcagctttgtggggatcctg
tctcggggtctgttgctgcccagagttggagtggagcatcatgggattgagagaacagac
attgggaacttgggctgtggcatctacttcagtgatgcaatcagtaccagtttgaagtac
tctaagcccagtgtgacggacggcagtcggctgctgctggtgtgtgacgtggcgttgggg
cgctgtactgacctccagaagagggacagcagcctgactcactcccctgagggataccac
agtgtacacggggttcgccacacccccaagaaaccctcagagtttgacgatgatgagtat
gtggtgtacagcccggagcaggtgaggctgcaatatgtggtacagttcagactggaggag
gaccagctgaagaacttccagcccaccatagatacttcttctaccgagcttccgcttcct
gtctctccgtctgacctcttgtcctgtggtgaggctgaggaggatgttgggagctgtaag
aaccctctagaggaggtgactgcaggcctgttggactgctctggacaaccactcccccta
caggccgttcatgtcagggccaggctgatggatctgctctcccaggtcatcatcttccag
acatacaccaatcagagcaccgcccccatcgaagccaagtacgtcttcccattggatgat
tctgctgctgtgtgtggttttgaggccttcatcaatgggaaacatgtaatgggacaggtg
aaggagaagcagcaggcgcgtaaagagtataaacaggccatagagagaggccatggagct
tacctaatggaccaggatgcacctgatgttttcaccatcagcgttgggaacctgcctgcc
ggtgccaccgtccttatcaaagttacctttgtcaccgagctggttgtcatggatggcttg
atcaacttctcattgcccggtagtgtggcgccatggcaacagagctcagcactcaaccag
aggactcaggtgactttggaaaaggtgtgtgtgaccaacctggattcccaaggggagttc
agtctggatatgtccattgagatgcccaacgagatcatcaacctgcactgtctcacacac
aaagtcaagatcaagaggaccgactgtaaggcggtggtgaggacatgtccaggtgagact
ctgggtccagatgggttcctgctctgcttcagtctggctcagatccacctacccaggatg
tgggtggagaaacacccagataaagacagccaggcctgtatgctggtattttacccagac
tttgagccctgccccacctccagccccatgtccggctccagtgaggtgatcctgctgttg
gactcgtctgagtccatgagaggagaagctctccagaacgccaggagaatcgccctgcag
cttctgaataccctggaccaccacagcattcgattcaatgtcatctcctttggctcagac
cagaaggatgcttttctctctgccaaccctctagtcgaggccctccaaccagccaagaag
ttcatcatgtcttcctcacctgttgggggcaacactgagctgtggaggcccctgcgcagc
ctgagtctgttgcctccgtcgcagggcgtaaggaacctgctgctgctatcagacggtcac
gtccagaaccaagccctgaccctgcagctggtgagacagcatgcccagcacagccgcctc
ttcacctgcggcctcagcccaacagcgaatcggcatatgttgcgggccctggcccaggca
gggggaggggcctatgagttctttgacacaaagacaaagcacacctggcaagagaaggtg
gcgtgccaggtgaagcgcatcgtgtctccaggctgcagctctgtgtctgtgaagtggcag
cagtttaacccctcagctcccccccctgttcaggcgccctctcagctccacgcactcttc
actgactgccacaccctggtctatggcttcgtgccacactgtacacaggccactcttctt
ggagacctgagtggtcagaacattgagacaatggtgtccaccactgagctacagaaaacc
aggggcacgttccttcataagctcacagcgagggccgttatcagagactatgaggatggc
agtcttcacaccaacgaggctgaacatgaggggaagaaattggtgatgaagtccttcatc
attgagctgagtaaagagttctccatcctttctcagttcaccagctttgttgccatcgag
gagaggaactcagagcagcctgacgtgggcttcacagatgttcccaaactgatctcagac
gaggacgttgacttcttaccttaccttagctggcagcaggaggaatacgagggagatggg
atggactcaatgtcaaacttgctgattagtgggccagggcatgttttatgcagaaatacc
tgtctagaggagagggggatgggggaggagtatgaatcgatggttcaactccagatggat
gacgaatcatgggaaggatctgtgaacttacattccaaatttctcaatcagagggctacg
gatgaggtgcttcttggtaggagacttaattcctcttacttcatgggctctatggtctca
gccagcccagtgaccttgtccgctgctaccgaacctctagatatgactttgaagagtgaa
ggagctgtgacggaagaagagatggagtgctttgatgacatggactttgatttacaggaa
tctgaacaccccctttgtgcctcagtaatcatgcatagtgaggctctgtcctcttcttcc
tctccaactctccacacgctttcaggcagccaatgcattccaggcaccccataccttact
accactatggtgcctatggctatgaagacggatttcatccctgagctgtctgagaccttc
tactctctcccaaagataatgaagcgtgcgaagagtataaagggagactttagacgggcg
gacagacacaggaaggtttgtgacggtccggcatttgaccctgtagagacacagaagaag
tctctctctgttgctgatgtgcctcgtcctcctccctctgttcatcttcagatcaagtct
tgcgttgttgctgatgctcttcctcctccaccccctgcttctgccctcagttctccttgt
cctcctccatttcgacctcagtctttctctgccgcagtttcagattctcttcctcctcct
cctccaccccctgctcctgtcctctgttctccttgtcctcctccatttcgacctgagtct
ttctctgccgcaatttcagattctcttcctcctcttccaccccctgcttctgtcctcagt
tctcctggtcctcctccatttcgactgcagtctttctctgccggaggttcaggttctctt
cctcctccctctactcttgtctccaatgagtttcgagcgattagatacgagatgggagtt
aatgccagacctggagttgaggctatctcccatactgcaaccttcccgaaactgcgagcc
agtggggacctgctactttccaaaccccgagagccctatcctgtggaactgtcgtcaata
tgtgagactagcaaaatgtggaccttggataatagcttatccgatgataagatttgtgga
ctagtggaaatggaccactggcaaccttctgttgtccctgcctctgtgcccccgccaggg
tttggtttcgggggcggaagggcaggttctcaaagcagacaacctcacagctctttgttt
ggggccacagccagtgcatgttacattccaggtttatatgagggttcttcagcaggcgga
ccacctcttggaggctcagccagatcaatggggttaagttttgaggcaccacttactggc
ggacacctcagttccctttcacctaccactcatggcgcctatctgacccaatctttaggg
gccttagttggatcctctcagtttggtagctctctcagtgcactacaacaacataatgta
ctaccacaagcacaaaaacctctggatatgaaaaaaaacgtacaaaaacttgtcggagac
agtgaaaggtatgtgtcagcgtccgttcgtccgtcactttgtctgtctgtgtgtgacctc
tattggagacatatattgttatgtgtagctctgtggtatcctaatgaggtaggttttgat
ttcaggaggggaggtcttgaattcaggaagagaggtcttgaattcaggaagaatactctt
gatgtagtaaaatggacagagatttttgccctccagcactcggaaggttactgggagtgc
tctgccagcctgggctacctcctcggtgtggatgtggactactttgcaaatgtcttcctg
aagaatagaggcatcagctctctaggtgtgagggcccatgctgacatcctgaggctggtg
gccagtctgctggtgctgcaactgatgagggtgaggaagctagatgaggggaagctgctg
ctcagcctgttccgtctggacctggaccactctcctcctcagcccaggtgtgagcgctgg
gaggcggtgaggagggcggtggactgggtgtgttgggcagacagggagtacccgtgtgtg
tgcagcaggctggagtttggctgggactgggagtcgtccacacggcagctcctgggcatc
gaccccccgcaccccctctctcccctcatcctcctcgggaccacagggggagtgagggcc
caatga
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