Oncorhynchus gorbuscha (pink salmon): 124048905
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Entry
124048905 CDS
T07892
Symbol
grin1a
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1a isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04020
Calcium signaling pathway
ogo04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
124048905 (grin1a)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
124048905 (grin1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ogo04040
]
124048905 (grin1a)
Ion channels [BR:
ogo04040
]
Ligand-gated channels
Glutamate (ionotropic)
124048905 (grin1a)
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GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
124048905
NCBI-ProteinID:
XP_046226028
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Position
LG11:52298641..52341676
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AA seq
949 aa
AA seq
DB search
MRLFLLAVFLSCSCARGGCEPKIVNIGAVLSQKRYEQVFKDAVTQANQIYGRDKFKLTAI
SVTHKPNAIQMALSVCEDLISNQVYAILVSHPPQSNDHLTPTPVSYTAGFYRIPVVGLTT
RMSIYSDKSIHLSFLRTVPPYSHQAHVWFDMMREFRWNHIILIVSDDHEGRAAQKRLETL
LEERETKNKKRNYENLDQLSYDNKRGPKAEKVLQFSQETNLTALLLEAKELEARVIILSA
SEEDAAAVYKAARFLNMTGSGYVWLVGEREMSGKALSEAPDGLIGLQLINGKNESAHIND
AVAVVAQSIQELFEKENITEPPRGCVGNTNIWKTGPLFKRVLMSSKYPEGLTGRVEFNDD
GDRKYAHYSILNYQKSRLIQVGIYNGTQVVMNNQRKIIWPGGETEKPRGFQMSTRLKIVT
IHQEPFVYVKPTEQDGTCKEEKTLNGVADIKKVICTGPNETIPGRPIVPQCCYGFCIDLL
IKLAGTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLGGLADMIVAPLTINNER
AQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRF
SPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMII
VASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMY
RHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIGMR
KDSPWKQNVSLAILSSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVAGG
IAAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQPSSSLETQDDRKSGRAEPPD
PKKKASFRSISTSLASSIKRRRSSKDTQYPPTDITGQLNLSDPSVSTVV
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgtttctgctggcggtgttcctctcgtgctcttgcgcgcggggcggctgcgaa
ccgaagatagtgaacatcggagcagtcctgagtcagaagaggtacgagcaagtctttaag
gatgcggtgacccaggcgaatcagatctacgggagagataaattcaagttgaccgccatc
tccgtaacgcacaaacccaacgctatccagatggctctctccgtctgcgaggacctcatc
tctaaccaggtgtatgccatcctggtgagtcatcctccccagtccaatgaccacctcacc
cccacgcctgtgtcatacaccgcaggcttctaccgcatccctgtggtgggcctcaccacg
cgcatgtccatctactccgacaagagtatccacttgtcctttctgcggactgtccccccg
tactcccaccaggctcacgtgtggttcgacatgatgcgagagtttcgatggaaccacatc
atcctgattgtcagcgatgaccacgaggggcgggccgcgcagaagagactggagacccta
ctggaggagagggaaacaaagaataaaaaaaggaactatgaaaacctcgaccaactgtcc
tatgacaacaagcgaggacctaaggcagagaaagtcctccagttcagccaggagactaac
ttaactgctctgcttctggaggccaaagagctggaggctcgtgtcatcatcctctccgcc
agtgaagaggacgctgctgcagtttacaaggctgcccgtttcctcaacatgacgggctcg
ggttacgtgtggctggtgggagagcgggagatgtcgggtaaagccctgagtgaggcacca
gatggtctcatcggcctccagctcatcaacggcaagaacgagtcggcccacatcaacgac
gcagtggcagtggtggctcagtccatccaggagctctttgagaaggagaacatcacggag
ccgcccagaggctgtgtgggaaacaccaacatctggaagaccggccccctcttcaaaagg
gttctgatgtcatcaaagtacccagagggcctcactggacgtgtggagttcaatgacgat
ggcgacaggaagtacgctcactacagcattctcaactaccagaagagtcgactcattcaa
gtcgggatttacaatggaactcaggtggtgatgaataatcagaggaagatcatctggccg
ggaggagagacagagaaaccgcggggctttcagatgtccacaagactaaagatagtgacc
atacaccaggagccctttgtgtatgtgaaacccactgagcaggatggaacctgcaaggag
gaaaaaaccttaaatggagtggcagatattaaaaaggtgatctgcactggaccaaatgag
accatcccaggacgtccaattgtacctcaatgttgttatggattctgtatcgatctactt
atcaagttggccggaaccatgaactttacctatgaggtgcacctggtggctgatgggaaa
tttggaacacaggagcgggtgaacaacagcaacaagaaagagtggaatggcatgatggga
gagctcctggggggtctggcagatatgattgttgccccgctgacgataaacaacgaacga
gcccagtacatcgaattctccaaaccttttaagtaccaaggcctaaccatcctcgttaaa
aaggaaatccctcgcagtacactggactcgttcatgcagccttttcagagcacactgtgg
ctgctggtgggtctttcggtgcatgtggtggcggtgatgctttacctactagaccggttc
agcccgtttgggaggtttaaagtaaacagtgaagaagaagaagaagacgccctcaccttg
tcctcagccatgtggttctcctggggagtgttgcttaactccggtattggggaaggcgcg
ccgcgcagcttctcagcgagaatcttgggcatggtgtgggccggctttgccatgatcata
gtggcatcttatactgccaacctggctgccttcctggtgctggaccggcctgaggagcgc
atcaccggcatcaacgacccgaggctgaggaacccatcagacaagttcatctacgccact
gtgaagcagagctctgtggacatctacttccggcggcaggtggagcttagcaccatgtac
cgccacatggagaagcacaactacgagagtgccgctgaggctatccaggccgtgcgcgac
aacaagctgcatgctttcatctgggactctgcggtgctggagtttgaagcctcgcagaag
tgcgacctggtgaccacgggagagctgtttttccgttcgggctttggcataggcatgcgc
aaggacagcccctggaaacagaatgtgtccctggccattctcagttcccatgagaatgga
ttcatggaagatctagataaaacctgggtgagataccaggagtgtgactcacggagcaat
gccccagccacactcacctttgagaacatggcaggagtgttcatgttggtggctggaggc
atagcagcagggatcttcctcatctttattgagatcgcctacaagcgacacaaagacgcc
cgaaggaagcagatgcagctggcctttgcggccgtcaacgtctggaggaagaacctgcag
ccctcttcctctctagagactcaggatgataggaaaagtggtagagcagagccccccgac
cccaaaaagaaagcctcttttaggtccatcagtacctccctggcctccagcatcaagaga
cgtaggtcgtccaaagacacgcagtacccacccaccgacatcacgggccagctcaacttg
tccgacccatctgtcagcacagtggtgtga
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