Opisthocomus hoazin (hoatzin): 104333644
Help
Entry
104333644 CDS
T08436
Symbol
POLR3A
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
oha
Opisthocomus hoazin (hoatzin)
Pathway
oha03020
RNA polymerase
oha04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
104333644 (POLR3A)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
104333644 (POLR3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oha03021
]
104333644 (POLR3A)
Enzymes [BR:
oha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
104333644 (POLR3A)
Transcription machinery [BR:
oha03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
104333644 (POLR3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
104333644
NCBI-ProteinID:
XP_009937478
LinkDB
All DBs
Position
Unknown
AA seq
1382 aa
AA seq
DB search
MCNFPSRSHICFGMKSPEEMRQQAHIQVVSKNLYSQDNHHSPLQYGVLDHRMGTSEKDRP
CETCGKNLADCLGHYGYIDLELPCFHVGYFKAVIGILQMICKTCCRILLSVEEKKQFLDY
LKRPGLTYLQKRGLKKKVSEKCRKKNTCPYCGAFNGTVKKCGLLKIIHEKYKTNKKVVDP
IVSTFLQSFETAIEHNKEVEPLLGRAQENLNPLVVLNLFKRIPAEDIPLLLMNPEAGKPS
DLILTRLLVPPLCIRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRISGAKTQMIME
DWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKRVDFSGRTV
ISPDPNLRIDEVAVPIHVAKILTFPEKVNKANINFMRKLVRNGPDLHPGANFIQQRHTQM
KRFLKYGNREKMAQELKFGDTVERHLIDGDIVLFNRQPSLHKLSIMAHIARVKPHRTFRF
NECVCTPYNADFDGDEMNLHLPQTEEAKAEALVLMGTKANLVTPRNGEPLIAAIQDFLTG
AYLLTLKDTFFDRAKACQIIASILVGKDEKIKVRLPPPAILKPVALWTGKQVFSLILKPS
DDCPVKANLRTKGKQYCGKGEDLCYNDSYVTIQNSELMSGSMDKGTLGSGSKNNIFYILL
RDWGQVEAADAMSRLARLAPVYLCNRGFSIGIGDVTPGQGLLKAKYELLNAGYKKCDEYI
EALNTGKLQQQPGCTAEETLEALILKELSVIRDHAGSACLRELDKSNSPLIMALCGSKGS
FINISQMIACVGQQAISGSRVPDGFENRSLPHFEKHSKLPAAKGFVANSFYSGLTPTEFF
FHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDIIQFIYGGDGLD
PAAMEGKDEPLEFKRVLDNIRAVYPCRSEPALSKNELVLTSESIMKKNEFLCCRDSFLQE
IKKFIKGVSEKIKKTRDKYGINDNGTTEPRVLYQLDRITPTQLEKFLETCRDKYMRAQME
PGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEIINASKAISTPIITAQ
LDKDDDPDFARLVKGRIEKTLLGEISEYIEEVFLPDDCFILVKLSLERIRLLRLEVNAET
VRYSICISKLRVKPGDVAVHGEAVVCVTPRENSKSSMYYVLQSLKEELPKVVVQGIPEVS
RAVIHIDEQSGKEKYKLLVEGDNLRAVMATHGVKGTKTSSNNTYEVEKTLGIEAARTTII
NEIQYTMVNHGMSIDRRHVMLLSDLMTYKGEVLGITRFGLAKMKESVLMLASFEKTADHL
FDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHKADKESAPPRRPLIFDNNEFHIPI
VT
NT seq
4149 nt
NT seq
+upstream
nt +downstream
nt
atgtgcaatttcccttctagaagccacatctgttttgggatgaaatctccggaggagatg
cgtcagcaagctcacattcaagtggtcagcaaaaacttgtacagtcaggacaaccaccac
tctccgctgcagtacggagtgctcgaccatcgcatgggaaccagtgaaaaagaccgtccc
tgtgaaacctgtggaaaaaatctagcggattgtttaggacattatggctacattgaccta
gagctgccctgttttcacgttggatacttcaaagctgtgataggcatcttacagatgatc
tgcaaaacctgttgccgtatcttgctgtcagtggaagaaaaaaaacaatttttggattac
ctgaagcgacctggccttacctatcttcagaagagagggctgaaaaagaaagtgtctgaa
aagtgccgaaagaaaaacacttgcccttactgtggtgcctttaatggaactgtgaagaag
tgtggtttgttgaaaataatacatgaaaagtacaaaaccaataagaaagtggtagatccg
atagtatctactttcctccagtcctttgaaaccgccatagaacataacaaagaagtagaa
cccttactgggaagagcgcaggaaaacttaaaccctttggtagtgttgaacctcttcaaa
agaatcccagcggaagatatccctctgcttctaatgaacccagaagcaggtaaaccttca
gatttgattctcacgcggctcttagtgcctccactgtgcatcagaccctctgtggtgagt
gacttgaagtctggcaccaacgaagacgatttaacgatgaagctgacggagataattttc
ctcaacgatgtaataaaaaagcataggatatcaggagccaaaacacagatgattatggag
gactgggactttcttcagctgcagtgtgccctgtacattaacagtgagctctcgggaatt
cctctcaacatggcacctaaaaagtggaccagaggttttgttcagagactgaagggaaag
caaggtcggtttagaggcaatctgtctggaaagcgagtggatttctctggcagaacagtc
atttcacctgatcccaacttaagaatagatgaagtagcagtgcctattcatgttgctaaa
atactaacttttcccgagaaggtgaacaaagcaaatattaatttcatgaggaaacttgtc
cgtaatggccctgatcttcatcccggagccaacttcatacagcaaaggcacacacagatg
aaaaggtttttgaaatatggaaaccgagaaaagatggcccaggagctgaagtttggtgat
accgtggagcgacatcttatagatggtgacatagttctgttcaatcgacagccctctctt
cataagctgagcatcatggctcacattgctagagtaaaacctcacaggacattcagattt
aatgaatgtgtctgtacaccatacaacgcagactttgatggagatgagatgaaccttcac
cttcctcagacagaagaagcaaaagcagaagcgcttgttttaatggggactaaagcgaac
ttggtaacaccaagaaatggagaacctcttatcgctgctattcaagatttcctcacaggt
gcctatcttcttaccttaaaagataccttttttgatcgagccaaagcctgtcaaattatt
gcttctatcctggttggcaaagatgaaaagattaaagttcgtcttccacctccagcaatt
ctgaagcctgtagcactctggacaggcaaacaggttttcagcctgattctcaaacccagt
gatgattgtcctgtaaaagccaatctgcgaaccaagggcaaacagtattgtggcaaaggg
gaagacctgtgttacaatgattcttatgtcacaattcaaaacagcgagttaatgagtggc
agtatggacaaaggaaccttaggttcaggctccaagaacaacatcttctacatcttgctg
agagactggggacaggtagaagctgcggatgccatgtcacgactagccagacttgctcct
gtctacctctgtaatcgtggcttttcaattggaattggtgatgtaacccctgggcagggc
ctcctaaaagctaagtatgagctcctgaatgctggctataagaaatgtgatgagtatatt
gaagctctgaacactggcaagctacagcagcagcctggttgtactgcagaagagacacta
gaggctttaatcttgaaagagctctctgttatcagagatcacgctggcagtgcctgtctc
agagaactggacaagagcaacagtcccctgatcatggcgctctgtggttctaaaggctcc
ttcattaatatatcccagatgattgcttgtgtaggtcagcaggctatcagcggctcccga
gttcctgacggatttgagaacagatccttgcctcactttgagaagcattctaagctccca
gcagcaaaaggctttgtggctaatagcttctattctgggttgactcccactgaatttttt
tttcacaccatggctggtcgcgaaggtctggttgacacagctgtaaaaacagccgaaact
ggatatatgcagaggcggctggtcaaatcacttgaagatctttgctcacagtatgatttg
acagtcagaagttctacgggtgatattatacagtttatttatggaggagacggcttggat
cctgcagccatggaagggaaggatgagccgctggaattcaagcgagttctagacaatatc
agagctgtatatccatgccgaagtgaaccagcccttagtaaaaatgaattggtgttgaca
tctgagtccatcatgaagaagaatgaatttctttgctgccgagacagttttctgcaggaa
attaaaaaattcatcaaaggtgtttctgagaagataaaaaaaactagggacaagtatggc
attaatgacaatggcacaacagagccacgagttttataccagttggataggattactcca
acacaactcgagaagtttctagagacttgcagggacaaatacatgagggcacagatggag
cctggttctgcagtaggagctctttgcgcacagagtattggtgagcctggcactcagatg
actctgaagactttccattttgctggcgttgcttcaatgaacattactttgggcgtgccg
agaatcaaagaaatcattaatgcttcaaaggctattagcacccctattataacagcacag
ttggacaaagatgacgatcctgattttgcccgtctggttaaaggaagaatcgagaaaact
ttattaggagagatttcagaatatattgaggaagtgtttcttccagatgattgtttcatc
ctagtgaagctgtccttagagcgcattaggctactgagactagaggtgaatgcggagact
gtgcgctactcgatttgcatatcgaaactcagagtaaagcctggggatgttgctgtccac
ggagaagcggttgtatgcgtgacccctcgtgaaaatagcaagagttccatgtattatgta
ttgcagtccctgaaggaagaactgccaaaggtggtagtgcaaggtataccagaggtttct
cgagctgtcattcatattgatgaacaaagtggaaaggagaaatataaacttctagttgaa
ggtgataatctgcgagctgttatggctactcatggagtgaaaggaacaaaaacgtcctct
aacaacacttacgaggtagagaagacactaggaattgaagctgctcggacgaccattatc
aatgagattcagtatacaatggtgaaccatgggatgagcattgacaggagacatgtgatg
ttgctgtctgatctaatgacttacaagggtgaagtgctgggcattactaggtttggactg
gcaaaaatgaaggaaagtgtgttaatgctggcttcttttgaaaagactgctgaccatctc
tttgatgctgcctactttggacagaaggattctgtttgtggtgtttctgagtgcatcatc
atgggaatcccgatgaatattggaacgggactttttaaactgttacacaaagcagacaaa
gaatcagcccctcctaggaggcctctgatatttgataataatgaatttcatattcccatt
gttacgtag
DBGET
integrated database retrieval system
