Opisthocomus hoazin (hoatzin): 104334351
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Entry
104334351 CDS
T08436
Symbol
POLR1B
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
oha
Opisthocomus hoazin (hoatzin)
Pathway
oha03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
104334351 (POLR1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oha03021
]
104334351 (POLR1B)
Enzymes [BR:
oha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
104334351 (POLR1B)
Transcription machinery [BR:
oha03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
104334351 (POLR1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
PBP_GOBP
Motif
Other DBs
NCBI-GeneID:
104334351
NCBI-ProteinID:
XP_009938259
LinkDB
All DBs
Position
Unknown
AA seq
1011 aa
AA seq
DB search
MPQGTIKQPLGYIPIMVKSKLCNLYNLSPQELIQHHEEEEEMGGYFIINGLEKVIRMLIM
PRRNFPLAMTRHKWKNRGPGFTEYGVVMHCVKDEHTAINMNLHYLENGCIMVNFIFQKEL
FFLPLGFALKALVNFPDYQIFEELVKGKESDTFYVNCVTEMMRAVVDAGCFTQQNVLEYL
GKSFRIKLNLPEWYSNEQAADFILNKCICIHLTNRTEKFYLLCMMTRKLYAFAKGECMED
NPDSLMNQEVLTPGQLFLMFLKERLESWLQSVKFVLEKRTEKADISINADSLVKAFSLAT
DFTKPFEYLLATGNLRSKTGLGMLQDSGLCVVGDKLNFIRYLSHFRCIHRGAAFSQMRTT
TVRKLLPESWGFLCPVDTPDGEPCGLMNHMTAVCEIVTEMVPVTDIPPLLCSLGVTPVDA
TPSKPYTECYRVVLDGSVVGWVEWELAPEIAETLRRFKITQEKRFPARAEVVLIQMTGKP
SLYPGLFIFTTPCRMVRPVRNLFYGKNEWIGTLEQIFMNVASLESEVVPGVTTHQELFPH
SILSVVANLIPFSDHNQSPRNMYQCQMGKQTMGFPVYNYKDRSDNKLYHLHTPQSPLVRP
SMYDYYGMDSYPIGTNSIVAVISYSGYDMEDAMIVNKSSWQRGFAYGSVIKMESIDLSLK
ASRAGDNLVFGIKPGDPNITEKLDADGLPFVGSVLQPGDPFYSFVNLSTGENFTMYYPNK
EVGIVDNVRLCSNDRGTGKFKKACITVRVPRNPTVGDKFASRHGQKGILSQLWPVEDMPF
TENGMVPDILFNPHGFPSRMTIGMLIESMAGKSAALHGVSYDATPFTFTEKNSALKYFGE
TLVSAGYNFFGTEKMYSGISGLELEAEIFVGVVYYQRLRHMVSDKFQVRTTGPRDTVTNQ
PVKGRNVEGGIRFGEMERDALLAHGTSFLLQDRLFNCSDGSIAYVCMSCGSMTSPVLEKP
PHSSSVTSSRRYSCSVCGEVDMIEAVPVPHVFRYFVAELAAMNIKTKLKVE
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgccgcaggggactattaaacagcccctgggctatattccaatcatggtgaagtccaag
ttgtgcaacctttataatctttctccacaagagctcatacagcaccacgaggaggaagag
gaaatgggaggctactttataattaatggcttagaaaaagttattaggatgctgattatg
cctaggcgaaatttccctcttgcaatgacaagacataaatggaaaaacagaggccctggt
ttcacagagtacggagtagtgatgcactgtgtgaaggatgagcacactgcgataaatatg
aaccttcactacttggagaatggttgcatcatggtgaatttcatttttcagaaagagttg
ttcttccttcccttgggatttgctctgaaggcattagttaatttcccagactaccagatt
tttgaagagttggtcaaaggaaaggaaagtgacaccttttatgttaactgcgttactgag
atgatgagagcagtagtggatgcaggctgttttacacagcaaaacgtcctcgaatacctg
ggaaagagcttcagaataaaacttaaccttcctgagtggtacagcaatgaacaggctgca
gatttcattttgaacaagtgtatctgcatacacctcacgaacagaactgaaaagttttac
ctgctctgtatgatgacccggaagctgtatgcttttgccaaaggggagtgcatggaggat
aatccagacagtctgatgaatcaagaagtgcttaccccaggacagcttttcctaatgttt
ctaaaggagaggcttgaaagctggttgcaatctgttaagttcgttttggagaaaagaaca
gaaaaggcagatatcagcataaatgcggacagcttggtgaaggcattcagcctggcaaca
gactttaccaagccatttgaatatcttcttgcaactggaaacctgcggtctaaaaccggc
ctgggcatgttgcaggacagcggtctgtgtgtggtgggagacaagctcaatttcattcgc
tacctttcccacttccgctgcatacacagaggggcagcattttcccagatgagaactaca
actgtccgcaagctgctgcccgaatcatgggggttcctgtgccctgtggacaccccagat
ggagaaccctgcggtctgatgaaccacatgacagctgtgtgtgaaatagtgaccgagatg
gtgcccgtgacagacattccacctttgttatgttccctaggtgtcacccctgttgatgcg
actccaagcaagccttacacggagtgttaccgagttgtgttggatggctctgtggtgggc
tgggtggagtgggagctggctcctgagattgcagaaaccctccgccgtttcaagataaca
caagagaagagatttcctgcacgggcagaagtggtccttatccaaatgacaggaaaaccc
agtctgtatcctgggttgttcatttttaccacaccttgccggatggtgcggcctgtcaga
aacctgttctatggaaagaatgaatggattggtactctggaacagatattcatgaatgtg
gcctcgctggagtccgaggtggtgcccggagtgacaactcaccaggagctcttccctcac
agcattctgagcgtggtggccaacctcatccccttctccgaccacaaccaaagtccacga
aacatgtaccagtgccagatgggaaagcaaaccatggggtttccagtttataattacaag
gaccgctcggataacaagctgtaccaccttcacactccccagagccctctggtgcggccc
agcatgtatgactattacggtatggacagctatccgatcggcaccaattccattgtggct
gtcatctcctacagtggctacgacatggaagatgcaatgattgtgaacaaatcatcctgg
cagagagggtttgcctatggtagtgttatcaagatggagagcattgacctttcccttaaa
gccagcagggcaggcgataatttagtatttggcatcaagcctggtgatcccaacattaca
gagaagttggatgccgacgggctgccttttgttggctctgtcctgcagcctggggacccc
ttctacagcttcgtgaacctcagcacaggggagaacttcactatgtactacccgaataag
gaagtcggcattgtggacaacgtcaggttgtgcagtaacgaccgcggcaccgggaaattc
aagaaggcttgcatcaccgtgagggttccccgaaatccaactgtcggagacaaattcgcc
agccgtcatggccagaaaggtatcctgagccagctctggccagttgaggatatgccgttc
acagagaacgggatggttcccgacatcctcttcaaccctcacggctttccctcccgtatg
accatcgggatgttaattgagagcatggcggggaagtcagcagcactgcacggcgtctcc
tacgacgccactcccttcaccttcacagagaagaactccgctttgaaatacttcggcgag
actttagtgagcgcaggttataacttctttgggacggaaaagatgtacagtggcatcagc
ggcctggagctggaggcggagatctttgtgggagtcgtgtactaccagcgcctgcgccac
atggtctcggacaagttccaggtgaggacgacagggccccgagacactgtcaccaaccag
cccgtcaaggggaggaacgtggaaggtgggattcgcttcggcgagatggagcgcgacgct
ttgctggctcacggcacgtctttcttgctgcaagaccgcctgttcaactgctcggacggc
tccatcgcctacgtctgcatgagctgcggtagcatgacctctcccgtgctggagaaaccg
ccgcactcctcctctgtgaccagcagcaggaggtactcctgctccgtctgcggcgaggtg
gacatgatcgaggctgtccctgtgccccacgtcttccgttacttcgtggcggagctggca
gccatgaacataaaaacaaagctcaaggtggagtag
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