Opisthocomus hoazin (hoatzin): 104335520
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Entry
104335520 CDS
T08436
Symbol
CDKAL1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
oha
Opisthocomus hoazin (hoatzin)
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oha03016
]
104335520 (CDKAL1)
Enzymes [BR:
oha01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
104335520 (CDKAL1)
Transfer RNA biogenesis [BR:
oha03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
104335520 (CDKAL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Styelin
TraT
Motif
Other DBs
NCBI-GeneID:
104335520
NCBI-ProteinID:
XP_009939559
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All DBs
Position
Unknown
AA seq
582 aa
AA seq
DB search
MPAACDSVLEDIEDIVSAEDLKPHDRLLARKNVFPKVRKRNSQKNVQADDDPPSDSIIPG
AQKIWIRTWGCSHNNSDGEYMAGQLAAYGYKITDDSAEADLWLLNSCTVKNPAEDHFRNS
IKKAQEGKKKVVLAGCVPQAQPRQDYLKGLSIIGVQQIDRVVEVVEETIKGHSVRLLGQK
KDNGKRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGDLASYPVEELVDRA
IQSFQEGVCEIWLTSEDTGAYGRDIGTDLPTLLWKLVEAIPEGAMLRLGMTNPPYILEHL
EEMAKILNHPRVYAFLHIPVQSASDSVLMDMKREYCVADFKQVVDFLKEKVPGITIATDI
ICGFPGETDEDFQETMKLVEQYKFPSLFINQFYPRPGTPAAKMHQVPAAVKKQRTKDLSQ
LFHSYNPYDHKVGERQRVLVTEESFDSNYYVAHNPFYEQVLVPKDPLLMGKMVEVNIYEA
GKHFMKGQPVSDARVYTASITRPLAKGEVSGLTEEFRRAPRNGTSWKARPSAEVPVEAPR
SSWMALQLPWQQGGGRLKILSVSLALLAVLVMFYYGGMKTEL
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctgcctgtgattcagtgcttgaagatattgaagatattgtgtcagcagaagat
ttgaaaccacacgatcggctgcttgcaagaaaaaatgtttttccaaaagtgcgaaaacgc
aattcacaaaaaaatgtccaggcagatgatgatcccccgagtgacagcattattcctggt
gctcagaaaatctggattcgtacatggggatgttctcacaataattcggatggcgaatat
atggctggacagctggctgcatatggatacaaaattacagacgactctgctgaagcagat
ttatggttgctgaacagctgtacagtaaaaaatcctgctgaggaccacttcagaaactca
atcaagaaagcccaagaagggaagaagaaagtggttctagcaggctgtgtgcctcaagcc
caacctcgtcaggactaccttaaaggcttgagtattataggggttcagcagatagatcgt
gtagtagaagttgtggaggaaactattaaaggtcattctgtgagactgctgggtcagaag
aaggataatggaaaacgtttggggggagcacgactggatttgccaaagattaggaagaat
ccactgatagaaataatttccatcaatacagggtgtctcaatgcatgtacatactgcaag
actaaacatgccagaggagatctagcaagttatccagttgaagaactagtagacagagcc
atacagtcttttcaagagggtgtttgtgagatatggctgaccagtgaagacacaggggct
tatggcagagacattggcacagaccttcctacgcttctgtggaagctggttgaagctatt
cctgagggagctatgctgaggcttggcatgacaaaccctccctatattttagagcatctg
gaggaaatggcaaagattctcaatcacccaagagtatatgcttttctgcacataccagtc
cagtcagcttctgacagtgtgctcatggacatgaagagagaatactgtgtggcggacttc
aaacaagtagtggatttccttaaagaaaaagtgcctggaataacaattgctacagacatc
atctgtggttttccaggagagacggatgaagattttcaagaaacaatgaagcttgtagaa
cagtacaagtttccgagcttgtttattaatcaattttacccacgcccaggaaccccggct
gcaaaaatgcatcaagttccagctgcagtgaaaaaacagagaacaaaggatctgtcccag
ctgtttcattcatacaatccgtatgatcataaggttggtgagaggcagagagttctggta
acagaagaatcctttgattccaattactatgttgctcacaatcctttctatgagcaggtt
cttgtgccaaaggatcctctgttaatgggtaagatggtagaagtgaatatttatgaagct
gggaaacattttatgaaggggcaaccagtgtcagatgccagagtttacactgcatccatc
accagaccgttagcaaaaggagaagtttctggtttaacagaggagttcagacgtgcacca
cggaatggcaccagctggaaagcacgcccttctgctgaggtcccagtggaagcaccgcgc
agctcgtggatggctttgcagctcccatggcaacaaggaggagggagactgaagatactg
tctgtcagcctggctctgctggcagttcttgttatgttttactacggaggaatgaaaaca
gaactgtga
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