KEGG   Oceanobacillus iheyensis: OB2163
Entry
OB2163            CDS       T00093                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
oih  Oceanobacillus iheyensis
Pathway
oih03030  DNA replication
oih03410  Base excision repair
oih03420  Nucleotide excision repair
oih03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:oih00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    OB2163 (polA)
   03410 Base excision repair
    OB2163 (polA)
   03420 Nucleotide excision repair
    OB2163 (polA)
   03440 Homologous recombination
    OB2163 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:oih03032]
    OB2163 (polA)
   03400 DNA repair and recombination proteins [BR:oih03400]
    OB2163 (polA)
Enzymes [BR:oih01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     OB2163 (polA)
DNA replication proteins [BR:oih03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     OB2163 (polA)
DNA repair and recombination proteins [BR:oih03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     OB2163 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     OB2163 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc HHH_2 Phage_cap_E HHH_5 MIER1_3_C HHH XPG_I
Other DBs
NCBI-ProteinID: BAC14119
JAMSTEC: OB2163
UniProt: Q8EPE5
LinkDB
Position
complement(2194854..2197496)
AA seq 880 aa
MSNKLVLIDGNSIIYRAFFALPLLNNDKGVYTNGVYGFTTMLLRILEEEKPTHMLVAFDA
GKTTFRHSTYKEYKGGRQKTPPELSEQFPVLKELLDAFSIKYYQLDQYEADDIIGTLSKQ
ADKKDWEVTVISGDKDLLQLVSEQVTVSVTKKGISDIEKYTPAYMLEKMEITPDQIIHLK
ALMGDSSDNIPGVPGVGEKTATKLLKQYENLENVYEHIDEISGKKLKENLSNHREDAFMS
KELVTINRESPIEITLENLPYQGFQTSSVVQIFKDLGFQSLLSRVSEETEDDAEQPNIEM
ESIEFDVVENVTKDLFTDNDALYIEMLGENYHLIPIEGIAVVNKERASFIPTDIALNSNI
FKAWAEDPQKHKIVFDAKRTKVALLRNNINMQGIIFDSLLASYLLNPAENNHDIPAIANR
KSRSDVQFDEEVFGKGAKQKVPEADVLNEHVVRKTQLLFDLYPEMEEELGNNEQYELLKE
LEMPLALILAEVEHYGVQVDIDKLKDMGEDLKERLSTLEQEVYELAGETFNLNSPKQLGP
ILFEKLGLPVIKKTKTGYSTAADVLEQLENEHDIIPKLLMYRQLGKLQSTYIEGLLKVVR
KDTSRIHTRYNQALTQTGRLSSIEPNLQNIPIRLEEGRKIRQAFVPSKDNWIMFAADYSQ
IELRVLAHIAGDEKLIKAFKEDTDIHTQTAMDVFHVESDEVTSNMRRQAKAVNFGIVYGI
SDYGLSQNLGITRKEAKKFIERYFNSYPGVKTYMDEIVQEAKHKGFVSTIMKRRRYLPDI
TSRNFNMRSFAERTAMNTPIQGSAADIIKKAMIDLDHRLKEENLQANVLLQVHDELILEA
PENEIDKLKEIVPDVMENTVELDVPLKVDYSFGKSWFDAK
NT seq 2643 nt   +upstreamnt  +downstreamnt
atgtcaaataagttagtgctcattgatggaaatagtattatctatcgagcattttttgcg
ctgcctttgttaaataatgataaaggtgtttataccaatggagtatatggatttactaca
atgctattgcgtattttagaagaagagaagccaacacatatgttagtagcttttgatgca
ggtaagacaacatttcgtcattcaacttataaagaatataaaggtggacgtcaaaaaacc
ccacctgagctttcggaacaatttcccgttctcaaagagttactggatgctttctctatt
aaatattatcaacttgatcaatatgaagcggacgatattattggtacgttatccaaacaa
gcagataaaaaagattgggaagttaccgttatttcaggtgataaagatttattgcaactg
gtctctgaacaagtaacggtaagtgtcacaaaaaaaggtattagcgatattgaaaaatat
actccagcctatatgttggaaaaaatggaaataactccagaccagattatccatttaaaa
gcattaatgggtgatagctcagataacattccaggcgttccaggagtaggtgagaaaact
gctacaaaattacttaaacaatatgagaaccttgaaaacgtttatgagcatatagatgaa
atatctggaaagaaattaaaagagaatttatctaatcatcgagaagatgcctttatgagt
aaggagttagtaacgataaatcgtgaatcacctattgagataactcttgaaaacttacct
tatcaaggttttcaaacctcgagtgttgtacaaatatttaaggatcttggtttccagtca
ctactatccagagttagtgaagagacagaagatgacgctgagcaacctaatatagagatg
gagtccattgaatttgatgtggtggagaatgtaacgaaggatttatttacggataatgat
gcgttgtacattgaaatgcttggagaaaattatcatctaattccaattgaaggaatagct
gttgtcaataaagagagggcttcttttatcccaacagatattgcactcaattctaatata
tttaaagcatgggcggaggacccacaaaaacataaaattgtttttgatgcaaagcgaact
aaggttgccttgcttcgtaacaatataaatatgcaaggaattatttttgattcccttctg
gcatcttatctattaaatccggctgagaacaatcatgatataccagcgattgcaaatcgg
aaaagtagatcggatgtgcaatttgacgaagaagtgtttggaaaaggcgcaaaacaaaaa
gttcctgaagcagacgttttgaatgagcatgttgttcgaaaaacacaattattatttgat
ctctatcccgaaatggaagaagaactaggaaataatgaacaatatgagttattaaaagaa
ttagagatgccattagctcttatcttagctgaggtggaacattatggtgttcaagtagat
attgataagttaaaagatatgggtgaggatctaaaagaaaggctaagtacactggagcaa
gaagtttatgaattagccggagagacatttaatttaaattctccaaaacagttggggcca
atcttgtttgaaaaattaggattacctgttattaaaaaaacaaagactggttattctact
gctgcagatgtgttagaacaactcgaaaatgaacatgatataatcccaaaactattaatg
tatcgtcaattaggaaagttgcaatccacttacattgaggggttattaaaggttgtgcgg
aaagatacaagccgaattcatacaagatataaccaagctttaacacaaacaggtaggttg
agttcgattgaaccaaacttacaaaatatacctatccgtttagaagaaggtagaaaaatc
agacaagctttcgtaccatcgaaagataattggattatgtttgctgcagactactctcaa
attgagcttcgtgtattagcgcatattgcaggagacgaaaagttaattaaagcatttaaa
gaagataccgatattcatacccaaacagctatggatgtgtttcatgtagagtcggatgaa
gtaacgtcaaatatgcgaagacaagccaaggcagtaaactttggtattgtttatgggata
agtgattatggtttatcacaaaaccttggtataacgcgcaaggaagcgaaaaaatttatc
gagagatatttcaatagttatcctggtgtaaaaacgtacatggatgaaatcgtgcaagaa
gctaagcataagggatttgtatcaacaatcatgaaacggagaagatacttacccgatatt
acaagtagaaactttaatatgcgtagttttgcagaacgtacagcaatgaacactccaatt
caaggaagtgctgcagatattattaaaaaggctatgattgatcttgatcatcgtttgaaa
gaagaaaatttacaagcaaatgtattactacaagtacacgatgagcttattttagaagca
ccagaaaatgaaattgataaattaaaggaaatagtacccgatgtaatggaaaacacagtg
gaattagatgtacctttaaaggtggactattcatttggaaaaagctggtttgatgctaag
taa

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