Oceanobacillus iheyensis: OB2163
Help
Entry
OB2163 CDS
T00093
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
oih
Oceanobacillus iheyensis
Pathway
oih03030
DNA replication
oih03410
Base excision repair
oih03420
Nucleotide excision repair
oih03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
oih00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OB2163 (polA)
03410 Base excision repair
OB2163 (polA)
03420 Nucleotide excision repair
OB2163 (polA)
03440 Homologous recombination
OB2163 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oih03032
]
OB2163 (polA)
03400 DNA repair and recombination proteins [BR:
oih03400
]
OB2163 (polA)
Enzymes [BR:
oih01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OB2163 (polA)
DNA replication proteins [BR:
oih03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
OB2163 (polA)
DNA repair and recombination proteins [BR:
oih03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
OB2163 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OB2163 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
HHH_2
Phage_cap_E
HHH_5
MIER1_3_C
HHH
XPG_I
Motif
Other DBs
NCBI-ProteinID:
BAC14119
JAMSTEC:
OB2163
UniProt:
Q8EPE5
LinkDB
All DBs
Position
complement(2194854..2197496)
Genome browser
AA seq
880 aa
AA seq
DB search
MSNKLVLIDGNSIIYRAFFALPLLNNDKGVYTNGVYGFTTMLLRILEEEKPTHMLVAFDA
GKTTFRHSTYKEYKGGRQKTPPELSEQFPVLKELLDAFSIKYYQLDQYEADDIIGTLSKQ
ADKKDWEVTVISGDKDLLQLVSEQVTVSVTKKGISDIEKYTPAYMLEKMEITPDQIIHLK
ALMGDSSDNIPGVPGVGEKTATKLLKQYENLENVYEHIDEISGKKLKENLSNHREDAFMS
KELVTINRESPIEITLENLPYQGFQTSSVVQIFKDLGFQSLLSRVSEETEDDAEQPNIEM
ESIEFDVVENVTKDLFTDNDALYIEMLGENYHLIPIEGIAVVNKERASFIPTDIALNSNI
FKAWAEDPQKHKIVFDAKRTKVALLRNNINMQGIIFDSLLASYLLNPAENNHDIPAIANR
KSRSDVQFDEEVFGKGAKQKVPEADVLNEHVVRKTQLLFDLYPEMEEELGNNEQYELLKE
LEMPLALILAEVEHYGVQVDIDKLKDMGEDLKERLSTLEQEVYELAGETFNLNSPKQLGP
ILFEKLGLPVIKKTKTGYSTAADVLEQLENEHDIIPKLLMYRQLGKLQSTYIEGLLKVVR
KDTSRIHTRYNQALTQTGRLSSIEPNLQNIPIRLEEGRKIRQAFVPSKDNWIMFAADYSQ
IELRVLAHIAGDEKLIKAFKEDTDIHTQTAMDVFHVESDEVTSNMRRQAKAVNFGIVYGI
SDYGLSQNLGITRKEAKKFIERYFNSYPGVKTYMDEIVQEAKHKGFVSTIMKRRRYLPDI
TSRNFNMRSFAERTAMNTPIQGSAADIIKKAMIDLDHRLKEENLQANVLLQVHDELILEA
PENEIDKLKEIVPDVMENTVELDVPLKVDYSFGKSWFDAK
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaataagttagtgctcattgatggaaatagtattatctatcgagcattttttgcg
ctgcctttgttaaataatgataaaggtgtttataccaatggagtatatggatttactaca
atgctattgcgtattttagaagaagagaagccaacacatatgttagtagcttttgatgca
ggtaagacaacatttcgtcattcaacttataaagaatataaaggtggacgtcaaaaaacc
ccacctgagctttcggaacaatttcccgttctcaaagagttactggatgctttctctatt
aaatattatcaacttgatcaatatgaagcggacgatattattggtacgttatccaaacaa
gcagataaaaaagattgggaagttaccgttatttcaggtgataaagatttattgcaactg
gtctctgaacaagtaacggtaagtgtcacaaaaaaaggtattagcgatattgaaaaatat
actccagcctatatgttggaaaaaatggaaataactccagaccagattatccatttaaaa
gcattaatgggtgatagctcagataacattccaggcgttccaggagtaggtgagaaaact
gctacaaaattacttaaacaatatgagaaccttgaaaacgtttatgagcatatagatgaa
atatctggaaagaaattaaaagagaatttatctaatcatcgagaagatgcctttatgagt
aaggagttagtaacgataaatcgtgaatcacctattgagataactcttgaaaacttacct
tatcaaggttttcaaacctcgagtgttgtacaaatatttaaggatcttggtttccagtca
ctactatccagagttagtgaagagacagaagatgacgctgagcaacctaatatagagatg
gagtccattgaatttgatgtggtggagaatgtaacgaaggatttatttacggataatgat
gcgttgtacattgaaatgcttggagaaaattatcatctaattccaattgaaggaatagct
gttgtcaataaagagagggcttcttttatcccaacagatattgcactcaattctaatata
tttaaagcatgggcggaggacccacaaaaacataaaattgtttttgatgcaaagcgaact
aaggttgccttgcttcgtaacaatataaatatgcaaggaattatttttgattcccttctg
gcatcttatctattaaatccggctgagaacaatcatgatataccagcgattgcaaatcgg
aaaagtagatcggatgtgcaatttgacgaagaagtgtttggaaaaggcgcaaaacaaaaa
gttcctgaagcagacgttttgaatgagcatgttgttcgaaaaacacaattattatttgat
ctctatcccgaaatggaagaagaactaggaaataatgaacaatatgagttattaaaagaa
ttagagatgccattagctcttatcttagctgaggtggaacattatggtgttcaagtagat
attgataagttaaaagatatgggtgaggatctaaaagaaaggctaagtacactggagcaa
gaagtttatgaattagccggagagacatttaatttaaattctccaaaacagttggggcca
atcttgtttgaaaaattaggattacctgttattaaaaaaacaaagactggttattctact
gctgcagatgtgttagaacaactcgaaaatgaacatgatataatcccaaaactattaatg
tatcgtcaattaggaaagttgcaatccacttacattgaggggttattaaaggttgtgcgg
aaagatacaagccgaattcatacaagatataaccaagctttaacacaaacaggtaggttg
agttcgattgaaccaaacttacaaaatatacctatccgtttagaagaaggtagaaaaatc
agacaagctttcgtaccatcgaaagataattggattatgtttgctgcagactactctcaa
attgagcttcgtgtattagcgcatattgcaggagacgaaaagttaattaaagcatttaaa
gaagataccgatattcatacccaaacagctatggatgtgtttcatgtagagtcggatgaa
gtaacgtcaaatatgcgaagacaagccaaggcagtaaactttggtattgtttatgggata
agtgattatggtttatcacaaaaccttggtataacgcgcaaggaagcgaaaaaatttatc
gagagatatttcaatagttatcctggtgtaaaaacgtacatggatgaaatcgtgcaagaa
gctaagcataagggatttgtatcaacaatcatgaaacggagaagatacttacccgatatt
acaagtagaaactttaatatgcgtagttttgcagaacgtacagcaatgaacactccaatt
caaggaagtgctgcagatattattaaaaaggctatgattgatcttgatcatcgtttgaaa
gaagaaaatttacaagcaaatgtattactacaagtacacgatgagcttattttagaagca
ccagaaaatgaaattgataaattaaaggaaatagtacccgatgtaatggaaaacacagtg
gaattagatgtacctttaaaggtggactattcatttggaaaaagctggtttgatgctaag
taa
DBGET
integrated database retrieval system