Oceanobacillus iheyensis: OB3008
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Entry
OB3008 CDS
T00093
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase delta chain
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
oih
Oceanobacillus iheyensis
Pathway
oih03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
oih00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
OB3008 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oih03021
]
OB3008 (rpoE)
03400 DNA repair and recombination proteins [BR:
oih03400
]
OB3008 (rpoE)
Transcription machinery [BR:
oih03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
OB3008 (rpoE)
DNA repair and recombination proteins [BR:
oih03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
OB3008 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
BUD22
Motif
Other DBs
NCBI-ProteinID:
BAC14964
JAMSTEC:
OB3008
UniProt:
Q8EM52
LinkDB
All DBs
Position
complement(3117330..3117851)
Genome browser
AA seq
173 aa
AA seq
DB search
MSLQQLTHDEIDHLSMIELGVKILKEENKAMNYKVIFNKIAELKDFTDEQKQNMMAQFYT
DMNVDGRFLTLGSGMWGLKRWYPVEQAEEEITEEPKKKTKKKKKKAEVIDDVDDDLDVTD
DEIDDIVSDLGDDLDDDDFEDDLDEDLEDLEDEVDELEADEDVEDENDDDNTR
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
gtgagtttgcaacaattaacccatgatgagattgaccatttatccatgattgagctagga
gtaaaaattcttaaagaagaaaacaaagcaatgaattataaggtaatattcaataagatt
gctgagttgaaagattttaccgatgagcaaaaacaaaatatgatggcacaattctatacg
gatatgaatgtggatggtcgttttcttacattaggttctggtatgtggggattgaaacga
tggtatccggtagaacaagcagaggaagaaattacggaagaaccgaagaaaaaaacgaag
aagaaaaagaagaaagcagaagtcattgatgacgtggatgatgacctggatgtaacagat
gatgaaatcgatgatattgttagcgatctaggtgatgatttagatgatgacgattttgaa
gatgatttagatgaagatttagaggatcttgaagatgaagtcgatgagcttgaagcggat
gaagatgtagaagatgaaaacgatgatgacaatactcgttaa
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