Oncorhynchus keta (chum salmon): 118358163
Help
Entry
118358163 CDS
T09424
Name
(RefSeq) neurogenic locus notch homolog protein 1-like isoform X1
KO
K02599
Notch 1
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
118358163
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_CA
Ank_2
EGF_2
Ank
Notch
NOD
NODP
Ank_3
Ank_5
Ank_4
DL-JAG_EGF-like
EGF_3
Motif
Other DBs
NCBI-GeneID:
118358163
NCBI-ProteinID:
XP_035591561
EnsemblRapid:
ENSOKEG00005053379
LinkDB
All DBs
Position
25:11192152..11238197
Genome browser
AA seq
2524 aa
AA seq
DB search
MHHFFVKLTFLLSLIALTRGLRCSMSTESCLNLGRCEATADGNGECKCRDGHVGNRCQHQ
DPCTYSSCKNGGSCRMVPRGNSVEFTCFCRPGFTDRLCLTPIDNACLSLPCRNGGTCDLV
NLKEYKCRCPPGWSGKQCQQADPCASNPCANGGQCTPFESHYICSCTPFFYGQTCKQDVN
ECAQNPSPCKNGGVCVNEVGTYRCQCPQEYTGKHCDTRYLPCNPSPCHNGATCVQKGDTT
YECSCVPGFSGQNCDTNIDDCPRHECQNGGTCVDGVNTYNCQCKPEFTGQFCTEDVDECQ
LMPNACQNGGTCHNIYGAYQCVCVNGWTGDDCGENIDDCANAACYQGAVCHDRVASFFCE
CPHGRTGLLCHLDDACISNPCQKGSNCDTNPVNGKAICTCPLGYFGAACDQDVDECSLGG
NPCEHGGKCLNTKGSFQCKCQPGFSGARCEHDINECLSNPCQNEATCLDQIGGFHCICMP
GYEGLFCQINTDECANNPCLNNGKCIDKINTFHCQCPTGFAGNLCQIDIDECASTPCKNG
AKCTDGPNKYTCDCTEGYTGQHCETDINECFSAPCHYGTCKDGLASFTCYCRPGYTGRLC
ETNINECLSQPCRNGGICQDRENSYICTCPKGTTGINCEVNLDDCKSKPCDYGTCLDKIN
GYECACEPGYSGTMCNINIDECDLNPCHNGGTCIDGINSFTCLCPEGYHDTTCFYQVNEC
LSNPCIHGHCQDKVNGYNCLCDNGWSGKNCDINNNECESNPCMNGGTCKDMTSGYVCSCR
VGFTGPSCQTNINECASNPCLNQGTCIDDVAGYKCNCLLPYTGENCETLLAPCSTKPCKN
AGVCQESEDYENFSCVCPEGWQGQTCEVDINECVKNPCLNGATCENTKGNYRCGCKAGYA
GRNCETNIDDCKPNPCSNGGFCRDEVDNFVCTCLPGFRGTKCEEDINECDSNPCKNGANC
TDCVNSYTCTCPSGFSGIHCENNTPDCTESSCFNGGTCLDGINTYTCLCPPGFTGSYCQH
DINECDSRPCLNGGTCQDSYGTYKCTCPQGYTGLNCQNLVRWCDSSPCKNGGTCWQTGTT
YSCECQTGWTGLYCDVPSVSCEVAAKQRGVEVVALCRNSGQCLDAGNTHYCHCQAGYTGS
YCEEQVDECTPNPCQNGATCTDFLGGYSCKCVAGYVGTNCSNEINECFSQPCQNGGTCID
LINTYKCSCPRGTQGVHCEINIDDCNPFTDQVTNEPKCFNKGKCVDRVGGYHCICPAGYV
GERCEGDVNECLSNPCDPRGTHNCVQLTNNYRCDCRTGYTGEHCDTVFDGCKGKPCRNGG
TCAVASNTPHGFICKCPPGYTGSTCEYDAHSCGNLHCRNGGTCVSGHKNPKCLCTSSFTG
PECEYPTDNPCNTNLCYNGGTCEYSPEAPYYHCVCPTNFNGLLCHILDYSFLGGFGRDIT
PPPEVEVSCEIPQCEETKGNKFCDMLCNNHACGWDGGDCSLNFNDPWKNCTSSLQCWRYF
NDGKCDEQCNNAGCLYDGFDCQNLEGQCNPLYDQYCKDHYADGHCDQGCNNAECEWDGLD
CANNMPEKLAVGRLVIVVHIMPDQLRNNSLGFLRELSRVIHTNVVFQQDAKGQTMIYPYY
GSEQELKKHNTKRSVGWTEIPDTVLSSMKNSMYTIANGSRRRRRELDPMQIKGSIVYLEI
DNRQCVQQSTECFQSATDVAAFLGALASSGNLNVPYIIEAVHSEVDPQLPSELYPIYVVL
AGLALLAFAGVGMVASRKRRREHGQLWLPEGFKTSEPNKKKRREPVGEDSVGLKPLKNSL
DISLMDNNQNEWGEEEPSDAKRFRQFEEQAMLDLDDQTDHRQWTQQHLDAADLRIPSIAP
TPPQGEIENDCMDVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDTSANVINDFIYQGAK
LHSQTDRTGETALHLAARYARSDAAKRLLEASADANIQDNMGKTPLHAAVAADAQGVFQI
LIRNRATDLDARMHDGTTPLILAARLAVEGMVEELINCHADVNAIDDFGKSALHWAAAVN
NVEAAIVLLKNGANKDMQNNKEETPLFLAAREGSYETAKVLLEHFANREITDHMDRLPRD
IAQERMHHDIVRLMDEYNLVRSAPVHSHGHGGSMGTTLSPPLCSPNGYLGSMKVQGKKAR
KPSAKGIGCKDGKDMKNKKKASQDGKGGSVLDSSAVLSPVDSLESPHGYISDVASPPMMT
SPFQQSPSMSLNHLQGMSDPHMGVNHMGIPNKQELAHMQFDPLPPRLTHLPVSGSNGSGG
MNGQCDWLSRMHASMGQPSQFNPMRVGPVGGQGGLHQGGGQQGMMTSLHNGLPTTSLSQM
MSYQGLQNTRLASQPHLLQQAQQQMQQQMQHQQNLQQQLQQQQQQSIQLQHQNSNTGTSG
HSISQNFISSELSGSELQQGTGNQGSMPIHTILPQETQIMSQNLPSTQYLTPPSQHSYSG
PMDNTPNHQLQVPDHPFLTPSPGSPDQWSSSSPHSNMSDWSEGISSPPTSSMQSQIGHIP
DQFK
NT seq
7575 nt
NT seq
+upstream
nt +downstream
nt
atgcatcatttctttgtgaaactaactttcctgttgtcgcttattgctctaacacgaggc
ctaagatgctctatgtccaccgagtcgtgtttgaacctggggaggtgtgaggccacggct
gacggaaatggagagtgcaaatgtcgggatggacacgtggggaacaggtgtcagcatcag
gacccctgcacctactcttcatgtaaaaatggcggctcgtgtcgcatggtgccccgtggg
aattcagtggaattcacgtgtttctgccggccaggcttcacggaccgcctatgtctgacg
cccatcgacaacgcctgtctcagtttaccctgccggaacggtggcacttgcgacctggtc
aacctcaaagagtacaagtgcagatgtcctcctggctggtctggtaagcagtgccagcag
gcagacccctgtgcctctaacccctgtgccaacggcgggcagtgcacccccttcgagtcc
cactacatctgctcctgcacccccttcttctacggccagacctgcaagcaggacgtcaat
gagtgtgcccaaaacccctcaccctgcaagaatggaggcgtgtgtgtgaacgaggtgggc
acctaccgctgccagtgtccccaggagtatacgggcaagcactgcgatacccgctaccta
ccgtgcaacccctccccctgccacaacggggccacctgcgtccagaagggagacaccacc
tacgaatgctcctgtgtgccaggcttctcaggtcagaactgtgacaccaacattgatgac
tgtccaagacacgagtgtcagaatggaggaacctgtgtggacggagttaacacctataac
tgccaatgcaaacctgaattcacaggccagttctgtacagaggacgttgacgagtgccaa
ctgatgcccaacgcgtgccagaacggtggaacgtgccacaacatctacggtgcctaccag
tgtgtgtgtgtcaacgggtggacgggggatgactgtggagagaatattgacgactgcgcc
aatgcggcctgctatcaaggggccgtctgccacgaccgtgtggcgtccttcttttgcgag
tgtccccatggtcgcaccggtctgctgtgtcacctggatgacgcctgtatcagtaacccc
tgtcagaaaggctccaactgtgacaccaaccccgtcaacggcaaggccatctgcacctgt
cccctgggctactttggcgccgcctgtgaccaggatgttgacgagtgctcgctgggtggt
aacccctgtgagcacggagggaagtgcctgaacaccaagggatcgttccagtgtaagtgt
cagcccggcttctctggagctcgctgtgaacacgacatcaacgagtgcctctccaacccc
tgccagaacgaagccacctgcctcgaccagataggaggcttccactgcatctgtatgcca
ggctacgagggactgttctgccagatcaatacggacgagtgcgccaacaacccctgccta
aacaatgggaagtgtatcgacaagatcaacaccttccactgccagtgccccacaggcttt
gctgggaatctctgccagatcgacattgacgagtgcgccagcacgccttgcaagaatggc
gccaagtgcacggacggccccaacaagtacacctgtgattgcactgaaggttacacaggg
caacactgtgagactgacatcaatgagtgtttctcagccccctgtcactatggtacctgt
aaagacggcctggcctccttcacctgttactgtcgccctggttacacgggccggttgtgc
gagaccaacattaatgagtgtctgagtcagccctgtcggaacggaggcatctgccaggac
cgcgagaactcctatatctgcacctgccccaagggcaccacaggtataaactgtgaagtc
aacctggatgactgcaagagcaagccatgtgactacgggacatgcctcgacaagatcaac
ggctacgagtgtgcctgtgagcccggctacagtgggaccatgtgcaacatcaacattgat
gagtgtgacctcaacccgtgtcacaatggtggcacctgcatcgatggcatcaacagcttc
acctgtttgtgcccggagggttaccatgacaccacctgcttctaccaggtcaacgagtgc
cttagcaacccctgtatccatggccactgtcaagacaaggtcaacggttacaactgtctg
tgtgacaatggctggagtggcaagaactgtgacatcaacaacaacgagtgcgagtccaac
ccctgcatgaacggaggcacctgcaaggatatgaccagcggatacgtctgctcatgtaga
gtgggcttcacgggtccaagttgtcagacgaacatcaacgaatgtgcctccaatccctgt
ctgaaccaagggacctgcatcgatgatgtcgctggctacaagtgcaactgcctactccca
tataccggtgagaactgtgagaccctgctggcaccctgcagcaccaaaccctgcaagaac
gcaggtgtgtgtcaggagtctgaggactacgagaacttctcctgtgtgtgtccagagggc
tggcaaggccagacctgtgaggtggacattaacgagtgtgtgaagaacccctgtctcaat
ggggccacctgcgagaacaccaaaggcaactaccgctgtggctgcaaggccggctatgct
ggccgcaactgcgagaccaacattgacgactgcaagcccaacccctgcagcaatggaggt
ttctgccgggacgaagtggacaactttgtgtgcacctgcctgcctggtttccgtggcact
aagtgtgaggaggacatcaatgagtgcgacagtaacccatgtaagaatggagccaactgt
acagactgtgtcaacagctacacctgcacctgtccctctggcttcagtgggatacactgt
gagaacaacacacctgactgcactgagagctcttgtttcaacggtgggacgtgtctggac
ggcatcaacacctacacctgcctgtgcccacctggcttcactggcagctactgccaacac
gacatcaacgagtgtgactccaggccctgcctgaacggaggcacctgccaggacagctat
ggcacctacaagtgtacatgtccccagggctacactggactcaactgccagaatctggta
cgctggtgtgactcgtctccctgtaagaatgggggcacctgttggcagactggcaccact
tacagctgtgagtgccagaccggctggacagggctctactgcgatgtgccaagcgtctcc
tgcgaggtggctgccaaacaaagaggtgtggaggtagttgctctgtgtcgtaactcaggc
cagtgtctggacgcagggaacacccactactgccactgccaggcgggttacaccggcagc
tactgtgaggagcaggtggatgagtgcacccccaacccctgtcagaacggagccacctgc
actgacttcctaggagggtactcctgcaagtgcgttgcaggatacgtcgggacgaattgc
tccaacgagatcaatgagtgtttctcccagccgtgccagaacgggggcacctgcattgac
ctgatcaatacctacaaatgctcctgtcccaggggaacccaaggcgttcactgtgagatc
aacatagacgactgcaaccccttcacagaccaagtcaccaacgagcccaagtgcttcaac
aaggggaagtgtgttgacagggtgggaggttaccactgtatctgtcccgccggctacgta
ggggagcgctgtgagggggacgtcaacgagtgcctgtccaacccatgtgacccccgcggg
acacacaactgcgtccagctcaccaacaactaccgctgtgattgccgtactggatacaca
ggagagcattgtgacacggtgtttgacggctgtaagggcaaaccctgtcgtaacggaggg
acatgtgccgtagccagcaacactcctcacggcttcatctgcaagtgtccacctggctac
actggctccacctgtgagtacgatgcccactcctgtggcaatcttcactgtcgtaacggt
ggcacctgcgtctccggacacaagaacccaaagtgtctctgtacctcctcgttcacgggg
ccagagtgtgaataccccacagacaacccttgtaacaccaacctttgctacaacggggga
acctgtgagtacagcccagaggctccgtactaccactgcgtctgccccaccaacttcaac
ggcctgctatgtcacatcctggactacagcttcctgggcgggttcggccgtgacatcacc
cccccgccggaggtggaggtgagctgtgagatcccccagtgtgaggaaacgaaggggaac
aagttctgtgatatgttgtgtaacaaccacgcgtgtggctgggacgggggcgactgctcg
ctcaacttcaacgacccgtggaagaactgcacgtcgtccctgcagtgctggcgctacttc
aacgacgggaagtgtgacgagcagtgcaacaacgccgggtgtctctacgacggctttgac
tgtcagaacctggagggccagtgcaatcctctgtacgaccagtactgtaaagaccactat
gcggacggccactgtgaccagggctgcaacaatgcagagtgtgagtgggacggtctggac
tgtgccaacaacatgccagagaagctggcggtgggccgcctggtcatcgtggttcacatc
atgcccgaccagctccggaacaactcgcttggcttcctgcgcgagctgagccgcgtgatc
cacaccaatgtggtgttccagcaggacgctaagggacagacgatgatctacccgtactac
ggcagtgagcaggagctgaagaaacacaacacgaagcgctcagtgggctggacagagatc
cctgacactgttctcagctccatgaagaacagcatgtatactatagccaatggaagcagg
cgcagacgcagggagctggaccccatgcagatcaaaggctccatagtgtacctggagatt
gacaaccgccagtgcgtccagcagtccacggagtgcttccagagtgccactgacgtagca
gccttcctaggggccctggcctccagtgggaacctcaacgttccctacatcatagaggcg
gttcacagtgaggttgacccccagcttccgtcggagctctatcccatctacgtggtccta
gccggactggctctcctggccttcgcaggcgtggggatggtcgcctcacggaagcgtcgt
cgcgagcacggccaattgtggttgccggagggcttcaagaccagtgagcccaacaagaag
aagaggagggagcccgtcggggaggattcggtgggattgaagccactgaaaaattccttg
gacatatcactgatggacaacaaccagaatgaatggggagaagaggagccttcagacgcc
aagcgctttaggcagtttgaggagcaggcgatgctggacctggacgaccagacggaccac
cgccagtggacccagcagcacctggacgcggctgatctccgaatcccctccatcgccccc
acaccacctcagggggagatcgagaacgactgcatggacgtcaacgtacggggaccagat
ggcttcacccccctgatgatcgcctcctgcagtggtggaggtctggaaaccggcaacagc
gaggaggaggaagacacctctgccaacgtgatcaatgatttcatctaccagggtgccaaa
ctccacagtcagacggaccgcacgggggagaccgccctccatctcgctgcccgctacgcc
cgctccgacgctgccaagcgtctgctggaggccagtgcagatgccaacatccaggacaac
atgggcaagaccccgctacatgctgccgtggctgccgacgctcagggagtcttccagatt
ttgatcaggaatcgtgccacagacctggatgcccgcatgcacgatggcaccacccctctg
atcctggcagcccgcctggcagtggagggcatggtggaggagctcattaactgccacgct
gacgtcaacgctatcgatgacttcggcaaatctgctctgcactgggcagcagcagtgaac
aacgtggaagcagctatcgtactactgaagaacggcgccaacaaggacatgcagaacaac
aaggaggagaccccgctgttccttgctgccagggaaggaagctacgagaccgccaaggtt
ctgctggagcactttgctaaccgcgagataactgatcacatggaccggctgccccgagac
attgcgcaagagaggatgcaccacgacattgtccgtctcatggatgagtacaacctggtc
cgcagtgcacccgtgcacagccatggccatggaggctccatgggcacgaccttgtccccc
cccctctgctcccccaatggctacctgggcagcatgaaggtccagggcaagaaggcccgc
aagcccagcgccaagggcatcggctgcaaggacggcaaggacatgaagaacaagaagaaa
gcctcccaggatgggaagggagggagtgtgctggatagctcagctgttctgtccccggtg
gactccctggagtctccacacggttatatctctgacgtggcgtctcctcccatgatgacg
tcccccttccagcagtcaccgtccatgtcgctcaaccacctccaggggatgtccgacccc
cacatgggggtcaaccacatgggcatacccaacaagcaggagctggcacacatgcagttc
gacccactcccgccccgtctcacccaccttcctgtgtcaggctccaacggctcggggggc
atgaatggccagtgtgattggctctccaggatgcacgccagcatgggtcagcccagccag
ttcaatcccatgagggttggtcctgtcggtgggcagggcggtctgcaccaggggggcggg
cagcaaggcatgatgacctctctccacaacgggctccccaccaccagcctgtcccagatg
atgagctaccagggcctgcagaacacccggctggcctcgcagccccaccttctgcagcag
gcccagcagcagatgcagcagcagatgcagcaccaacagaacctgcagcagcagctccag
cagcagcagcaacagagcatccagctgcagcaccagaactctaacactggcactagtggc
cattccatcagccagaacttcatcagcagcgagctgagtggctcagagctccagcagggc
acaggaaaccagggctccatgcctatccacaccatcctaccccaggagacccagatcatg
agccagaacctgcccagcacccagtacctcacccctccctcccagcacagctactccggc
cccatggacaacaccccgaaccaccagctacaggtcccggaccacccctttctaaccccc
tcccccgggtctcccgaccaatggtctagctcctccccgcattctaacatgtccgactgg
tcagagggcatctcgagtcctccaaccagcagcatgcagtctcagatcggacatatccct
gaccagttcaagtag
DBGET
integrated database retrieval system
