Oncorhynchus keta (chum salmon): 118358321
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Entry
118358321 CDS
T09424
Symbol
si:dkey-32e23.4
Name
(RefSeq) dynamin-1-like protein isoform X1
KO
K17065
dynamin 1-like protein [EC:
3.6.5.5
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04217
Necroptosis
oke04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
118358321 (si:dkey-32e23.4)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
118358321 (si:dkey-32e23.4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118358321 (si:dkey-32e23.4)
03029 Mitochondrial biogenesis [BR:
oke03029
]
118358321 (si:dkey-32e23.4)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oke04147
]
118358321 (si:dkey-32e23.4)
Enzymes [BR:
oke01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.5 dynamin GTPase
118358321 (si:dkey-32e23.4)
Membrane trafficking [BR:
oke04131
]
Endocytosis
Clathrin-mediated endocytosis
Dynamin
118358321 (si:dkey-32e23.4)
Lipid raft mediated endocytosis
Caveolin-mediated endocytosis
118358321 (si:dkey-32e23.4)
RhoA-dependent endocytosis
118358321 (si:dkey-32e23.4)
Mitochondrial biogenesis [BR:
oke03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Fission and Fusion factors
118358321 (si:dkey-32e23.4)
Retention of mitochondria
118358321 (si:dkey-32e23.4)
Exosome [BR:
oke04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
118358321 (si:dkey-32e23.4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynamin_M
Dynamin_N
GED
MMR_HSR1
T3SS_needle_E
Rrn7_cyclin_N
Motif
Other DBs
NCBI-GeneID:
118358321
NCBI-ProteinID:
XP_035591884
EnsemblRapid:
ENSOKEG00005042833
LinkDB
All DBs
Position
25:17428836..17445265
Genome browser
AA seq
671 aa
AA seq
DB search
METLIPIINRLQEVFLTVGAEIIQLPQIVVVGSQSSGKSSVLESLVGRDFLPRGSGIVTR
RPLVLQLVNVPPLAERRLQENGNGVKQNANSYPGIKADEWGTFLHSKNQIFTDFLEIRKE
IEEETERSSGGNKGISPEPIYLKIFSPHVLNLTLVDLPGITKVPVGDQPEDIEAQVQEMI
LSFISNPNSLILSVSPANSDLATSDALKLAREVDQDGRRTLLVVSKLDLMDAGTDALEVL
LGRVIPVRLGIVGVVNRSQHDINTQKSIEDTSRDEQAFLQRHYPSLASRCGSRYLARTLS
RLLMHHIRDCLPELKRRVTVLSAQYQARLSSYGQPVEDHSSTLLQIVTKFASDYCNTIEG
TATHIQTSELCGGARICYIFHETFGRTLQSIDPLGGLTELDILTAIRNATGPRPALFVPE
ISFELLVKRQIKRLEEPSLRCVELVHEELQRIIQHCSSYSTQELLRFPKLHDSIVEVVTS
LLRKRLPITNDMVHNLVQIELAYINTKHPDFTDAAQVSASVNSQQGLQDGDKCWMNEKVA
EEKVPVTGFSSPVKGQAINLLDTAVPVSRKLSAREQRDCEVIQRLIKCYFLIVRKSIQDS
VPKTVMHFLVNFVKERLQSELVGQLYKQNLLQGLLIESQDTAQQRTEVAQMLEALQKASN
IISEIRETHLW
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggagactctaattcccatcatcaatcggctccaggaagtcttcctgacagtgggggca
gagatcatccagctgcctcagatagtagtggttggctcacagagcagcggcaagagttct
gtgttggagagcctggttgggagggattttctgcctcggggatcaggcatagtcacacgg
cgacccctagtgttgcagctggtgaatgtgcctccattggcagagaggagactgcaagaa
aatggaaatggggtaaaacaaaatgcaaacagctacccagggatcaaggctgatgaatgg
ggcacgttccttcatagcaagaaccagattttcacagatttcttggagattcgcaaggag
attgaagaagagactgagcgtagctcaggaggcaacaagggaatcagccctgagcccatc
tatttgaagattttctctcctcatgtcctcaatctcacactggttgatttgccaggaata
accaaggttccggttggagatcagccagaggacatagaagctcaagtccaagagatgatc
ctatccttcatctccaaccccaactcccttatcctctcagtgtctcctgccaactccgac
ttggccacctctgatgccctcaaactggcccgcgaggtcgaccaggatggccgtagaaca
ctgctggtggtcagtaagctggacctgatggacgcagggacagatgctctggaggtcttg
ctgggccgggtcattccagtgcggctcggaattgtgggagtggtcaacaggagccagcat
gacatcaacacgcagaagagcatagaggacacgtcacgggacgagcaggccttcctccag
cgccactacccgtctctggcctcccgctgcggctcccgctacctggctcgcaccctgagc
cgcctgctcatgcaccacatcagggactgcttgccggagctgaagaggcgtgtgacggtg
ttgagtgcccagtaccaggcccggctcagcagctacggccagcctgtagaggaccacagc
tccaccctgctacagatcgtcaccaagttcgccagcgactattgcaacaccatcgagggc
accgccacgcacatccagacatctgaactctgcgggggggctcggatctgctacatattc
catgagacctttggccgcactcttcagtctattgaccccctggggggcttgacagagctc
gacatcctcactgcaatccgcaatgctacgggtccgcggccggccctctttgtacctgag
atttcctttgagctgctggtgaagaggcagatcaagcgtctggaggagcccagtctgcgc
tgtgtggagctggtccacgaggagctgcagaggatcatccagcattgctcctcctacagc
acgcaggagctccttcggtttcccaagctgcacgactccattgtggaggtggtgactagt
ttactcaggaagcgcttgccaattactaatgacatggtccacaacttggttcaaattgag
cttgcttacatcaacacaaagcacccagactttaccgatgctgctcaggtctcagcatct
gtcaacagtcaacagggcctgcaggatggagataaatgctggatgaatgagaaggtggct
gaggagaaggtaccagtgacaggtttcagcagccctgttaagggccaggccatcaacctc
ctggacacagcggtgccggtgtcccgaaagctgagtgcccgcgagcaaagagactgtgag
gtcattcaacgcctcatcaaatgctacttcctaattgtccgcaagagcattcaggacagt
gttcccaagacggtgatgcacttcctggtgaactttgtgaaggagcgtctgcagagtgag
ctggtgggccagctgtacaaacagaacctgctgcaggggctgctcatcgagtcccaagac
acagcacaacagaggacagaggtggcccagatgctggaggctctccaaaaagccagcaac
atcatctcagagatccgggagacacacctgtggtag
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