Oncorhynchus keta (chum salmon): 118360435
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Entry
118360435 CDS
T09424
Symbol
si:dkey-72l14.3
Name
(RefSeq) glyco_hydro_56 domain-containing protein
KO
K01197
hyaluronoglucosaminidase [EC:
3.2.1.35
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke00531
Glycosaminoglycan degradation
oke01100
Metabolic pathways
oke04142
Lysosome
Module
oke_M00076
Dermatan sulfate degradation
oke_M00077
Chondroitin sulfate degradation
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
118360435 (si:dkey-72l14.3)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
118360435 (si:dkey-72l14.3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
oke02042
]
118360435 (si:dkey-72l14.3)
00536 Glycosaminoglycan binding proteins [BR:
oke00536
]
118360435 (si:dkey-72l14.3)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
oke00537
]
118360435 (si:dkey-72l14.3)
Enzymes [BR:
oke01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.35 hyaluronoglucosaminidase
118360435 (si:dkey-72l14.3)
Bacterial toxins [BR:
oke02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
118360435 (si:dkey-72l14.3)
Glycosaminoglycan binding proteins [BR:
oke00536
]
Heparan sulfate / Heparin
Enzymes
118360435 (si:dkey-72l14.3)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
oke00537
]
Enzymes
118360435 (si:dkey-72l14.3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_56
Motif
Other DBs
NCBI-GeneID:
118360435
NCBI-ProteinID:
XP_035595582
LinkDB
All DBs
Position
28:complement(39740684..39746889)
Genome browser
AA seq
512 aa
AA seq
DB search
MAWTELELRAGLRAGPHRALLPLLLQGLMLLTSPCLGGPPQPARTPLSPGQPFLVLWGIP
NKACPGRPDPGAFGMEREGHVSMFYEDTLGKYPYYTNQDQPVNGGLPQHTRLDGHLQKTG
EDLAAALPSIGYQGLGVLRWGQWSPQWGRNREKQGIYLEGSRALLRTFFPDWTTEEVEKW
SQVDFEAASQSILMETLWEVRRLRPKALWGVTPYPNCYNSGPAQSLSNYTGRCPAAEMAL
NDELLWLWKCCSALYPALTLEKLQGGTSGARLYTSNQIREALRVASLAGTAYDLPVFPLV
RSVYTSTNTFLSEVDLVNTIGESAAMGAAGVVLWEKDQGVFSTRTQRACSELAAFVREVL
GLYAVNVTTAARLCGVSLCQGRGRCVRRKPESSAYLHLPPSNFVMTQGKVEGVQATGQLD
PGNLEAWKRDFQCQWYESLEGAVADEELPKDRAQGVLPPTLNSPLSSELNQGTRPNLALS
DHSGPSLKAPLLPLLLVLATALRLNTDLCLKL
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggcgtggactgagctggagctccgggccgggctcagagctgggccacacagggcccta
ctaccactcctcctccagggattgatgctccttacatccccctgccttggtggtccccca
cagccggcacgcacccctctgtcaccagggcagccttttctagtactatggggaatcccc
aacaaggcgtgtcctggacgacctgacccaggagcctttgggatggagagagagggccac
gtgtccatgttttatgaggacactctggggaagtacccctattacactaaccaggaccag
ccggtgaacggaggccttccccaacacaccagactggatggacaccttcagaagacaggg
gaggacctggcggcagcgctaccatcaataggttaccagggcctgggagtactgcgttgg
ggccagtggtccccgcagtggggtaggaaccgtgagaaacagggcatctacctggagggc
tccagggctctgctgaggaccttcttccctgactggaccacggaggaggtggagaagtgg
tctcaggtggactttgaggcagcgtcccagtccatcctcatggagacgctgtgggaggtg
aggaggctccgccccaaggctctgtggggcgtgaccccataccccaactgctacaactcc
ggccccgcccagtcgctgtccaattacacgggtcgctgtcccgccgccgagatggcgttg
aatgacgagctgctgtggctctggaaatgctgctctgctctctaccccgccctcacacta
gagaagctgcagggtgggacctcaggggccagattgtacacgtccaatcagatccgagag
gcactgagagtggcaagcttggccgggaccgcctacgaccttcctgtgttcccattggtc
aggagtgtctatacatcgaccaatactttcctgtctgaggtggacctggtcaacaccatt
ggtgagagtgctgccatgggggcagcaggggttgtcctctgggagaaagatcaaggtgtc
ttctctacaaggactcagagagcctgctcagagctggccgcgtttgtgcgtgaggtcctg
ggcctttacgccgtcaacgtgaccacggccgcccgcctgtgcggcgtctccctgtgccag
gggcgtggccgctgcgtgcgccgcaaacccgagagctccgcctacctgcacttgccgccc
tccaacttcgtgatgacgcaggggaaggtggagggggtgcaggccacaggccagctggac
cctggcaacctggaggcctggaagagggacttccagtgccagtggtatgagtccctggag
ggggcagtcgccgacgaggagctccccaaggacagggcacagggagtccttccccccaca
ctgaattcccccttgtcgagtgagctgaaccaagggaccaggcccaacctcgctctgtca
gaccacagcggaccatcactcaaggcaccgctcctacctctactgctggtattagccaca
gctctacgcctgaacacagacttatgtctgaagctctga
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