Oncorhynchus keta (chum salmon): 118373789
Help
Entry
118373789 CDS
T09424
Symbol
esr1
Name
(RefSeq) estrogen receptor isoform X1
KO
K08550
estrogen receptor alpha
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118373789 (esr1)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
oke03310
]
118373789 (esr1)
Transcription factors [BR:
oke03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
118373789 (esr1)
Nuclear receptors [BR:
oke03310
]
3. Estrogen like
3A. Estrogen receptor
118373789 (esr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Oest_recep
Motif
Other DBs
NCBI-GeneID:
118373789
NCBI-ProteinID:
XP_035615921
EnsemblRapid:
ENSOKEG00005046927
LinkDB
All DBs
Position
8:complement(23525841..23552881)
Genome browser
AA seq
627 aa
AA seq
DB search
MLVRQSHTQISKPLGAPLRSRTTLESHVISPPKLSPQQPTTPNSNMYPEETRGGGGAAAF
NYLDGGYDYTAPAQGPAPLYYSTTPQDAHGPPSDGSMQSLGSSPTGPLVFVSSSPQLSPQ
LSPQLSHFLHAPSHHGLPSQSYYLDTSSTPLYRSSVVTNQLSASEEKLCIASDRQQSYSA
AGSGVRVFEMANETRYCAVCSDFASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCT
MDRNRRKSCQACRLRKCYEVGMVKGGLRKDRGGRVLRKDKRYCGPAGDREKPYGDLEHRT
APPQDGGRNSSSSSLNGGGGWRGPRITMSPEQVLFLLQGAEPPALCSRQKVARPYTEVTM
MTLLTSMADKELVHMIAWAKKVPGFQELSLHDQVQLLESSWLEVLMIGLIWRSIHCPGKL
IFAQDLILDRSEGDCVEGMAEIFDMLLATVSRFRMLKLKPEEFVCLKAIILLNSGAFSFC
SNSVESLHNSLAVESMLNNITDTLIHHISHSGASVQQQPRRQAQLLLLLSHIRHMSNKGM
EHLYSIKCKNKVPLYDLLLEMLDGHRLQSPGKVAQAGEQTEGPSTTTTTSTGSSIGPMQG
SQDTHIRSHGSGVLQYGSPSSDQMPIP
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgctggtcagacagtcccatacgcagatttccaaacctctcggagctcctctcagatcc
cgaacgaccctggagagccacgtcatctcccccccaaaactctcaccacagcagccgacc
acccccaacagcaacatgtaccctgaggagacacgcggaggtggtggggcggccgccttt
aactacctggacggagggtatgactacacagcccctgctcaaggcccggcccccctctat
tactccacaaccccccaggatgcccacggacccccttcagatggcagcatgcagtccctg
ggcagcagtcccaccggcccactggtgtttgtgtcctccagcccccagctcagcccccag
ctcagcccccagctcagccacttcctccacgccccaagccaccatggtctccccagccag
tcatactacctggatacctcgtccacacccttatacaggtcgagtgtggtaaccaatcag
ctgtcagcgtcagaggagaagctctgcatcgcctctgataggcagcagtcgtacagtgca
gcagggtcaggggtcagggtgtttgagatggccaacgagacgaggtactgtgcggtctgc
agcgactttgcctctgggtaccactacggagtttggtcctgcgagggctgcaaagccttc
ttcaaaaggagcatccaaggtcacaatgactacatgtgccctgcgactaaccagtgtaca
atggacaggaatcgtaggaagagctgccaggcatgccgcctcagaaagtgttatgaagtg
gggatggtgaaaggaggcttgcgtaaggaccgcggtgggcgggttctcaggaaggataag
cggtattgtggccctgctggtgacagagagaaaccctacggtgacctggagcacaggaca
gcgccccctcaggacgggggtaggaacagcagcagcagcagtctcaatggtggtggagga
tggcgtgggcccagaatcaccatgtctcctgaacaggtgctattcctgctgcagggggca
gagcctccggccctgtgttctcgtcagaaggtggcccgcccctacacagaggtcaccatg
atgaccctgctcaccagcatggctgacaaggagctggtgcacatgatcgcttgggctaag
aaagtaccaggtttccaggagctgtctctccatgaccaggtgcagctgctggagagttcc
tggctggaggtgctgatgatcggactcatatggcggtccatccactgccctgggaaactc
atcttcgcccaggacctcatactggacaggagtgaaggggactgtgtggagggtatggct
gagatcttcgacatgctcctggccactgtgtctcgcttccgcatgcttaaactgaagcct
gaggagtttgtgtgcctcaaagccatcatcttgctcaactctggtgccttctccttctgt
tctaactctgtggagtccctccacaacagcttggcagtggaaagcatgctgaacaacatc
accgacaccctcatccaccacatcagccattcaggagcctctgtgcagcagcagcccaga
cggcaggcccagctcctgctcctgctctcacacatcagacatatgagcaacaaaggcatg
gagcacctttacagcataaaatgtaagaacaaagttcctctgtacgacctgctcctggag
atgctggacggtcaccggctccaatccccaggcaaagtggcccaagctggggaacagacc
gagggcccctctaccaccactaccacctccacaggctccagcatagggccgatgcaaggc
agccaggatacccacatcagaagccatggttccggggtactccagtatggctcccccagc
tcagaccagatgcccattccgtga
DBGET
integrated database retrieval system
