Oncorhynchus keta (chum salmon): 118376057
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Entry
118376057 CDS
T09424
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C-like
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04020
Calcium signaling pathway
oke04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
118376057
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
118376057
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oke04040
]
118376057
Ion channels [BR:
oke04040
]
Ligand-gated channels
Glutamate (ionotropic)
118376057
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
NMDAR2_C
DUF3432
Motif
Other DBs
NCBI-GeneID:
118376057
NCBI-ProteinID:
XP_052348892
EnsemblRapid:
ENSOKEG00005017129
LinkDB
All DBs
Position
3:20331136..20447627
Genome browser
AA seq
1413 aa
AA seq
DB search
MGLLPGQPPPFLLRFILFLSSLSPLLSRPLILHPSVNVAVMFSGSAYQNEVRGRLSRENF
ADLPLEVNPVTVLVNDTNPRALLTRLCQTMATEKLHGVVFEDDVGSGAGPQVAEVAQILD
FLSTQTALPIIGISGGSAVVIPHKAEGSTFLQMGASLEQQIVCMFKLMEEYDWGDFVVIT
SMLPGYETFVDYVRSYTDTSYFLWRLQDILSLEMSIGTSDVRAKRMLQQIDSQVLVAYCS
HEEAQYLFQVAGEVGLLGPGYIWILPSLALGNTESPSPSSFPIGVIGVITDQWRKSLRQR
VREGVAIVAKGAESFKRHQGFVPEGHSDCSTPVTHINNNTLFRHMLNVTWERKDLSFNSD
GYLTNPSMVIIALNRDRQWDKVGTLERGILQVRYPVWPRYGSFLEPVSDDRHLTVATLEE
RPFVIVENVDPDTGTCVRNTVPCRRQSNRTESLVGHSEPYTKLCCKGFCIDILKKLSRTI
KFSYDLYLVTNGKHGKMISGIWNGMIGEVFYRKADMAIGSLTINEERSEIIDFSVPFVET
GISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVTVFVFEYFSPVGYNRSLVSA
KAAGGPTFTIGKSVWLLWGIVFNNSVPIENPKGTTSKIMVLVWAFFAVIFLASYTANLAA
FMIQEQYIDTVSGLSDKKFQKPQEHYPPFRFGTVPNGSTERNIRSNYPDMHAHMVKYNQK
GVEDALNSLKTAKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQKDSRW
KRPIDLALLQFLGDGDTQRLETVWLSGICQNEKNEVMSSKLDIDNMAGVFYMLLVAMGLS
LLVFSWEHLLYWKLHKELDKSPRMDFLLAISRGIYSCFNGVEEPDLPNLANPDLTANYAQ
ANMLKMLRTAKDLVNSAQVETSLDHASKTIEHWGLHGGSLPVHIPQQGTTETVPGGFAYV
TENTHLPPERPLSPQYCMLGSGTSVNQQRGLARPTPLRYTLPARTSSLYDRPLPVSSLIC
PHLDLAGGDRLSSYPHSSTGRLYVDPQHLSHPRSPFIPYSELQLPDIYLSSHPPSAVSHP
PHTEPSKRKRRSKSLLSGERGRGGGQRRRRREEKTVCLAELRANHLQENHVSPHMPDSLY
PGAVLCPGEEGCGDSWPLPLEELVLAGRRRRHRRPSFLRATWGSEQIRQPDDTPPTSLDS
QSHSALPDLFPRVMVDQETPTKLYNPTPFRNNLCYPAASPRQHAYLHIRQDQRKGNSRKK
LRHSHSTHLPTYREAVLGGQGGGGGVGLGVVRRTTSLLSRQYNDNLTSYPGLPLYHSPLN
FQTYSPASSNHPSPGTYRIPSPVCQLLACGGGCRSQRGLLYQDSLYGAYGAYGGAQDPDI
EPQRGEGLVGLRSEDRPCVTRPWGKVSSLESEV
NT seq
4242 nt
NT seq
+upstream
nt +downstream
nt
atgggtcttcttccaggacagcctcctcctttcctcctccgcttcatcctcttcctctcc
tccctttctcccctcctctcccgtcctctcatcctccatccttctgttaatgtagcagta
atgttcagtggctctgcttaccagaatgaggtcaggggtcgtttgagcagagagaacttc
gctgatcttcctctagaggtgaacccggtcactgttctggttaatgacaccaaccctcgc
gccctgctgacgcgtctctgtcaaaccatggccacagagaaactgcatggagtcgtgttc
gaggacgatgtgggatcaggagctggacctcaggtggcagaagtggctcagatcctggac
ttcctgtcgactcagacagctctacccatcattggcatcagtggaggatctgccgttgtc
atacctcacaaggctgagggttccacgttcctccagatgggtgcatcactggaacagcag
attgtctgcatgttcaagttgatggaggagtatgactggggagactttgtagtcatcaca
agtatgttgccgggatacgagacgtttgtggactacgtccgctcctacacggacacttcc
tacttcctgtggaggctgcaggatatcctgtctctggagatgtctatcgggaccagcgac
gtccgcgcaaaacgcatgttacagcagattgattcccaggtactcgtagcctactgctcc
catgaagaggcccagtacctgttccaggtagcaggggaggtgggtctattggggcctggc
tacatctggatcctcccctccctcgcgttgggcaacacagagagcccttcacctagcagc
ttccccattggagtgattggcgtcatcaccgaccagtggaggaagagcctgaggcagcgg
gtcagagagggagtggccatagtggccaaaggggcggagagtttcaagaggcatcagggg
ttcgttcccgagggacacagcgactgcagcacaccagttacacacattaacaacaacaca
ctgttcagacacatgctgaacgtgacatgggagcgtaaggacctgtcgtttaatagtgat
ggttacctgacaaacccttccatggtcatcatcgctttgaacagagacagacagtgggac
aaggtggggacattagagcggggtatcctccaggtgcgttatccggtgtggcctcgatat
ggtagtttcctcgagccggtatcagatgatcgccacctgacggtagccactctggaggag
aggcccttcgtcatcgtagagaacgtggaccccgacacgggaacctgtgtacgcaacacc
gtgccctgccgacgccagtccaaccgcaccgagagtcttgtgggtcactcggagccctac
accaagctgtgctgtaaggggttctgcatcgacattctgaagaagctgtctcgcaccatc
aagttctcctacgacctctacctggtcactaacgggaaacatggaaagatgatcagtggc
atctggaacggcatgatcggagaggtgttctacaggaaagcagacatggccataggttct
ctcaccataaatgaggagcgttctgagattattgacttctctgtgccattcgtcgagacc
ggtatcagcgtcatggttgcccgtagcaatgggactgtctccccctccgccttcctcgag
ccctatagcccagcggtgtgggtgatgatgtttgtaatgtgcctgaccgtggtagctgtg
accgtattcgtgttcgagtacttcagtcctgtcggctacaaccgcagcttggtcagtgct
aaagcggcaggaggtcctaccttcaccatagggaagtcagtgtggttgctttggggcatc
gtgttcaataactcagtccccatcgagaaccctaaaggaaccaccagtaagatcatggtg
ctggtgtgggccttcttcgcagtcatcttcctggcctcctacactgccaacctggctgcc
ttcatgatccaggagcagtacatagacactgtgtctggactgtctgacaagaagttccag
aagcctcaggaacactaccctccattccggtttgggacggtccctaacggcagcacagag
aggaacatcaggagtaactaccccgacatgcacgcacacatggtcaaatacaaccagaaa
ggagtggaggatgccctcaacagccttaagacagcgaagctggatgcttttatctatgat
gctgcggtgttgaactacatggcagggaaggacgagggctgtaagcttgtgactattggc
tctgggaaggtgtttgctacaacgggctatggtatcgccctgcagaaagactctcgatgg
aaacgaccaattgacctggccttattgcagttcctgggagatggtgacacccagcgcttg
gagacggtctggctgtcaggcatctgtcagaatgagaagaacgaggtgatgagcagtaag
ctggacatagacaacatggccggggtcttctacatgctgctggtggccatggggctcagt
ctgctggtgttctcctgggaacatctactctactggaaacttcacaaggaactagacaaa
tctcccaggatggacttcctgctcgccatcagcaggggtatctacagctgcttcaacggg
gtggaggaaccagacctccctaacctggccaacccagacctgacagctaactatgcccag
gctaacatgctcaagatgctacgcactgctaaggacctggttaactccgcccaagtcgag
acctcactggaccacgcctccaagaccatagaacactggggactccatggcggcagcctg
ccagtccacattccgcagcaaggcaccacggaaacagtcccgggagggttcgcttatgtc
acagagaatacacacctgccccccgagcgccccctcagcccacaatactgcatgctgggt
tcagggacatctgtgaaccagcagagggggctggcgagacccacaccgctacgatacacg
ctcccggctcgtacttcctctctctacgacagaccacttcctgtttctagtctcatttgc
cctcaccttgacctggctgggggggatcgcctctcatcttatcctcactcctccacaggt
aggctctatgtggacccccaacacctttctcacccccgctctcccttcatcccctatagt
gagctccagctcccagacatctacctctcctctcacccaccctctgctgtctcccatccc
ccccacacagagccctccaagaggaagaggaggagcaagagcctcctctcaggggagaga
ggaagaggaggaggacagaggaggcggcgcagggaggagaagaccgtgtgcctggctgaa
ctccgggccaaccacctccaggaaaaccacgtctcgccccacatgcctgactccctgtac
ccaggagcggtgctctgtcctggggaagagggatgcggtgactcctggcctcttcctctg
gaggagctcgtccttgcagggagacggcggcgccaccgacggccatctttccttcgagcc
acctggggcagcgagcagattcgccagcccgacgatactccgcctacatccctcgatagc
caatcacattctgctttaccagacttatttccccgcgtcatggtcgaccaagaaactccc
actaaactctacaaccccaccccgttccggaacaacctatgctatcctgccgcctcaccc
cgccaacatgcctatcttcatataaggcaggaccagaggaaaggaaactcgcgtaagaag
ctgcggcactcacactccacccacctgcccacctacagggaggccgtgctggggggccag
ggagggggaggtggggtaggcctgggggtggtccggagaaccaccagcctgctcagcaga
cagtacaacgacaatctaacctcctaccctgggctgcctctataccacagccccctcaac
ttccagacctattccccggcatccagcaaccaccccagccccggtacctaccgtatcccc
agccctgtatgccagctcctggcctgtggaggtggctgtcgaagtcagagggggttgttg
taccaggacagtttgtatggagcctatggagcctatggaggggcccaggatccagacata
gagccccagagaggagagggcttggtagggttgaggtctgaggacagaccctgtgtaact
cggccctggggaaaagtctctagtctggagtcagaggtctga
DBGET
integrated database retrieval system
