Oncorhynchus keta (chum salmon): 118377271
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Entry
118377271 CDS
T09424
Symbol
gad1b
Name
(RefSeq) glutamate decarboxylase 1b isoform X1
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke00250
Alanine, aspartate and glutamate metabolism
oke00410
beta-Alanine metabolism
oke00430
Taurine and hypotaurine metabolism
oke00650
Butanoate metabolism
oke01100
Metabolic pathways
Module
oke_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
118377271 (gad1b)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
118377271 (gad1b)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
118377271 (gad1b)
00430 Taurine and hypotaurine metabolism
118377271 (gad1b)
Enzymes [BR:
oke01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
118377271 (gad1b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Beta_elim_lyase
SepSecS
Chlam_OMP3
Motif
Other DBs
NCBI-GeneID:
118377271
NCBI-ProteinID:
XP_052332415
EnsemblRapid:
ENSOKEG00005044497
LinkDB
All DBs
Position
23:13894813..13930377
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AA seq
588 aa
AA seq
DB search
MATSEPTATGGDQDPNSANLRPSSTNYDAWMQGCTRKLGLKICGFLQKNNSLGEEGRLAG
SLSERQKNLYSCDNSDRDARFRRTETDFSNMFARDLLPAKNGEEATMQFLLELVGILTNY
VRKTFDRSTKVLDFHHPHQLLEGMEGFNLELSDQPESLEQILVDCRDTLKYGVRTGHPRF
FNQLSTGLDIIGLAGEWLTSTANTNMFTYEIAPVFVLMEQLTLKKMREMIGWPSGEGDGI
FSPGGAISNMYSVMIARYKYFPEVKTKGMAAAPRLVLFTSEHSHYSIKKAGAALGFGSEN
VVLLSTDERGRVIPADLEAKILDVKQKGYHPLFVNATAGSTVYGAFDPINEIADICEKYD
MWLHVDGAWGGGLLMSRKHRHKFSGVERANSVTWNPHKMMGVPLQCSAILVREKGILAGC
NSMCAGYLFQPDKQYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKGTIGFEQHIDKCLDLS
QYLYDKIRNRQGYEMVFQGVPQHTNVCFWYIPPSLRGLEHNSVEYREKLHKVAPKIKAMM
MESGTTMVGYQPQGQKVNFFRMVVSNPAALQSDIDFLIDEIERLGHDL
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggccacgtctgaaccgacagccactggcggggaccaggaccccaactcagccaattta
cgaccttcgtctacaaactatgacgcgtggatgcaaggctgcacgcggaaactgggtttg
aagatctgtgggttcctgcaaaagaacaacagtctcggggaggaaggccggctcgcaggc
tcactctcagaacgccagaagaacctgtattcctgtgacaacagcgaccgggatgcccgt
ttccgtcgcactgagaccgatttttccaacatgttcgcgagagacttacttcccgccaaa
aacggagaagaggcgactatgcagttcttgttggaacttgtgggcatcctcaccaactac
gtcaggaagacgtttgaccgttccaccaaggttctggacttccaccaccctcaccagctg
ctcgagggcatggaaggattcaacctcgagctctctgaccagccagagtccctcgagcag
atcctcgtggactgcagggacacgctcaagtacggcgtgcgaacaggtcatccacggttc
ttcaaccagctgtctacggggctggacatcattgggctggctggggagtggctcacctcc
acagccaacaccaacatgttcacctatgagatcgctccagtgtttgtcctgatggagcag
ctgacgttgaagaagatgagagagatgattggctggccctcgggagagggggacggcata
ttctcaccagggggcgccatctctaacatgtacagtgtgatgattgctcgctacaagtac
ttcccagaggtcaagaccaagggcatggctgccgctccccgcctggtgctcttcacatca
gaacatagccactactctatcaagaaggccggggcagctctgggctttggttctgagaac
gtggtcctgttgagcacagatgagagggggagagttattcctgctgatctagaagctaag
atccttgatgtcaagcagaagggttaccatcctctgtttgtgaatgctacagctggttct
acagtctacggagcatttgaccccatcaatgagatcgctgacatctgtgaaaaatacgac
atgtggctccacgtagacggtgcatggggaggtggtcttctgatgtccaggaagcatcgc
cataagttcagcggagtagagagggctaactctgtcacatggaatcctcacaagatgatg
ggagtgcctctacagtgctccgccatcctagtcagagaaaagggtattctggcaggctgt
aactcgatgtgtgctgggtacctgttccagcccgataaacagtatgatgtcagctatgac
acgggagacaaggccatccagtgtggccgacacgttgacatcttcaagttctggctcatg
tggaaggccaagggcactatagggtttgagcagcacattgacaagtgtctggacctgtct
cagtacctctacgacaagatcagaaacagacagggatacgagatggtgttccagggagtg
ccccagcacaccaacgtgtgtttctggtacatcccacccagtctgagaggcttggaacac
aacagtgtggagtatcgagaaaaacttcacaaggtggcgcccaagatcaaggcaatgatg
atggagtcagggacgaccatggtgggctaccagcctcagggccagaaggtcaatttcttc
cgcatggtcgtctccaaccccgcagccctccagtcagacatcgacttcctcattgacgaa
atcgagaggctggggcatgacctgtaa
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